Array 1 153443-153292 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWU01000015.1 Streptomyces alboviridis strain NRRL B-1579 contig15.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 153442 29 100.0 32 ............................. GAGCTCCCGGCCGAGGGCGGGGACGCGCTCGG 153381 29 100.0 32 ............................. AGCTGAGTCGGGGGGTGGGTGCCGTTCTTCCC 153320 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Left flank : ACCAGGAGGCGGCCTCCAACGGCCAGTTCGCGGACCGCCGGTTCCGAACCAGCATCTGGGCACGCGCCGTGGCCGCAAGGCTCGTCTCCGGGCGGGGCGGGGAGATCGGGCGCTTGGGCGGGGGTGGGGTCTTCGGCGGATGGTCCGGGGTGTGATCCGACACGATGGCTCCCAGGATCGGCGCGGACATCCAGCGTAGGGCCGGGTGTTGTGGCCCATGGCTGCGATCGGCCATTCCTTCACCCGTACAGATCGGTGCTGTCCAGCGCCGTGTTCGGCGGGCGGTCGGAACACCGGATGACCGGCTGATCCACACCGGACCGGGGAGACGCGCGCGTCGGCCTACGTGGCGGCTGGTGCTAGCCGATGCGGGCGGCTCACTCGGCATCGGGCGGCCCATCTCAGGAGGACAGTTTTCGCTCTGTCACCATGTAAGGGTGAGAGACGCGCCCGTAGGTCAAGGAATGACAAAGACCCTATAAACGCGCAGGTCAGAAAGA # Right flank : GTGCCGGGGTCCAGGGCGGCCAGGAGCGGGAGGGGCGGGGGTGTTCCGGGAACGCGGCGCTTACCAGCTGCCCCCGGACACACGGCGGCCCCCACCAGCCGGTGGGGGCCGCTTTGCTCCCGCACACCCTCGGCCAGTTCGTACTTGAGCCGGTGATGCCGGTCCGTCTCCACAGCGGGCGACGGCGTCTTCCTCATCAGCTGCCAAGCGGTGTTCGTATTCGCCGGTATCTGCTGCATCAACTGTTTCCAGCCAACAGCCGCGCACCGGTTGGCGAACTTGATGTGGTACTCACACTTGGCCGGCGGGGGAGGCACGTCATCGTTCTTGCCTAAGCTCACTCATCCTCCGACGGGGACATGGGTACGTCTCCGAAGTCGCCCTCCCCGTGATCCTGGGTGAGGGTGGCATGCAGCTCGGGGTCGGCGTAGATCTCCGCCGTGTGCTTCCAAGCCGCGATCACCGTGGTGATCGGGGCCAGGCTACCGAGAGAGGTGCTG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [18.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 112785-112332 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWU01000018.1 Streptomyces alboviridis strain NRRL B-1579 contig18.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 112784 29 100.0 32 ............................. GCCCCTTCCGGCGGGGCGGACAGCAGCCGTGC 112723 29 100.0 32 ............................. CCGCCCTCGAAGGCCGTGCGGTGCAGTTCGCG 112662 29 100.0 31 ............................. ACGTTCACCCCACCGCCGACTAACCGCCCCC 112602 29 100.0 32 ............................. CTGGAGCTCCATATCCTGCCGAGGTGGGAGCA 112541 29 100.0 32 ............................. GTCCTCATGTCGGCAGGTAGAGGGGAGAGGGG 112480 29 96.6 32 .....................G....... TCGGGCTCGCCGACCAGACGCAGGGCACCGCG 112419 28 89.7 32 ...........AA-............... GTTCGCGGCATCGAGGCTCCGGCCGATCTGCC 112359 28 86.2 0 A..........A-............C... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.6 32 GTGGTCCCCGCGCGTGCGGGGTTGGTCCC # Left flank : TCCCGACCCGTCGCGGGGACAGACAGAAGGCTCACAGCAGTCCATGACCGCTCCGTCCGGCGCGCGTGACCGGACCATGACGGTTCCTCACCAACAGGCGTCACATTGGCCGCACAGCAACTGACCCGGGCTCTTAGACTCTTGGGCTCCGCAACTACAGCATCACCGCCTGCCCACCCCCTTCCCCTCCGTGGTGGAGCCGTTCCGGGCGGCGGGGCCCCTATGACCTCTGCCACCGCTTGTGCGGCTGGAGTTGGACCGGCCTCCGGGGCGGGGTGAGGAGTGGGTCGCGGGGCACACTTGAGCGGCGAGCCGGCTGCGGTCAGCGTCGCCCGGGGTGCCGAGGCGCGCCACCGGGGGTAGACAGTGCGTCCGCGATCGGAACAATGGAGCTGCACTGCCTGCGCCACGGGCCACCCATGAGCGAGGCCGATATGTCCGTTTCTCGGGAAGTAAGGAAAAACAGCCTCCTGGCCGCATAAACCCGCAGGTCAGGAACT # Right flank : TGTGGGCGCCTGACCTCGGACACACCCGGGATGCGGTTTCCGCAAGCGCGGGACACCCCGGGTCCGACCGCACACCGCCCGCACCGTCTTCCGTCGCGTCAGCCCGATGCCTCCCCTGCCTTCCGGAGGAACCGGGCCGGTCTCGCTGCGGGGTTGCTGACCCGGCATCCCTCCTCGGGGGCAAGCGCCCCGATCGAGACACGCCGGGTCAGAACTACGCCCCACCCCGTCCTGCGGCGCGGCCCGCACGTACACGGATCCGCACGCCTCGCGTCAGGAGCTCAAGGGAGTGCATGACTTGGCCACAGGCTCCCTCACCCGCACGTCCAGCGCCAGGTTCAGCTCGTCCACGAGGTCGATCGCCGCGTCCACCTCCAGGCGGAGGTACGCCGGACCCTGCGTGCCCCCGTTGAAGGTGATCATCAGCGGCAGGTCGAAGTACGTGTCCTGCCTCTGTACGTCGATGACCCGCATGACGGGACGCGCGGGGATGCGCTCGG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 90329-87861 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWU01000019.1 Streptomyces alboviridis strain NRRL B-1579 contig19.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 90328 29 100.0 32 ............................. TCGGAGGTGGCTGCCTGGTGCTTGATCATGGC 90267 29 100.0 32 ............................. GTCCGGCAGGGCTTCCTGACCATGTCGCCGTC 90206 29 100.0 32 ............................. GCGGTGCAGCTCGGCGTCATCGAGGAGGGCCA 90145 29 100.0 32 ............................. GAGGTGTCCAGGGAGTCGGTCATGTCCTGAGA 90084 29 100.0 32 ............................. GACGTCACCGCGGCCGATGCCGCGGTGAAGGC 90023 29 100.0 32 ............................. GAGACACCGACGTGACGACCACGACGGCCAAG 89962 29 100.0 32 ............................. TCCCAGACCGCCTGACCTGAAGGAGACCCGTG 89901 29 100.0 32 ............................. GCGTGGGTCACCCAGGCCGAGAGGAAGAAGCT 89840 29 100.0 32 ............................. CTTCCAGAGTGGGCCCGGCGTGGTGGTGAGAC 89779 29 100.0 32 ............................. AACGCGTGCGCGGCGGGGCTGCTGGCGTCGAT 89718 29 100.0 32 ............................. CGCTGATCGACCTGCGGGACATCTATGAGAAC 89657 29 100.0 32 ............................. CAGATCGAGTCCGGCGGCGACTACCGCGTCAT 89596 29 100.0 32 ............................. CCCGACGTGTTCGAGGCGGGGACCGTGCCCAC 89535 29 100.0 32 ............................. ATCCCGGGCGTCGACGACATGAAGTCGATGCC 89474 29 100.0 32 ............................. GCTGCGCTCGCAGAATTCCTTTGCTTGGCCGA 89413 29 100.0 32 ............................. GAGGGGTCCGCGGGAATCAGCCGCGTCGCGAA 89352 29 100.0 32 ............................. GACCGGCGGCCGGCGGAATCCCCGCCCGACGC 89291 29 100.0 32 ............................. CTCGGCCTGGTCGTCGCGGGCTACATCGGCCG 89230 29 100.0 32 ............................. TCCCCAGTTCCTCAGGGGGACTTCCTCTGGGG 89169 29 100.0 32 ............................. GACCGGCGGCCGGCGGAATCCCCGCCCGACGC 89108 29 100.0 32 ............................. CCCTGGGCGACGAGGTGGCCGAACTGGTGGTG 89047 29 100.0 32 ............................. CACGCCGACTGGCTCGTCGACTCCGAACACAC 88986 29 100.0 32 ............................. CAAGTCATCCGCGCATCCGAGGCAATCCAGCA 88925 29 100.0 32 ............................. TTCGCGCCCGATGTCCATCAGACTCCTCCGTA 88864 29 100.0 32 ............................. ATGTCGACCGGCTCGACGGCCGCCCAGTTGAC 88803 29 96.6 32 ............................T CGGCTGCGAGCTGGACGGGCCCGCCCTGAAGC 88742 29 100.0 32 ............................. TAGGTGCCGCTGATGCCGCACCGGATACGCGT 88681 29 100.0 32 ............................. TTGACCTTCCGCAGGTTGCCCATGCCGGCGGA 88620 29 100.0 32 ............................. TGCGTGCACACCCCTGTTGTACCGCGGCCTAC 88559 29 100.0 32 ............................. ATGACCGGCGGTCTGTCTATCGACTCACCTAC 88498 29 100.0 32 ............................. CCGTGAAACTCTCCCGCACCGTCGCCGCCAAC 88437 29 100.0 32 ............................. ACGTCCAGGGCCTCCCGGATGGGCTGGACCAG 88376 29 100.0 32 ............................. GACTGCATTCCGCTGTGCGTCTCCCGCCACCG 88315 29 100.0 32 ............................. TAACGCACCGTCCTCCCCGCGCCCGCCCTCTC 88254 28 96.6 32 .................-........... ACGACCCGCTCGTCGCCAAGTGCCGGGAAGGC 88194 29 100.0 32 ............................. GTCCCCGAGCTGACCGAGTCGATGCTCGACCC 88133 29 100.0 32 ............................. GTGCCGCTCCTCGTCCTCGACGACCTCGGCTC 88072 29 100.0 32 ............................. GCAGCGTCCGGTGAGCAGAAGAAGGTCGCGGA 88011 29 100.0 32 ............................. CGGCGATGAACCGCTTCGGGCGGACGACGACG 87950 29 100.0 32 ............................. GGCACCTACGACCAAGGAGGCTACCTACAGCC 87889 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.8 32 GTCCTCCCCGCCGACGCGGGGGTGATCCG # Left flank : TCCCGCGCATCGTCCGGGACGTTCAGAGCCTCCTGACGCCACGCTCCACGGATGCCACCGACGAAGACGAGCCACAGGAGAAGCGCGATGTCCAACTGGTCCACCTCTGGGACCCCAAGGTCGGCGCCCTGCCCGCGGGCGTCAACTACGCGGCCCGAGGTGAATGATGCCGTCCATGCTTGTGATAGCCACCACGGCCGTTCCTGATCACCTCCGCGGAGCACTCAGTCGTTGGACCAGTGAGGTCGTCCCCGGCATCTTCGTCGGGAGCGTCTCCGCCCGCGTCCGCGACCAACTCTGGCAAGCCGTCACCGAAACCGTGGGCAACGGAGCCGCCGTCCTCGTCCACCCCGCCCCCACGGAACAGGGCTACGCCATCCGAACCGCAGGCACCCGTCGCCGCGTACCCGCCGACTTCGACGGGCTTACCCTGATCAGTATGACCGCGGCACCAAAGGCAAAGGAAATGCAAAGCCCTTCTTAAGGTGCAGGTCAGAAAG # Right flank : CAGCTGGTCCTGTGGGGGCCGCCACCCCCGGCCGTACCCAGTCGAAACGGCCCTCTGACCTGCAGTTTTGCCCTGTAGGTTCCGGTTCCTGGCTTCCGGTTGCCTCGGTCTGTTCCCAGGTGTTTCTGTCTGTTCCTGGGCGCTGTTGGTCACGCGTTGGTCATGCACCCCTCCTGAGGCAGCTTCTACCGGTGACTGGCCGGATACATCGATCAAGGCGCGGTCGGCCCCACTCAACGGCCTGACACAGCACGCAGCCCTGGAGAGGATTCTCCGGGGCTGCGGCATGTTCGCAAAAGGTCGAGGCGGTCGGTGCCGTGGGCGCGAGGAAGGGAGGTCTACCTTCGGGCGGGTAGAGCGTGCCGAAGGCGGGCCGAATTTGGGGGGGAGTGGTGCCCGCCGGGCGCCATGACCCCAAATCAGCTGCTCAGCCGGGGCAGTCAGTTCTTGCCCTCGCGGTGGCGTACGGCGTGGGTGGCTGTCCAGGGTGCGATGAGTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 100217-102866 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWU01000019.1 Streptomyces alboviridis strain NRRL B-1579 contig19.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 100217 33 93.9 28 .............................A..G CCCGCGACGACCACGGTTGGGGCAAGGC 100278 33 93.9 28 ..............................A.A TCGAGGAGTGCGCCCCGTGCCGCAAGGA 100339 33 97.0 28 ...............................T. CGGTGCACGTCTCGTTGGGGCTGAGGAG 100400 33 87.9 28 .............................GGGC GCCCACCAGCCCCGCCTGGGTCCGGATC 100461 33 93.9 28 ..............................GT. GACGATGCCGGGTCCGGCCCGCAGAGCC 100522 33 93.9 28 ..............................T.A ACCAGGCGTTGACGTCGCTGCGTGCGGC 100583 33 100.0 28 ................................. TGGCCAGCTTGCCCATGACCCGGTCCAT 100644 33 93.9 28 .............................TT.. GGGTGGCCACACCGCTGTCGTGTGGGTC 100705 33 93.9 28 ...............................GA GCCGCTGACCGTCCCCACCGAGTGGACC 100766 33 93.9 28 ..............................T.G GCAAAATGGTGTACTTCTGCGCCGATAT 100827 33 93.9 28 .............................G..C GGCGTACGGGCGCGGTGTGGCTGCCGTT 100888 33 97.0 28 ...............................T. CCGGTCCGCCCGCGGCTCTCAGGTGGTG 100949 33 87.9 28 .............................TGGA CCGGGTTCTCCTTCTTCTCGTAGGAGAC 101010 33 90.9 28 ..............................AGC AGGCAGAGGAGAGCGACGGGTGCACCTG 101071 33 93.9 28 ..............................T.A TCGTGACCGGTGGTGCGGAGCTGCTCGC 101132 33 97.0 28 ................................G CGACGCCCGCACTGGTGCCGAGGCAGAT 101193 33 93.9 28 ..............................G.G CCACCGCCGCCTGATCCACCACATGAAG 101254 33 93.9 28 .............................A..C TGGGCGGAGGATCCGAAGGTTGAGCCGT 101315 33 93.9 28 .............................A..A CCCGGTCTCTCGATGACGACACGGTCGA 101376 33 90.9 28 ..............................TGG TCCTGTGCGTCGGCCTCATCTACATGGC 101437 33 90.9 27 .............................AGG. CGCCGAGTTCCTCGGCCGGAAGGCCCC 101497 33 93.9 28 ..............................TG. TCTGGGCCAACCCGCGACTCCGCCGGTA 101558 33 90.9 28 .............................GG.G CACGGGGGATCATGTGGCAGGCGTATTG 101619 33 87.9 28 .............................AGGA CGAGTGGCAGTATCCGCCGTTCATTTTG 101680 33 87.9 28 ..........................G..GA.A TCGGCCCCCCGATCCAGGCGACCATGGC 101741 33 87.9 28 .............................GGGC CCGTCCCCACACAGGTTCTGCGGCTCAC 101802 33 87.9 28 .............................AAGG TCACCGCCGCGTCGGTCGCCGCGTACCT 101863 33 90.9 28 .............................TG.C GAGCAGCCAGACGCAGGGGCGCCGGACC 101924 32 87.9 28 .................-...........T.GG TCGCGGTGCTCACGCGGCCTGGTCCTCT 101984 33 100.0 28 ................................. GTGCGGCGGACGCCCGGTAGCCGACCAT 102045 33 93.9 28 .............................T..G TCGGCGGCGCCTGGTACGGGCAAGCCAC 102106 33 90.9 28 ..............................TGG CAGCATCCGCCCAGCTCACGATCGGCGC 102167 33 93.9 28 .............................G..C ACGCCTCGGGGACACCAGTCCGTCTCAC 102228 33 87.9 28 .............................AAGG CGGCCGGTGTCGACCTCCCGCGCACGTC 102289 33 87.9 28 ..........T..................GAA. TCCAGATCCGCACGACGGACGGGAGCGA 102350 33 90.9 28 .............................TT.C CGACGTGGTGCAGGAGCAGGAGGATGTC 102411 33 90.9 28 .............................TA.A TCAAGGAAATGTCGGCCGCCCTGCGTGG 102472 33 84.8 28 ..........................A..GAGA TCGCGGACCGCCTGGCCCCGTACCTGCC 102533 33 90.9 28 .............................G.GG CGCGGCCGAGTCCGCGGCTGGCGTCACG 102594 33 90.9 28 .............................AT.C TCGGGGCCGTCGCCCTCGTACTCACCAT 102655 32 87.9 28 .................-...........TG.C CCCACGTGATGCCGGTACGGCTCTGGCC 102715 33 81.8 24 ......................CC.A...GGG. CCGGCCATGCCGTCGTCCTCCTCC C [102737] 102773 33 84.8 28 ............A.....A.....C.....T.A CCAGGGAAGGCGCTCGGCGCGGGTGGTG 102834 33 75.8 0 AC......T..G.......A..........TGC | ========== ====== ====== ====== ================================= ============================ ================== 44 33 91.2 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCCT # Left flank : GGCCAGCGCACAGGCCGACGAGCGCCCGAGCGCGATCCGGTTCCCCGACCAAGCCCATCCCGTCGGCTATACGCGCCCTCTGGTTGCCCGCCAGATAAACGTCCCACAAGTGGAGCGCCATCGCGGCCGCGTCGAGAAGATGCCTCACCAGCGGGTAGGGAGGCAACGCCGGATCCAGCCCCCGGGCCTTTCCCCACACCGACTCATCCACCACGCTCCGCCTATGCAGCACGCCAGCCCTCTCCGCTCCACCACTCGAACCTGATCTGGCAACGGAAGCGAACCCGCCACCCATTGCATACAAGCACCCGGCACTGACATTGATGTCGCTACTCGCGTACCGACGGCGTTCCTCGCTCAGTAACGTGGCTCGGCGCTCGCTGGGCGGCCTTGCAAGCTGCAGCTGGATAGAGTGACGGCATGCGTCTGACCGAGCGCCTCACCCCCTCAAGAATGGCAAAGAAAATGCAAAGCCCTTCTTAAGGCGCAGGTCAGGAAGT # Right flank : CGCGGGAGGCAGTCGTCCCAGCCCTTGCCGTCGTTCCCGCCGACACGGCGCCAAGCCGGTCCCGGAGCGACCCGCCAGCTCGCCGCCGCCACGGGCCGACCGTCAGGGGTGCACTCCGTGCCGACCAAGATCCGGGCCATACGCGGACCAGCCGCCTACGGCTTGGCCGCGTAGTGGCCATTTCCGCTGGTGAGGGGACCATGGGAGGCGTGTACCACCAGCAGACGAAGAACCTAGTGGCACTCTGCGCAGGTGGCTGAGTGGGACCGCTCAGCACCACGAAATCCCCGGCGCCTTGCAACACCCGCGCAGTCAGCGCACCGCCTGATCAGCGGGGCAACGCGCCTGACGGCCCATCAGAACGAGCGTCAAATGAGCGTCACGATGCCTCTGAGAGCGTCATTTCAGCGTCAAGATATCGCCCGTAACGCCCACAGTGCACATAACGAACACCACTCGAACCTGCAGGTCTGGCTGCCTTTGTGACCGGTTCGAGGATC # Questionable array : NO Score: 4.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.07, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //