Array 1 336-8 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEMT010000017.1 Marinobacterium sp. 3-1745 102_342_30723, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 335 28 100.0 32 ............................ AATCTTGAGGCGCAGTGCCCTCTGCACCACGC 275 28 100.0 32 ............................ TCTTGCGGATGGCATGCAGTACTTCCATACCG 215 28 100.0 32 ............................ GAAGTTCAAGCAAGAGGCTGAAATGTTCAATG 155 28 100.0 32 ............................ CGGACGGCACTGTTATTAATGCCGTGCCAGAT 95 28 100.0 32 ............................ TGGTGCTGGGCACGCTCCTGCTCAGTGAAATA 35 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTGAGAAA # Left flank : AATACA # Right flank : AAGGTACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTGAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [6.7-10.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 116710-113140 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEMT010000050.1 Marinobacterium sp. 3-1745 227_147548, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 116709 28 100.0 32 ............................ GTTGGTTTCGGGCGCTCCGCGTGTTCCACCTG 116649 28 100.0 31 ............................ CAGGCGCTGAACCTGCCCTAGGTAATAATAC 116589 28 100.0 32 ............................ ATCTGTTGACGTTAGGCTGATGCCAATGCAGC 116529 28 100.0 32 ............................ GGCGAGAAAAAGCAGGGCAACTGGATCGATGC 116469 28 100.0 32 ............................ CAGGTGGGCGGGGCGGTGGGCCTCTCCGGCGT 116409 28 100.0 32 ............................ AGCTGGGCGCTTTCGTGGTGGTCAACACACAC 116349 28 100.0 32 ............................ AGAGGAAGAAGCAAGGCTGCTGAAGGTATACC 116289 28 100.0 32 ............................ GAAGGCAAAGCAAAATTTATCATCAAGTAAAA 116229 28 100.0 32 ............................ GAAGTCACTCAACCAGGCGAACGGCGGTTACG 116169 28 100.0 32 ............................ AGGATGAGGCGTTACTGAATGCCATGGCGGTT 116109 28 100.0 32 ............................ GGACACGGCCCCGGCTGAATACGTGGTCAGGG 116049 28 100.0 32 ............................ AAGGAGGAAGAGAAAAAGCAGCTCGAAAAGGA 115989 28 100.0 31 ............................ CATACAGGTCTTTTACGGACTGCTCGCTTTT 115929 28 100.0 32 ............................ TGGAGGCCATCTTCAGCACGGACAAAAATCGG 115869 28 100.0 32 ............................ AATGGAAATACACTGGATAAAACCATGTTCGT 115809 28 100.0 32 ............................ AGCGTGCGATAACCATGGGCTTCTTTGATCAG 115749 28 100.0 32 ............................ AGCATGGGCTTATTGCAAAGATGCTGCATCAT 115689 28 100.0 32 ............................ TGCAAATACGAGCTGGGAGAGCTGGTGTTCGA 115629 28 100.0 32 ............................ ATCAACGCACCGATTCGATGGCGGAATTCTGC 115569 28 100.0 32 ............................ ATGCAGAAGTACAACAAGCTCGGCGTTGCGGT 115509 28 100.0 32 ............................ TAGGTGCGACAGCGCTAGGGCTAAGAAGCGAT 115449 28 100.0 32 ............................ TGCCATGCGGATTTCAATCACATCGTGGCCGG 115389 28 100.0 32 ............................ TGCAGCAGCTATCAGATGCCATCAACGAAATC 115329 28 100.0 32 ............................ CAGCATGCTGACTCCATGATATGTCCGATGCG 115269 28 100.0 32 ............................ CACTATTGAAGATCTTTTTGCCGACGACGAAA 115209 28 100.0 32 ............................ CAAAAGGACTACACCCAGACGTCCGCATCTAC 115149 28 100.0 32 ............................ ATAAAACTGAACCAGCAGGTGACACATGGCAG 115089 28 100.0 32 ............................ TTACGGCTATCTGCGCTGACGGAACGTACAGC 115029 28 100.0 31 ............................ CAATCGCACTACCAGCCGCGACGGTCAATGC 114969 28 100.0 32 ............................ AGCCTGCGCGGCGCGTTCGGTAAGTGCGACAA 114909 28 100.0 33 ............................ AGAGGGATGATGGCATCGGCGCTGATGAAAAAT 114848 28 100.0 32 ............................ CTTCTCCTCGTGCGGGTCGTCCACGATGTATT 114788 28 100.0 32 ............................ TGAGTGGCTGAAGCGTCAATACGGAATCAACT 114728 28 100.0 32 ............................ TGAATCAGCCGCGTAGACCGTGCCGAGGATCA 114668 28 100.0 33 ............................ CCGTACCTGCACGGCCCTAACGATTTCCCACAT 114607 28 100.0 32 ............................ TGTCCGGGGCAGGGGTCTAGTGGGGAACTGGT 114547 28 100.0 32 ............................ GATAGGGTAGAAACCTATTGCTCTATCCAATT 114487 28 100.0 32 ............................ CTGCGGCGGCTGTGCATCTGTTTTGCCTTGCT 114427 28 100.0 32 ............................ AGCAAAATTTCTACCTGTTCGTCATACGATTT 114367 28 100.0 32 ............................ CACGTGTGCCCTATGCCCGTCCGTCGCGTAGC 114307 28 100.0 32 ............................ TGCGCTAATGACTTAATTCGACCAGGGACTAC 114247 28 100.0 32 ............................ AACACCTGACCCCATACGGGTCAGCAGCTCTT 114187 28 100.0 32 ............................ AGCATGGGCGCTACGTTCTGGCCTGGTGAATT 114127 28 100.0 32 ............................ GTTGTGGTCCGCGACTTGGAATGTTTCGCCCC 114067 28 100.0 32 ............................ GCGAAAGCATAGTGGGGCCACTGTTGCCGAAG 114007 28 100.0 32 ............................ TCGGTCTGCCTCACCTGCGCCTCGGTTATCTG 113947 28 100.0 32 ............................ TGCCACGTCTGTATTTCAAACTCTGGGTAACG 113887 28 100.0 32 ............................ TGACATATCAGCGGGAGCATCGCCCCAGATAT 113827 28 100.0 32 ............................ GGTGCGTTCCAGTTTGATGTGGCGATACTGGT 113767 28 100.0 32 ............................ GGGGAGCGTGTGATGACCCGGCCTTCGATTTC 113707 28 100.0 32 ............................ GACAGTGAGCGCCACCACGTTCATGATCAGAT 113647 28 100.0 32 ............................ AGGAGTTACCGGGCTGGGCCGTACTCTCCGCC 113587 28 100.0 32 ............................ GTCAACTTCGATGATCGAGCTGATGAGGGCAT 113527 28 100.0 32 ............................ CACGCACCGGACATGCCGCGGCGATCTGACCC 113467 28 100.0 32 ............................ AGGCCGCCATGTTGGGCAGTAGCGCAACCGGC 113407 28 100.0 32 ............................ TCGCACGATACCCATGAGTCCCGGTAAGAGGA 113347 28 100.0 32 ............................ TCGACGCGGCGTTCTACCCGATTTGGGGAGCA 113287 28 100.0 32 ............................ ATTCGGCGAAACCTACCTGCTGCAACGCCCGT 113227 28 100.0 32 ............................ TCTTGCGGATGGCATGCAGTACTTCCATACCG 113167 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 60 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTGAGAAA # Left flank : TGCATTATCACAGCTGATGATGCAGAACTGGCTGAAAGGCATGTCTGATCATATTCAATGCTCGGACATCCTGCCGATCCCCGAATCAGTACAATACCGGACCGTTTCCCGGCGTCAGTTCAAAACCAGCAGCGAACGTCTGCGCCGGCGCCGCATGAAGCGCAAGGGCGAAACCTGGGAACAGGCAGCAGCCGCAATCCCTGATAGTGTTGAGCGCAGACCGGATCTGCCTTATGTGCACCTGAGAAGCCAAAGCACGGAGCAGAGTTTTATTCTGTTTATAGAGCAGGGCGAGTTGAGGGAACAGCCGACCAGTGCCGAGTTCAATACCTATGGGCTCAGCCGGCAGGCAACGATCCCCTGGTTTTGACCCTTTTTCGGGGGTACAGAAAACCACACTGCTAAATCAAATACTTACCTGCCCCCTTGAGAAAAGGGGGCAGGCAGGTATTTGTGTATTTGTTCTTTAAAAATCAGCGAGTTATAGCTTTATTGTTCTA # Right flank : TGTAGATAAGTACGCCGGGTGGGAGTGGTTGGGTTCGCTGCCGCACAGGCAGCTGAGAAATATTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACTTGTTCGCTGCCGCACAGGCAGCTGAGAAACAGCCCAGTTCGAACAGGTGGCTAACGCCCTCGTTCGCTGCCGCACAGGCAGCTGAGAAAATCGCAAGCGCAGACTCGGCGGCGTCCTGTCCGTTCGCTGCCGCACAGGCAGCTGAGAAAGCGCTCTACACTGCTGATCGTCAGGCTGGCACGTTCGCTGCCGCACAGGCAGCTGAGAAAGGACAGCTGCGCGTCGTATGTATTGTCGCGGTGTTCGCTGCCGCACAGGCAGCTGAGAAACATCTGGCACAGCATTGATCACCGTGCCGTCCGTTCGCTGCCGCACAGGCAGCTGAGAAATGTAGATAAGTACGCCGGGTGGGAGTGGTTGGGTTCGCTGCCGCACAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTGAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2-329 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEMT010000020.1 Marinobacterium sp. 3-1745 114_336_33235, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2 28 100.0 32 ............................ AGGTACACGCGATCGCCAGCTGCATAGGGTGT 62 28 100.0 32 ............................ AGCTGCGAGCGAGCGGTTTTCAGTCGCTGCTC 122 28 100.0 32 ............................ ACAGTGCTCACTGATGAACTGGTCAGCCTGCG 182 28 100.0 32 ............................ CAGTCGATCATAATGTCTGACGGCGAGCGGAA 242 28 100.0 32 ............................ AGCTGCTGGATGACAGGGTGTCGTCACAGTCA 302 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTGAGAAA # Left flank : AG # Right flank : GCTGCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTGAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [1.7-3.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 209-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEMT010000021.1 Marinobacterium sp. 3-1745 129_208_28975, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 208 28 100.0 32 ............................ AGCTGCTGGATGACAGGGTGTCGTCACAGTCA 148 28 100.0 32 ............................ GCTGCTGCAGAGTTGGACGCACATCGCGACTT 88 28 100.0 32 ............................ CAGCCCAGTTCGAACAGGTGGCTAACGCCCTC 28 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTGAGAAA # Left flank : | # Right flank : A # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTGAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //