Array 1 3183278-3187996 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLYT01000001.1 Deefgea sp. CFH1-16 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3183278 28 100.0 32 ............................ TTGCAACGCTTGCCACCGAGCGCCTCAAGATC 3183338 28 100.0 32 ............................ CATCGCCCAAAACGAAACGACAGAAGCAAAAC 3183398 28 100.0 32 ............................ TCAAAATTGGAAAAGAGTTAGTCAGTAAACGA 3183458 28 100.0 32 ............................ ACATTGAAATTGTCGCTGTGAAATTGCGCGAA 3183518 28 100.0 32 ............................ AGCGGCCATCTTCTTTATAGCCAAAGCGGATT 3183578 28 100.0 32 ............................ CTGCCGATTCTATTGCTTATGCAGTAGATCGT 3183638 28 100.0 32 ............................ AGCGGCTGAGGTCGAAGCATTAAAGGCTGATT 3183698 28 100.0 32 ............................ TAATTCCGATATGTTTCATAAATTAGCGCCAT 3183758 28 100.0 32 ............................ AGTGAGGTTGTGCAGCACATTAAGCGATACAC 3183818 28 100.0 32 ............................ TTGGGTGAAGCCCCGAAGGGCTTGTGGATTTA 3183878 28 100.0 32 ............................ GTAATCGACCGCCATATTGAGCAATACAATGG 3183938 28 100.0 32 ............................ GTTGACCGAGGCGGCTTTGAATCGGCTTAGAC 3183998 28 100.0 32 ............................ AAGATAACTTGCTCTGCTTCGGCATCAGTCAA 3184058 28 100.0 32 ............................ AGAATACGTTGCTGGCCATGGCACTCACTAAG 3184118 28 100.0 32 ............................ TCAGTCTGGGCATAGCCTGTCTTTTGAAACCT 3184178 28 100.0 32 ............................ AAAGGCAAAGCTAGTTTCAAATTGGCGCTTGT 3184238 28 100.0 32 ............................ GTCACAAAAAAATGCCTGTTATACCCGAGTAA 3184298 28 100.0 32 ............................ GCAGGCGACTCGGTTAGTTTATCTATACTGCC 3184358 28 100.0 32 ............................ AACACCTCACGCACCACCGTCGCGCGCGTGAT 3184418 28 100.0 32 ............................ ATAGGAAAATCAGGAACGCGGCAATAATTAAC 3184478 28 100.0 32 ............................ AAGCGGTGAAAACTTGGGTGATTGGGATAACC 3184538 28 100.0 34 ............................ AATTCGTCCAGTATAAGAACGCCATTTTTTATCT 3184600 28 100.0 32 ............................ GACAGCGCTAGAAACCACGCTACATGGGCTGA 3184660 28 100.0 32 ............................ GTTGCCGCTTTTGTTATTGCAACAGGTGTATT 3184720 28 100.0 34 ............................ AAATCTGGAATGTCTGGGCCAGTAAAGCCATTGC 3184782 28 100.0 32 ............................ AGTTCGCTACGATGACATTCCAATCTCACAAA 3184842 28 100.0 32 ............................ ATTAAATCACTGTAATGTTCTGCAATAAAAGC 3184902 28 100.0 32 ............................ TAGAGATTAAAGTTTGCGGATAAGCTGAATTG 3184962 28 100.0 33 ............................ CAAAAACAAAGCCACTTTTAAGTTGGCACTTGT 3185023 28 100.0 33 ............................ GCCAAGTGCCTTGATTTTTTTTGGCGACATTGC 3185084 28 100.0 32 ............................ CGCACGTTTAACAGGCGTAAAATAACCATCAC 3185144 28 100.0 32 ............................ CGACACCTCACCATACTTCGCCTGGGCATATC 3185204 28 100.0 32 ............................ GCATCCGAAATTCAAGCGGTTGACCCCGCAAT 3185264 28 100.0 33 ............................ ACAGGATAGCAAGCAAGACGCAGATCCAGAAAA 3185325 28 100.0 33 ............................ GATACGTTGACGTCGCGCCCCAAATTTTTATTA 3185386 28 100.0 32 ............................ ATCAGGCGCACTAAGGCTGGTTGGGCCGCGAC 3185446 28 100.0 32 ............................ TGATGCTTGCGCCGCCGCCTTGAACTTGGCGA 3185506 28 100.0 32 ............................ TCGACGTTTGCCGTGCTAGCCCAATGCACGAA 3185566 28 100.0 32 ............................ AATTGGAAGCCGCCAGCCATCCCGCCCAAAGC 3185626 28 100.0 32 ............................ AAGGTAAAACAGCATGAGCGCGATTGCCTACC 3185686 28 100.0 32 ............................ AAGGACTACACGAAAGAGCAGAACGACCAAAA 3185746 28 100.0 32 ............................ AGCGATAACTAACACCGACATTGCCTTTTCAC 3185806 28 100.0 32 ............................ TGGTTGCGCCCCCACAAATCCAAATAGCCATC 3185866 28 100.0 32 ............................ AGTGCCGCCGTGTCGCACGCGCCCCGACTGCC 3185926 28 100.0 32 ............................ GCTCGCAATTCCGCTTACCTTGGGCGCTTTAT 3185986 28 100.0 32 ............................ GCAAACTGCACCCACTTATGATGATCTAGCTC 3186046 28 100.0 33 ............................ CAAAGAAGAAAATGGCGAGCTAGTCCAAGTAAA 3186107 28 100.0 32 ............................ ATAAACACCGCCGTTTGTTGTTTAATTCACAA 3186167 28 100.0 32 ............................ ATTACAGCCTCAATCAAAATAACCAAGCCTCA 3186227 28 100.0 32 ............................ AAGTCAGATGCCATAGGAAAGTCAGGGACACG 3186287 28 100.0 32 ............................ TATCCGACAAAGTAAGTCAGTCATTCGCTGAT 3186347 28 100.0 32 ............................ ACGTCCGATCTTGCGTCACCACAACGCCGCTA 3186407 28 100.0 32 ............................ TGAAAATCGGTTAATGCATCAACCACATTTGT 3186467 28 100.0 32 ............................ TGTGGTTTATGCGTAACAGCTCGGGCGTTAAT 3186527 28 100.0 32 ............................ CACCACGCCCAACACTAAAACCATCGGATTAA 3186587 28 96.4 32 ...T........................ GTAACAGCAAAACTTCGCGCGACGCCAGAGCT 3186647 28 100.0 32 ............................ GAGTAGCGCTCCCACACGCTTCTCTTCACCGA 3186707 28 100.0 32 ............................ ATCGTCAGCGCCGCCGCAGTATTGATTAAGCT 3186767 28 100.0 32 ............................ ATGCTGCTGCGTATTGCCTTGCAGGCCAGCCG 3186827 28 100.0 32 ............................ TTATCCCACAACATGCGGATGAACTCACTATC 3186887 28 100.0 32 ............................ AGCGTGAATGCCAAATCAACATCAGACTCATG 3186947 28 100.0 32 ............................ AAAACGGCGCGAGCATCGTCGTCTTTGAAGGC 3187007 28 100.0 32 ............................ GCGTCGATGGCCCGCAGCGCCAAAGAAAAGCA 3187067 28 100.0 32 ............................ CACCCAGACGAATGACCACCACGGCCAGCCAT 3187127 28 100.0 32 ............................ AAAGACATCGTCGCGCAAATCAAAAACGACAG 3187187 28 100.0 32 ............................ AGCCTAAAAACAATCGCGCCAATGATGCAAAT 3187247 28 100.0 32 ............................ AGAAAATACGGGTGATATTGGTGTGGATTCAT 3187307 28 100.0 32 ............................ GACAGGTCAGCAAGGGTAAAGCTTTGCCCTTT 3187367 28 100.0 32 ............................ GTAGCCCATGTATTTAAAATCACCGAGAGATT 3187427 28 100.0 32 ............................ ATGAGCAATGTGGGTAATTTGCCGGTGGTTTA 3187487 28 100.0 33 ............................ ACTCACCACGCCAGCGCCAACCGTCGCAGTGAT 3187548 28 100.0 32 ............................ AAAGGCCGTACACGCGGCTTTCGGATTTACGC 3187608 28 100.0 33 ............................ GGACCAAAAAAAAGCCAGTCAGATTTACTTGAA 3187669 28 100.0 32 ............................ GCCAGCGGTACGCATTGCAGCAGCTACGGCAA 3187729 28 100.0 32 ............................ GCTTGCGGGGAGGGTTCCCGATTTGACTTACG 3187789 28 100.0 32 ............................ AACAAGCGTAACCGCCGCCGCAGCAAGGCCGG 3187849 28 100.0 32 ............................ AAGTTCAAAGCGGCTGCGGCTGCATCAGGTAC 3187909 28 100.0 32 ............................ ATTAATTGAGACTGTACCGCCGGATCTATCGT 3187969 28 92.9 0 .....................C.....G | ========== ====== ====== ====== ============================ ================================== ================== 79 28 99.9 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GCGGCACTAACTCAACTGATGGCCGAATCATGGCTAAAAGGTTTGCGCGATTACACCGAAGTCAGTGCGATTTTACTCGTGCCGACTACCGATCAGTATCGCGTGGTGCAGCGGGTGCAAGTCAAAAGCAACCCTGAGCGCCTATATCGACGCTCGGTACGCAACGGGAAATTGACTGAGCCGCAGGCGCAAGAACGGCTTGATCAGGCTAGGGCGGTGCAATCGCAATTGCCGTTCATTCAAATGAAAAGCAATTCAAATGCACAAGCGTTTCGCCTATTCATTCAGCAAGGCGCAGTGCAATCTGCCCCAATTATCGGTACGTTTAGCAATTACGGCCTAAGTCCCACCACCACCATACCCGTTTTTTGACCCTTTTTTTAACCGTCATCGCCAAGCCTTGATTTTAAAGGCTTGGCGATGACGGTTAATTATTAGGATTTTTGACGAAAAGTACGAAAGTTCTTTAACAATGAAAGAGTTGTGATTAAATACGCCCT # Right flank : GTGCGGTAGTCATTGTGGCTTGATTGCGCTAGGCTCCAGAGCGTGTCAGGTGTCGACATAAAATGCCGCTTACCCGTGAGGTAGAGCGGCATTTTTACTGGGTATATTACATGGATCTATTTAGATACTAGCTTGCGTAATAATCCCCATTACTGCCAAACCACCAACGCATGATTTTTCTTGCCACGACGAAGTAGGGTGTAGCGGCCAAATTTGTAATCGGCTTCGGTAATTGTCGCGGTTAGATCAGTGATTTTGGCTCCATTCACAATCGCGGCGCCGCTTTCAATAAAGCCACGTGCTTGGCTTTTTGAGGTGGCAAGCTCAGTAGCGGCCAAGACATCAATCAAGCCGTTGGCGTCGCGCGCCAGCTCGAATGTTGGCAAGCCGTCCAGTGCCAGTTGTTCAAAATCAAGTTCGGTGAGGGCGTTTTGGTCTTCAGCAAACAGGCTTTGGCTAATGCGCTCAGCAGCGATCACCGCGTCTTTGCCGTGTACGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //