Array 1 54105-54434 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDCC01000018.1 Enterobacter hormaechei subsp. oharae strain GN02032 contig18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 54105 28 100.0 33 ............................ CTCACAAACTATTGAGATGATTAACTGATGGAA 54166 28 100.0 33 ............................ TCTTTTATTTTCGAGCATAGTCACGGCACAAAC 54227 28 100.0 32 ............................ GGAACCGCAAACAGAGAAGCGCCACCGCCGAC 54287 28 100.0 32 ............................ AGTGGTCGATGATTCGTGCACGCCACTGCTCT 54347 28 100.0 32 ............................ CTGAGCTTTGAAGGCGAAGTGCGCAAGAAGGA 54407 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 33 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGGAACCCGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACCTCTTCATGGCGGGTGGGCATCCACTCAATGGTCTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAGTCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTACTCTTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGCGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGATGCATAAGTTGTTGATTTTATATGGTTGGGCTGAAGGGGAATAAAAAAGGGTCTGGAGGAAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGGTGTAGATTGTTTCA # Right flank : TCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 15119-15926 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDCC01000030.1 Enterobacter hormaechei subsp. oharae strain GN02032 contig30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 15119 28 100.0 32 ............................ TTCTGGCGTGTCCGGCGTAGGCCGTCCGGTCA 15179 28 100.0 32 ............................ ATAAAATGGTTATTGTAAACGCAAAAGTGTCA 15239 28 100.0 32 ............................ CGGCTGCAATTAAGGCTAACAGTTATCTTCAG 15299 28 100.0 32 ............................ AGGCTCATCAACTTTATTCGTTGCCTGGGTCA 15359 28 100.0 32 ............................ GGCTCGTCGCTGACTTCTTTGTCCCATACAGG 15419 28 100.0 32 ............................ GCTTGGCCTGACACATACTGTATTTAATCCTC 15479 28 100.0 32 ............................ CTGTGGTGTGCCTGGACGCTAATGGTCGCCTG 15539 28 100.0 32 ............................ AAGCACGATCTCAATAATGTTCTCTCAGTGAT 15599 28 100.0 32 ............................ TGGGCGTAAGCAACTGCTGAAATGAAATCGTT 15659 28 100.0 32 ............................ GTTGCGCACTGAGAGACTGGCTCCGTCCATGC 15719 28 100.0 32 ............................ GCGAACGCCTGCCTGATTGACAGGCCACCCTC 15779 28 100.0 32 ............................ AATGGCCTTATAGCGAGGACCATCAGCAGCCA 15839 28 100.0 32 ............................ TGGAAATTGACAGCCGGGAAATTGAGATCACA 15899 28 78.6 0 ...................T.A..CTCC | ========== ====== ====== ====== ============================ ================================ ================== 14 28 98.5 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGCCTCGGTGCTTATCTGGAAGAAGTCAAAACCGAACTCGCAGAATCAATGAGCGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCAAAGGAAAAAGAGTGGCTTCTGGAAAGTACTGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGACAGATGTGGCTGCACCTGAATATGGAAAGCCTGTAATCCATATCATTAATTAAGTTTAGTGTCGCGCGTCGGGGAAGGGACTCCGGCGCGGTATGTCGCAACCATTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTATGAGAATAAAGGCCGCAGAAAAAATGGTTTTAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCTAAATATTCACTCCAGCTATTTTAAAACCCACAATCATCACCACAATCCTCGTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTCCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGACATTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCTGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCTCGTCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCGTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTTACGCAAATGGCCATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 25772-27305 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDCC01000030.1 Enterobacter hormaechei subsp. oharae strain GN02032 contig30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 25772 28 100.0 32 ............................ TTTACGTACTGCAATAAATTCGTCTTTTGTAA 25832 28 100.0 32 ............................ GATGACGGCACGACGGTCGCGATGTTTTTATA 25892 28 100.0 32 ............................ CATCTGAGTCAGTCGTGCGAGCTGACGTTCGC 25952 28 100.0 32 ............................ CGTATGGTGAACTCCGGTACCGAAGCGACCAT 26012 28 100.0 32 ............................ CCGTAACGGCGTGGCGCAGCCGCTGCGTCTGT 26072 28 100.0 32 ............................ ATGACAAAATTGAAGCTGTTTTGGAAAGGCTG 26132 28 100.0 32 ............................ ACGATTCCCGGTAGCCCTAAGCCCTGGAAATC 26192 28 100.0 32 ............................ GTGTACTTCGACGGATATACCCACTACAGCAC 26252 28 100.0 32 ............................ AGAAACGCTATTAAAGGGAAAAATATTCATAC 26312 28 100.0 32 ............................ GGCACGCTGTCGGCGGGCAGTTAGTTGAAGTC 26372 28 100.0 32 ............................ ATTTCAAACTTTTCCCGGCCAACATGTATAAC 26432 28 100.0 33 ............................ TGACGGGCAGAAGTACACCGATACGCCGATCCC 26493 28 100.0 33 ............................ ATACAGGGCTGCCGCTATAGTGCAAACCAATAT 26554 28 100.0 32 ............................ AATCAACGTGAACTTTCATGGCGCAGAACTGT 26614 28 100.0 33 ............................ TGGCAACTCGATAACGGTGGTTTTACCACGCGC 26675 28 100.0 33 ............................ GACGTGAAAAACATCCACGAAGCCCGGTCTTTT 26736 28 100.0 32 ............................ TTCATTGTGATCATGCCAATCGGTGTATGGTT 26796 28 96.4 32 .........G.................. TGCCTGACTTCCTTCGACTGGGTGAAACGTTC 26856 28 100.0 32 ............................ AGCATCATTCCGCGGCGTGCCGTTCAAAGTCT 26916 28 100.0 32 ............................ CGCGTGCTGGTGCAGAACGACAGCGATATCCA 26976 28 100.0 33 ............................ AGCCGCCTGTTTACCAGTGATGAAGATGCGTTC 27037 28 100.0 32 ............................ TCGTTGCGGGTTGATCAGCATGTCGTCGATTG 27097 28 100.0 32 ............................ TGTGAACTGAATGAGAACGCCGACGGCGTTAG 27157 28 92.9 32 C.....................C..... TTGTTGCTGATCACCCTCCCGTTGTCACCCGG 27217 28 89.3 32 ..A......T..........T....... CGTTGAGTTTCTCGAGCCACGGTTTTGACATT 27277 28 85.7 0 ..T.................T...T..C | T [27297] ========== ====== ====== ====== ============================ ================================= ================== 26 28 98.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGACCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGAGAGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGATATTTGACCCTAATTTTTGCCCAGAATGTAATGTATTGATTTTTAGATTAAAAATCCTGGGGTGTAAAAAAAGGGTTTGAGCAGTGTTTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : CATCCAACGCAGCAGCATTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAACCCGAAACCAAACCCGAAACCCAACCAATCGTTCAAATAATCGACTGTGCTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //