Array 1 150747-148940 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTZ01000005.1 Prevotella sp. R5064 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 150746 32 100.0 33 ................................ ACGTTGGTAATTTCGTTGACGATACCGTTGGAT 150681 32 100.0 34 ................................ CGTGATACCTATCATATCAATGTCGACGCAGCTC 150615 32 100.0 35 ................................ CCTTAATTTAACGTTATGAAACAGATTGATTATAA 150548 32 100.0 35 ................................ TACAGTTGCTAATTCTATATTCGCAGGTCTGCAGA 150481 32 100.0 34 ................................ TTGCAAACAATCATCTCGCAACCGTACATCCTCC 150415 32 100.0 33 ................................ CTCAGTCTTTAAGATAGATTCTATTGAGCGAGT 150350 32 100.0 33 ................................ CGTGACTTTGTCTATGATTGCTGGTCGTTGCGA 150285 32 100.0 33 ................................ TCATTCCGCAATGTCGACTTTACCAATTTTACA 150220 32 100.0 33 ................................ ATAGTTCAGATGAACGACTATCGTTCATCGCTA 150155 32 100.0 35 ................................ TCAATTCTATCGGTCAGCCAAGTGTTGGTACTTAT 150088 32 100.0 33 ................................ CGACTATTTTAACCCGCTCTATCAGCGACTCGG 150023 32 100.0 33 ................................ TCAATCTCACTCTGGTTATCGTTCTACCCCCCT 149958 32 100.0 35 ................................ TTTACCTGATTATGCTGTAAACCTTTTTCGGCTTG 149891 32 100.0 34 ................................ AGACTCGAGAAGAAATCAAGAACGTTGCTGAAGA 149825 32 100.0 35 ................................ TAATCTTCCTTACATACTTACGCTCCGTCCGTGGC 149758 32 100.0 35 ................................ AGATTCCAAAGGCGCATTTGTTTCTTCTGCCTTTC 149691 32 100.0 33 ................................ GTACTAAACGAGATGATTTTAGCGTTCGTGTAT 149626 32 100.0 33 ................................ TGCAGTCTTGTGGAAAGTATCGCCATAATGACC 149561 32 100.0 32 ................................ AATCTTCGCAGGACTGCAGACACGAGAGCAAA 149497 32 100.0 33 ................................ CCTGTCCTTTAACGACAACAAAAAGCGGTGCAA 149432 32 100.0 36 ................................ AGACCTCAATAATGTTTGCATTATGACGCAGTGGCC 149364 32 100.0 34 ................................ TGCAAAGCGAGCGTCAGGATTTCGGAACTTACGA 149298 32 100.0 34 ................................ TACCATCAACAACAGCTATTTTGTGAATCATAAA 149232 32 100.0 33 ................................ AACCGTCTCAAAGCATCCACAAATCTCCCTACG 149167 32 100.0 32 ................................ ATTTTTCAGACAAAAGTGCCTACCTTTGCAGC 149103 32 100.0 33 ................................ TTGTCCGAGTCGCTAAATTGTCCGGGCTTGCCA 149038 32 100.0 35 ................................ TTTTCCGCAAAGATAGTCTATATCATGTGTTGTGA 148971 32 93.8 0 ....................A........G.. | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 99.8 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ACATCTATCCGTTTCCTGGCCTTGGACTTGCTTCTCTCGTAGGCGTTGCCCACAATATCAAGTTTTTCCTCCTCGACAAGTCTGGCCCAGTACGCATGCACTCTGTCACGAACCACTTCCGAGTAACCTTGCAGTTTCTCATCCCAAAGTTGGACATCCTTCTGGTGATTGTACAGATACGTCAGTCCACGCGCAACATCTCTTATCTGCTCTGGGGATAGGTCATGTATAAACCCGACATTGAGCAATATCAAAGTACATACCCTACCGCTGGCATCGCGATAGGACTCCTTCAGACGGTAATACTTCTCGTCTTTACACGTCTGTGGGTTGTAACGTATTTGGGACGTAAAATTCATGCCGCAAAGATAAGCAATCCCTACGACATTGCTGTGTTCTACATTGCGATTTTGAGCAGTTTGACCACGCAAACCCCTATAAACACTGGAAAAAATTCTGAAAAAAAACATTAGAGCGTCAAACTTGGGTTAACACTAATT # Right flank : CACCTACACTCAGATTCTTGAAAGATAGAAGATTTTGTATGTGCGTGCAGAATACTATAGGAATCCCTCGCACAAGCCTCAAGGCTGCAAGGAACAGGCAAATCCTTTGCGGAATCTTTGCGACCTTTGCGACTTGGCGAGATTTTTTCGGAGCAAGAGGATGGGGATATAACAAATCTTTGCAACCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGGGATTTTTCGTGGTAAGGGAATGGGGATAGAACGAATCTTTGCGACCTCTGCGACTTGGCGGGATTTTTCGAGGCAAGGGGATGAGGATAGAACAAATCTTAGCGAGCGTGGAGCTTGGCGAGGGGGCTTTCGTGGCTGGAGGACGGTGATAGACGCAGTGAAAGGGTATTAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 156673-152883 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTZ01000005.1 Prevotella sp. R5064 sequence05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 156672 32 100.0 34 ................................ TGTCATGAATACCTTTTCGCCACGTTTCAATCGG 156606 32 100.0 33 ................................ ATTTATGTCAAAAAACAACATCCCGCCTCTTTT 156541 32 100.0 32 ................................ TATCGGTCAGCCCTCTGTTGGTTCATATCAAT 156477 32 100.0 35 ................................ CGACTATTTCAATCCGTTATATCAGCGACTTGGAC 156410 32 100.0 34 ................................ GTATTCTCTTGATGACCTCGGCACGTCCGCACCT 156344 32 100.0 34 ................................ CGGGACACCTATCATATTAATGTCGACGCAGCCC 156278 32 100.0 34 ................................ TTGATGATCTCGGAGGTAACGCACTTGTCGGTGC 156212 32 100.0 32 ................................ TGCTGCCGTTGCATCATATGTTAGTAGCTACG 156148 32 100.0 34 ................................ CTTTTTGACGACCCGAACCTTTGTACGTCATTGT 156082 32 100.0 34 ................................ CGAAGAACCCTGCTACTGGTGTTCGTGATGACCT 156016 32 100.0 34 ................................ ATGATACGTATCACGTTAATGTCGATGCAGCCCA 155950 32 100.0 35 ................................ TTCACCGTGGCTTATGTAAGTCCGTTGAAAGTGGT 155883 32 100.0 34 ................................ CTATGTAGCTGTGATAGTCCTGACTCTGTGTCTA 155817 32 100.0 34 ................................ TAATCACTGGTTGCCTACCGTTCATACTTTCAAA 155751 32 100.0 34 ................................ TCCCCGTCCGTTTTATCGGGCTTATGGGCGTGGT 155685 32 100.0 34 ................................ CTCCTGCGTCAAGAAGGCATTATCCCGGTGGTCC 155619 32 100.0 35 ................................ CAACAGTGAAGTGAGTAATCTAATAGGCACGAATG 155552 32 100.0 34 ................................ AACATTTCCACCTCTGCCAGTCCACTGGCTTCAC 155486 32 100.0 33 ................................ ACGCTGTCAAAGAGATTATTAATACGTTTCACA 155421 32 100.0 34 ................................ AGCGAAGCAGGACATATTACAAGCACTGGCCACG 155355 32 100.0 35 ................................ TTAGCCAGTTCGAAGCAGGCATTGCGTGCGTAGAT 155288 32 100.0 35 ................................ AGGATAACGGATATTGTCGATTAAGTGAGTATAAT 155221 32 100.0 34 ................................ ACTACGTGCTGTCGATGCAATTTGTTGAGCGCAT 155155 32 100.0 33 ................................ AAGGGAACAGAAAAGACCGTTGCCGACTTGTCC 155090 32 100.0 35 ................................ AGTCCACACCTATTTTGTCACATAGACCCCCCAAA 155023 32 100.0 34 ................................ TACGCTGCGCTGCGCTTGCGTCCTCAGCCACTAA 154957 32 100.0 35 ................................ TTTGCTAAATAGTTTTGGTATATACTTAAATTATA 154890 32 100.0 34 ................................ AATTCGAATTTAAGATTGTTCTCAGCCATAAAGT 154824 32 100.0 34 ................................ CTCTATCAGCGGCTCCATACGTCCCGCCGCCCAG 154758 32 100.0 34 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGTG 154692 32 100.0 33 ................................ TGACAGAGCTGCAGAGGCCATCGAGAATCACAT 154627 32 100.0 34 ................................ ACTCCTTGCTGGTCTTGATACTCTCCATAATGGA 154561 32 100.0 34 ................................ CTGTGTGCTCTGTCCTCTGCCTGGCAACAATCAG 154495 32 100.0 34 ................................ TTCCTGGGCCTCGGCTATTTCCTGCTTCTTCACA 154429 32 100.0 35 ................................ CGGATAATTGGGATAGCCGTAGCCAACACCCCAAC 154362 32 100.0 34 ................................ CGCATCCGGCTGGAGGCTATCGAACTCTACGAAT 154296 32 100.0 34 ................................ AGTAGCTCAACTGGATAGAGCAACTGCCTTCTAA 154230 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 154164 32 100.0 34 ................................ ACAAAGGAACGTAGTTTAACGAAGAAAGACTGCG 154098 32 100.0 34 ................................ ATTAATACGTATAATTATGATTACAACTAATGAC 154032 32 100.0 34 ................................ AACTTAGAGCTGTCTACGCTTGTGCGTGTAGTCG 153966 32 100.0 34 ................................ CTTAATATGGCTTGATTTGTTAGCACCTCCGCAG 153900 32 100.0 32 ................................ AATTATCTAAAGATTATGCGCCGACATGCTGA 153836 32 100.0 33 ................................ TTAAACTCACGTCTCCAGTTCTCTTTCAGCGAA 153771 32 100.0 33 ................................ CCTTTAGTATGCGTAGTAAGTAACCTTGATACC 153706 32 100.0 33 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGT 153641 32 100.0 35 ................................ TTTTCCTCTGCGTCTATATAAGACTGCATCGTATC 153574 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 153508 32 100.0 33 ................................ ATAAAGGAACGCTACACAGGCAAGGACAAGGAC 153443 32 100.0 33 ................................ ATGTCAGACATGCAGCAGACATAACGAGAGGGG 153378 32 100.0 33 ................................ TTGTTTCTCCGTTAATTACGACGGTTCACTTCT 153313 32 100.0 34 ................................ CGCCATAGGAACTTGACTTAATTTTTTGGAAAGA 153247 32 100.0 36 ................................ AAAAGGTCAAGACCATAGTTACGATACCGAGGTTGT 153179 32 100.0 32 ................................ TGTACTGAATCTTCTAATTGGTCACAAGTGGC 153115 32 96.9 36 ........T....................... TGCGTCAACTAAGATTCTCTACCCCCGAGCGGAGAC 153047 32 100.0 34 ................................ AAATCACGGAACGCACCCACCTTTAGGTTTGGCA 152981 32 100.0 35 ................................ CTCGACCTTCCTGTGTGTTTCCTTTGGCTCGTACA 152914 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 58 32 99.9 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ATATGTTCGTACTGGTTACTTATGATGTGAATATCACATCGCCTTTAGGACAAAACCGACTCAGACAGGTTGCTAAAACATGTCTTAACTACGGAAAGCGCGTTCAAAATTCTGTATTCGAATGCGTCCTGACTGAAGCTCAATTTGTACTGCTAAAGGATAAGCTGTCTGAAATAATAAGTCAATCGGATGACAGCATTTGTTTCTATAAATTAGGTAACAATTGGAAAAGACATGTAGAAAGAATCGGCAAGGACACGTCAGTCGATGTGACTGACGTCTTAATATTATAATGCACTTCACCCATACTTACTCTCAGAATGATTTCGTTTATGCGAACCCTAACCGTTGCACTAAAAGCAGGAATTTTCGCAGAGACTAATACACAGGCAGTTAAGCTTTTTGAAAGGACAATATGCATTTAAATAGCTATGCTTTTCGCCATGTTCGCAAAATATAGTAACTTTGCCTCTGATTATTAGGCAATTGTCTAATAAGCG # Right flank : AGCCCCTCTATATGTATGAACTTAACCCAACTTTGACATCGTATTTTGCTTAGTTGTTCTGTATCAGCAATTTAGTGTTTTTAAAAAGTCCTACTGTGTTCTACAGATTTTTATTTTTTTAAATGGCACTTTACTGATTTTCAACAACTCGTAGATTTCAGCTGCACTATCTGTAGGCACACTGCACAGTCTGGTCTCGACAGCCTCTCCAAGCGCATTTACTGCTGTGGTAGTAACTGCTTTTTGAGTCTTCATGATCCGCATGATCTCCGACCAGTACGGTGTCGAACGCTCCCGCCCATGCTCATCCTTGCCTTGCTTTCGCCGGGCAACCTTCATCTGATGGCGCACGGTGTTTACTATCCAGTAAGCCAGCAGCCCTAAGAAAAGGTGTGCGTCTGCCCTATTGTCAGTCTGGTGGTATATGGGCCTGAGGCTGAGGTCGGTTTTGAGCTGCCGGTTGGAGCATTCTATTTCACGTATAAGATTATAGTAGTTCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 187360-191063 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTZ01000005.1 Prevotella sp. R5064 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 187360 36 100.0 30 .................................... TGACCGACAGAGTTCAAGAATGGGCCATAT 187426 36 100.0 29 .................................... ATATAGTGAAAATATAGAAACAAATAGTG 187491 36 100.0 29 .................................... GAGTATATGCAACTAACTCAACATTAAGA 187556 36 100.0 29 .................................... TGGACGAGGTCGTCACGTACTCCAGTTGC 187621 36 100.0 30 .................................... CTGTAGTCATCGAGACATAAGAACCTTCAG 187687 36 100.0 29 .................................... AAGATTTGTTAACAAATCCAGTCCGTAGT 187752 36 100.0 29 .................................... CGCAGGATGCTCATATAGCTCAGACCTGG 187817 36 100.0 29 .................................... GACAAACTCAAAGATGATGGTGCGCTATG 187882 36 100.0 30 .................................... GCTGCCATCGTGAACTCGATGCCCTCCAAA 187948 36 100.0 29 .................................... GCAAGAGAGCCGAAGAAATCAACAGGCAG 188013 36 100.0 30 .................................... GACAAAGCGCATTTCTATACTCAGAAGAAA 188079 36 100.0 30 .................................... TGAACGATGTCTCTTGCGAGCCGTTCCTGA 188145 36 100.0 30 .................................... ACTATCTTCGATGCTTTCACTTGGCTCTTA 188211 36 100.0 30 .................................... TCATGGACGGTGAGGTAAAGCACGACCATG 188277 36 100.0 29 .................................... TATACAGCCACAGCAAGCGGCACCATCGC 188342 36 100.0 30 .................................... GCAAGCATCACGGTATCATCGCAATACCTG 188408 36 100.0 29 .................................... CCAGCGGTTTTATACTAAATACAGTAAAC 188473 36 100.0 30 .................................... GGTTATCTCAAACTCAACACAGCCAGCACG 188539 36 100.0 29 .................................... AATCTGAATTTCGCGTCGTTCGAGAAACG 188604 36 100.0 30 .................................... GGGATATATCACCAAGATAGAGACATTCAA 188670 36 100.0 29 .................................... AGGCTTCGAGAATGGTCTCTATGCTCGTG 188735 36 100.0 29 .................................... TCCATCGCAATACATAGCATCATAACCGA 188800 36 100.0 29 .................................... GCTTGCTCTTGCGTGTGTCATGCCATGCA 188865 36 100.0 30 .................................... TGATAAAACGCTTTTTGAACAAGGAAAGGT 188931 36 100.0 30 .................................... CACACACCGAAGATGCAAAGTACCTCCGTC 188997 36 100.0 30 .................................... GAGAACGACTGGCAGCGGCTCGCACAGTTC 189063 36 100.0 29 .................................... TAACTACTATGATAGTGGCAACCTCATGC 189128 36 100.0 29 .................................... CGTCCGCAACCATCCCAAAAACTATTCGG 189193 36 100.0 29 .................................... TGGCCTTCGAGGCCTTCTCGGCCTGTGCG 189258 36 100.0 29 .................................... CTTCGATTTCTCGTTGTTCAGATTGTACT 189323 36 100.0 30 .................................... CCAACGTGGTAACCCTGACCTATTAGGATG 189389 36 100.0 30 .................................... CAAGAGCACGAACGTCTGAAATGGTCGACA 189455 36 100.0 30 .................................... TTTTCGTTCAATGCTACTTTGAACAAGTCG 189521 36 100.0 29 .................................... GTGGCAGTGCTAACATTCCTAAAGTATTA 189586 36 100.0 30 .................................... CGTAATAAGGGAAACGAGGAGTGCAAAATG 189652 36 100.0 29 .................................... CTGGAGGCTATCTATAAGAGCGCCGACCC 189717 36 100.0 30 .................................... CGTGATGAATTTACTTACAACGGGGTTTGG 189783 36 100.0 30 .................................... GTTTGCCAAGCTATTAGGCGTCAGTCCTCA 189849 36 100.0 30 .................................... TTTGGACTCTCTTTGCAATTCCCTAATATG 189915 36 100.0 29 .................................... TCGATACTGAATCGACTACGACTCGCAAA 189980 36 100.0 30 .................................... GGGCAGCGTCGACGTTGATGCTGTATGTGA 190046 36 100.0 29 .................................... TTTATGTTTAATTCTTCTATTGATAGATA 190111 36 100.0 30 .................................... TTTAATTTAAAAATAAAGAGCATAAATTGT 190177 36 100.0 29 .................................... CCGCAATGAGGTCACCGGCAAAAAAACGA 190242 36 100.0 29 .................................... GCTTTCCAGATGAAGAGTAACGGCAGTAG 190307 36 100.0 29 .................................... ACTAATTGTTATATGCTTGCAAGTATCAA 190372 36 100.0 30 .................................... AGTGTTCAGCACCATTGCGGTCACATCCTT 190438 36 100.0 29 .................................... CAGAAATTCTTTCATTGCCGTTTGATTTA 190503 36 100.0 30 .................................... GCGGCAGCCTTTCGGGGTTGGGCAGGGCGA 190569 36 100.0 30 .................................... GCAGCGTCTTGTCCACCGCTCCATTGATAT 190635 36 100.0 29 .................................... ATATTTATTGTGACCCGCATGGGGTAATG 190700 36 100.0 30 .................................... TAGAAGGGGCGCAATATCTCCTTATCGCTG 190766 36 100.0 29 .................................... TCGTAATGATACGAATGAACTACACCGAC 190831 36 100.0 30 .................................... CAAGATGCCAAAGGCCCGACAATTCAAGCA 190897 36 100.0 30 .................................... GATGGCATGCCGGGTCATCCACGCATCCAT 190963 36 100.0 29 .................................... TCGCCGATAACGCCTATGCGCTGCTGTTC 191028 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 57 36 100.0 30 GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Left flank : AAATTCTATAAAGGTGAAACAAAAAAGCTTTCCTTGCCAGTTCTTATATGACTTTTAACCGACTTAATGCATATCATATCATGTGGCTGTTCGTATTCTTCGACTTGCCTGTGACTACAAAGAAAGAACGCCACGACGCAGCACTCTTCCGTAAGAACCTGGAGAAAGATGGCTTCTCCATGATGCAATTTTCTGTTTATATCAGGCATTGCGGTTCCTATGAGAGTATGGATGTTCACGTCAAAAGGGTAAAAAGCCTTATACCAAAATATGGGGCCGTAAGTATTCTCTCGGTTACAGACAAGCAATACAGTAATATATATAACTTCCGTGGAGTACCTAAAAATCAGAAACTAAAAAAAGAAATAAAACATATCAGCGAACCGATACAATTAGAACTTTTTTAGTATCTTTGCACTGGAAATAGACCTACACTTCCGTTTTTTTTATCTCTCCAATGGCCTTGAATCTCTTTATTTAAGGGCAATTTAGAGAATAAG # Right flank : CTCTGCACTGCCCAGTCACTCTATGAGCGAGTTGCGGTTTGATTAAAGAAACCTCCATTTGAGACACTATACAATTTGGCCCTTGCTTTGCCGTTTCTGGCTTAGCAAGGGCTTTCTTTCGTAGAAAGCCCGTTTAAACTTCCCCTTGTTTTAGTCTCTGCATAATTATTTTTGCCAATATTATTGGTAATTTCTTGCAGATATGGCCATTTATTTGTACCTTTGTATAGTTCTTTTAATTATATAGATACTATACATATTTATGGCTATTCCAGAAGAGATAAAGTCAGTCGCCCGCCCCAAAAGTACGATAGTCCGACAGAGAGGCAGTCGTTTTGTCGTCATAAAAAGGACGAGCAAAAGAATTAACGGGAAACCTATCCCCGTAGACCAAGGAACGGTAGGAGAAATTGTAAACGGCAAGTTTGTCGAGGGCTCATATATGCGCAAGAAAAATCAAGTGGATATTAAAGATTATGGAGAGGTGGCTCTCTGTGACA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 4 196258-196482 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTZ01000005.1 Prevotella sp. R5064 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 196258 27 96.3 38 ......G.................... TGGAAATCAGATGTATTGAGTATTGTCCAGTTGCGGTT 196323 27 100.0 39 ........................... GTACTTGCCGGTCTCACCCGCGGCCGTTACGTTGCGGTC 196389 27 100.0 39 ........................... AACACCTGGCGCTCATCAATCAAGCTGTGGGTTGCGGTT 196455 27 85.2 0 .................C...G.A..G | G [196476] ========== ====== ====== ====== =========================== ======================================= ================== 4 27 95.4 39 TGATGTAGGAATAGAACGATATACAAC # Left flank : CTTTCCATTCACGCCCACATCCCGCAGCGCCAGTTCATAGGCGACTCGCAGGAACTCATTCAGAAACTCAACACGATTATCAATAACTCTTTAAAAACAATAAAAGATGGAATCATTACTCTTGCCAATCATTAATTACATTTCACAATCATTCCCCGAAATTCCTTACGTCGACGAGGACTACGGACAGCTCGAAGCCATCGACAACGAGAACATGGATAACTATCCCGTCGTATTCCCCTGCGTCCTCATCAATACGGATTCCGTCGACTGGTCGTCCCTTTCTGCAAAATCACAGAAAGGCAATGCGCACATCTGCGTCCGGCTCTGCATCGACTGTTATGCCGACACGCACTTCGGCTCTAACACTACAGATAAAATAAAGGAACGCGCCGACCTTGTCCACTCCCTCCACGCCGCGCTCCAGACCTACCGACCACTCGCCGTCGGCGCGCTCGTCAGAACCAAGTCAAAGTTCTACGCCTGGTTCCAGTTGCGGT # Right flank : GATAGGCGGCACTACTTTTGATAAGATAGGCTGCTCTCGGGAATGAAAAGAAAAACGATGTTTTTCTTTGTCATCCCACTCGTTTGTACTATCTTTGGGTAAGATAGGCTGCACCTCGGAAATAAAAATAAAACGCGTTTTATTTTGTATTTCCCTCGGTTTGCACTATCTTTGCAAAAAAAGAAAGGAATAATGAATGAAACCGATACTCAACGACTATCACAAGAAGATCAACGAGGTGAAACTCCAGTCCGTGGAATCCTGGAGCAAGCTGAAACTGTCGCACAAAGAGTGCTTAAATCAATTCAAGCGGTTGCGGGAACAACGGATTGCAAGAGAGTCCAAATCGCTCGCTTAACAGATTTTGCCAAGAATAACAAATGCTGGATAGATTCACCTGAATCACTTGGCGATTTTGCTGATAGAGGTTCGGAGAACGAAGTTTATCTATCCAAAGACAATGATGTTGTTTATAAACTGAATGACTTCCGTTATTCAGA # Questionable array : NO Score: 2.63 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //