Array 1 45113-47510 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSWB01000011.1 Ligilactobacillus salivarius strain 6_2 Scaffold11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45113 36 100.0 30 .................................... TGGCAAACTATCCCACGTTTTAGTCTTGAA 45179 36 100.0 30 .................................... GATGAGCGCACGTTTAACGTACCTGGACAT 45245 36 100.0 30 .................................... GTCATTGCTTTTTGGTCGTTGATATACTCT 45311 36 100.0 30 .................................... TGTTTCTTAAGCAGTCTTGCCATCTCTCGT 45377 36 97.2 30 ..................................G. TGCTCAAGGAGTTATCGTTAAAGCCTCACA 45443 36 97.2 30 .............A...................... CAGTTATGACCGTAAGTTGTTAATCCCCGC 45509 36 100.0 30 .................................... TGCTCAAGGAGTTATCGTTAAAGCCACACA 45575 36 100.0 30 .................................... CAGTTATGACCGTAAGTTGTTAATCCCCGC 45641 36 97.2 30 .................................C.. CAGTTATGACCGTAAGTTGTTAATCCCCGC 45707 36 94.4 30 ..G...........G..................... GCGTGCTAACATGGCTGAACTATCTTCAAC 45773 36 100.0 30 .................................... AAAAACGGTAGTTAAAAATCTGAATCTTGA 45839 36 97.2 30 A................................... GCGTGCTAACATGGCTGAACTATCTTCAAC 45905 36 100.0 30 .................................... ATTATTTCCAGTTACTCTTTCTTTAAACAC 45971 36 100.0 30 .................................... GGCTCAAAAAGTTATCTGGGGTGCGTTCTT 46037 36 100.0 30 .................................... TAGCCGGGCAGTATAAACAAGCATTTTTCC 46103 36 100.0 30 .................................... GTAAGTCTAATAACGAACTAAACGCAACTT 46169 36 100.0 30 .................................... CAATCATAGATTTTATAAAAACATTGTTAA 46235 36 100.0 30 .................................... ATATTTTTACTTGAGTTGCGAAGGGTTGCA 46301 36 97.2 30 .................................C.. TAGACTTTTGATAACCATTCTCGACCATGA 46367 36 88.9 30 .G............G....G...............G AAACACTCCAAGTGTTCAAGCAGCTAGAGG 46433 36 100.0 30 .................................... TAGACTTTTGATAACCATTCTCGACCATGA 46499 36 97.2 30 .................................C.. TAGACTTTTGATAACCATTCTCGATCATGA 46565 36 97.2 30 ..................C................. AAACACTCCAAGTGTTCAAGCAGCTAGAGG 46631 36 100.0 30 .................................... AAACACTCCAAGTGTTCAAGCAGCTAGAGG 46697 36 100.0 30 .................................... AGATGTTTTAACGTTTATCAACTACAACAG 46763 36 100.0 30 .................................... ACGAAAACCTATCGAAGTGCTAAGCAGTTA 46829 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 46895 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 46961 36 97.2 30 .................................G.. AAGTTCACACGAAAAGCCCGATGACAATAC 47027 36 83.3 29 ..........T...G.....T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [47060] 47093 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 47159 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 47225 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [47258] 47291 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 47409 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 47475 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 36 36 96.9 31 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [6-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //