Array 1 1801343-1797951 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP030106.1 Acinetobacter baumannii strain DA33382 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1801342 30 93.3 30 ............................GG AGAAATATTTTTTTTGAAAAATTATAAAAA 1801282 30 93.3 30 ............................AC TCCTGAGCAATTAATACGCAAGAGAATATT 1801222 30 96.7 30 .............................C TTGAGTGTAGCTCATTGCTTACTGCTAAAA 1801162 30 96.7 30 .............................G CTTCATCATCATTTAGAGATAAATATATAA 1801102 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 1801042 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 1800982 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 1800922 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 1800862 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 1800802 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 1800742 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 1800682 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 1800622 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 1800562 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 1800502 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 1800442 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 1800382 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 1800322 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 1800262 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 1800202 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 1800142 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 1800082 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 1800022 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 1799962 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 1799902 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 1799842 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 1799782 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 1799722 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 1799662 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 1799602 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 1799542 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 1799482 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 1799422 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 1799362 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 1799302 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 1799242 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 1799182 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 1799122 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 1799062 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 1799002 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 1798941 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 1798881 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 1798821 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 1798761 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 1798701 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 1798641 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 1798581 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 1798521 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 1798460 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 1798400 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 1798340 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 1798280 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 1798220 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 1798160 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 1798100 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 1798040 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 1797980 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //