Array 1 57500-55291 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDXV010000010.1 Devosia faecipullorum strain CC-YST696 contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 57499 36 91.7 30 TA.........................C........ AAGTGGTCTGGCTGCTGGCGGGGCAGAGGT 57433 36 100.0 30 .................................... CGGCTGTTGATGTTGGCCTCGTACTCGTCA 57367 36 100.0 30 .................................... AGATCTCTACGCCGATGTGCGGCGGGCGCT 57301 36 100.0 30 .................................... AGCAGTCTGTTTCAACACCGCCCGGTGGAT 57235 36 100.0 30 .................................... GGGCGCGGCGAGCGAACCAGCCGACGATGA 57169 36 100.0 30 .................................... ACATATCCGTCTGCATCAGCAGATCGGCCA 57103 36 100.0 30 .................................... CGCTTGACACAAACGACTACCGAGAATTTG 57037 36 100.0 30 .................................... TGTAGCCGTACTTGTGGGCCTCACTGAGAT 56971 36 100.0 30 .................................... TGGTGTAACGTTCGACCGTAGCATTCAAAT 56905 36 100.0 30 .................................... AGGGCGGTCCGGCTGGCCGTCGCCTCGACT 56839 36 100.0 29 .................................... TCACGCCCGGCATATCTGCCTTGACGATG 56774 36 100.0 30 .................................... ACTTCCTGCGCTTTCCCATGGGCTAAGGTA 56708 36 100.0 30 .................................... GCATCATTATTTGGAGCGGCCCTGGAACTG 56642 36 100.0 30 .................................... CCTCGGTACTCCCGATGGGGTGGTATAGGA 56576 36 100.0 30 .................................... TGGCAAGTCTCGCATTCGATGATGATCTGC 56510 36 100.0 29 .................................... GCTCGCACCTTGTCGCCCTTGCGCGGCAT 56445 36 100.0 30 .................................... CCCTTCGCCTTATTGTGCCGGGTAACGCCG 56379 36 100.0 30 .................................... CAGCAGGATCGGCTGTTTCAGGGCCTGATC 56313 36 100.0 30 .................................... ATTTCGGCCCACGCCGCTATGTAATGGTCG 56247 36 100.0 30 .................................... AAGAAGCGCCTGAGCAATAGCAGAGCCTCC 56181 36 100.0 30 .................................... CACCTGCTGCGTAGGGTAGAACAGCCAGCC 56115 36 100.0 30 .................................... CGGGGCCGTTAGTGGTCACACGCCCCGACC 56049 36 100.0 29 .................................... ATCACTGCGCAGAACCTCATTGGCGAACA 55984 36 100.0 30 .................................... ATCACTGCGCAGAACCTCATTGGCGAACAT 55918 36 100.0 30 .................................... CCGTTTTTCATGGCGACCAATACCCGTCTC 55852 36 100.0 30 .................................... GCGCAGCAATCACAAGCCGAGAACCAGAAC 55786 36 100.0 30 .................................... ACGGGATAGCCGTGACGGCGCAAGAGTTTC 55720 36 100.0 30 .................................... GTGAGGGTCCGAGCACCGCTTGAAAGCCGC 55654 36 100.0 29 .................................... CATATAGCGGTTGCCATGGTCATAGGCTC 55589 36 100.0 30 .................................... TCGCTACCCTGGCAGAAGATCACCGACGCC 55523 36 100.0 30 .................................... CCCGCGCCTAACGGCCCCCTGGCTGGCGGC 55457 36 100.0 30 .................................... TGGTCTCCCTCTTCGCCAAGCAAGGACTGG 55391 36 100.0 29 .................................... CGGCCTCCCGGTGCTCGCGCATCCCCTGC 55326 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 34 36 99.8 30 GTTGCCGCTGGACCGCTTTTTCTGAACTGCTAGGCT # Left flank : GATCCAAGACCTGATCCAGAGCGGGATCGATGAAGGAGCCGAGTTGGTGGCGGGCGGCACAGGACGGCCGGACGGACTGACGGATGGTTATTTCGTCAAGCCAACCATCTTCGGCGGCGTGACGTCCAACATGCGGGTTGCCCGTGAAGAAATCTTCGGACCGGTATTGGTTATCCTGCCCTATGATACCACCGATGACGCCGTCCACATCGCCAATGATACCCCCTATGGCCTGGCCAGCTACGTGCAGACCCGTGACCTCGAAGAAGGTCGGCGGTTTGCCAGGCGCATGCGAACCGGCAACGTGTTCATGAACTATCCGGACTGGGACACCGGATTGCCTTTCGGTGGCTACAAACAGTCGGGCAATGGCCGCGAATATGCGGAATACGGCCTGGAGGACTTTCTGGAAACCAAGGGCGTCGCCGGCTGGGGCAATTCGGAGATTTGAGCGTTGCAATGGGTGCGGGTGTTTCCTCCGGTGGAAATGCCCGCGTTCT # Right flank : CGATACCGTCCGAACTTCCTAATAATAAAGGGAAATTCGGCGGTGTCGGTGTCTGGAAATGCATGGGGCTGAGTTAAAACAGGGCCAGTTGAGTCGGATTTTTCGTTGGAGAGCGGCGACCTTGGTCGGAGAAACGAACAATGTTTTCGTACTGGCGATCAGTGAATTGAAATACGTATACCTCACCAAATTCGGGTAATTGCGACCCGATCTTTCGGACATAGGATTCAAACTGTTCTTTGCCGTTACAGAAGCGAAGATAGTTGGAAAACTGGCTCATTTCAAACCCAAGATCAAGCAGGGCCATGCGAAACTTGGTGGCGGCATGGCGCTGCGGCTTGGTTTCTACCGGAAGATCGAAAGTAACAAGCATCCACATGAGCTGATATCCGCTGAGGTGAGTATTGCCTGAAGTAGCTTTGAGGTCACGCATTTGGGGAGTTCGTTAGCAGACTGTTAGCATCGAGGACCGCGTTCGCGGGAGTTGGCGGCGGGTTTGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCGCTGGACCGCTTTTTCTGAACTGCTAGGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCGGCTGGACCGCGTTTTCTGATCTGCTAAGCT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.70,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.42,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //