Array 1 44169-44729 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PZHT01000013.1 Staphylococcus hyicus strain SNUC 4992 contig013, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     44169	    36	 100.0	    29	....................................	CAGTTCTTTTTTTAGTAATTGTTCGACTA 	
     44234	    36	 100.0	    30	....................................	TTGTGAGTATTTTGGAGAGAATATGCTTGT	
     44300	    36	 100.0	    29	....................................	ACACCGACGAATGATAGACGGGTTGATGT 	
     44365	    36	 100.0	    30	....................................	GATGGTAATAGATCAAGACAAGGTAATGTT	
     44431	    36	 100.0	    30	....................................	AGAAACTAATGCAACAATGCAAGCCAGATT	
     44497	    36	 100.0	    30	....................................	GTTAGAAATTTAATTAAAAGCCTTGACAAA	
     44563	    36	 100.0	    30	....................................	AGATTGCATGAAGCAATTTTATCAAATGGC	
     44629	    36	 100.0	    29	....................................	TTTTCCAGTTCTTAAATGTTTCTAATGTG 	
     44694	    36	  91.7	     0	.......................T....G......A	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  99.1	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC	                              	       

# Left flank :   GGCGTTCACGATGTACAATAACGCCATCTTCATTTTCTTTTTCATTATTTTCAGTGTGAGCTGCAGCTATAGTTAAAATGTTGTTATCAAAATCAACGTGAATGTCTGATTTTGCCATACCTGGAAGTTCAGCGCTGACAACATATGCATCTTCACGTTCAGAAATATCTGTTTTAAAAGCTTGAGATAGCATTAAACCTTGCCCAAAATCTTTGAAAAGATCACTCGGGTTCATATCAAAAATAGAATGATTAAATGGTTTTAATTGGAATGCCATAAAGCATCGCTCCTTCATATTTTAGAATGTCGCAAATATCAAGAAACTGAAATGTTAAAGGTCACATCTGATCCTTTACAATCTTATTATATGGCAAAGGTCAAAGATAGTCAAGGTTAAAGTGATATGATTGATGTAAATTGAAATTTATCCAAAATACATAAAGATCAGTGATATCAATGGATTAGACAATCTTAAAAGTTATAGTATACTGTAGCTAGAG
# Right flank :  AAAGAATAGAATTGGCGTTGTGCGCAGATAGCTTAGTACTTTGTGATTTTAGGTATTTTTATAAGTGTGCTATACATGAAATATATATGCGATCCACTTATTTTAGGGGTAACCCCATAAAATTGTTTAACTCAAAGAAACTAACGTTGTTTAGATAGAAGTTATAACACTCACTCCACAAAAATATCAGAAAATTCTTGACTCAAATGGATCTTATGATAAAATAAATTTACAAGTACTTATTTGTGCTTATACCTAAAATTACAGAATCTACTAAAACAAGACTATATGTCGTGTTTATCCCACTAATTTATTAGTGGGAATTTTTTTGTTCTTCTTTTATAATAGAATTTAAAAGGGAGGGCAATGTATAAATGAATAATTATATACTAGGACTCGATATAGGTATTACCTCAGTTGGATACGGTATTGTAGATAGCGATACGCGTGAAATTAAAGATGCTGGGGTACGTTTATTTCCAGAAGCGAATGTAGACAAT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.60,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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