Array 1 78690-78391 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PZIH01000003.1 Staphylococcus haemolyticus strain SNUC 3453 contig003, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     78689	    36	 100.0	    29	....................................	CTATGCTTGTAATTTTAAGTGAATGCTTT  	
     78624	    36	 100.0	    29	....................................	CTACGCTAATAGATATAAAAACGATACTA  	
     78559	    36	  97.2	    31	...............................A....	TCAAACTTGTAATCAAAATGTTCAGGTAATA	
     78492	    36	  97.2	    30	...................A................	GTTTTTTTAGGGGATATAGGGGGGATGACT 	
     78426	    36	  75.0	     0	.....G...........C........C..A.ATTTA	|                              	
==========	======	======	======	====================================	===============================	==================
         5	    36	  93.9	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC	                               	       

# Left flank :   CGATACAAACATAATTGTATTAACAGGATCATTACATTTCCTATCTGAAGAGTGGAAATACAATAACTATATTAGAGATGGGAAACAAAAAAACACATCTGAATTTCTAGAAGAATTAGAGTGGAACGCGCCACTTGATTTTGATAAGAAGGATCTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTATATCCCATAATATCAAACTATCAAATAGCACAAATTATGTTATTTAATGCCATAGATATATATGCTGGGATTTCATATATGCAACATTGTAATCATAAATTTAAATTAAAAATCAAAAGTGAATTGCTGCCTAAAAGCATCAATAAATATTTAAATCAACAATTGCTGAATTAATTACTTTACTATAATTAACTTAATAAATTATTATTATCTTAGTGAATGAGTTTAGCTAACTTGTTCACTAAGATACCTTTTTTTGAACTAATTCTTTTAGCGATTAATATTGCTAGAG
# Right flank :  AATTAATGATTACTAAGTGCTGTTACTTGCTACTTTTATTATCATGATCAATCAATTGATCAAAAGTATAGAAATATTTAAATTTAATAAAAATATTAGTTGACTAAGCATCCAAGATAGCAATATAATTAATTTATAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTGATTTATTAATGGGATTTTTTCTTTTTAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTGTTTAATGTCATTTAATTACACATTATCATCAGTAATTTGACCGATCCAATAACTCGCTGCAAATCCAATGATTAAAGTGATGATTGAAAGTGTCCACTCAATACCAGTTTGAGGAAGACCAGGGAATACAGCATATATGGAGCCAATAACGAATCCAGTTATTAATGCGAATGTGGTATAGAAATGATGATGTAGGAAGTATTTA

# Questionable array : NO	 Score: 5.68
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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