Array 1 228578-231658 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWKZ01000004.1 Klebsiella pneumoniae strain VRES0177, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 228578 29 100.0 32 ............................. TTGACCTCGCCGCTTCCGGCGTCGCCTACAAA 228639 29 100.0 33 ............................. TGCATCAGGAGTGTTGGATACTCAATTCCAGGC 228701 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCACGTGGG 228762 29 100.0 32 ............................. CTCCGGGCGAATTTCGCGCCCGTCTACCGTCG 228823 29 100.0 32 ............................. TCGGAGATCAGCACCGACCACCACAACACCCC 228884 29 100.0 32 ............................. CACCACCATCATTAACCCCTGAAGAAGTGGGA 228945 29 100.0 32 ............................. TGTTACTAACCCTTCATGTGTGATACTTTCTA 229006 29 100.0 32 ............................. ATTTCTTCACCTGCATAGAGCAGTTGCGCCAT 229067 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 229128 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 229189 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 229250 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 229311 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 229372 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 229433 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 229494 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 229555 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 229616 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 229677 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 229738 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 229799 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 229860 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 229921 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 229982 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 230043 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 230104 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 230165 29 100.0 32 ............................. ATAATACTGTATACATAAACAGTATTTGAGGG 230226 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 230287 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 230348 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 230409 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 230470 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 230531 29 100.0 32 ............................. CGCGCGCGCTGATCCTGGAGGGATACCGGGAC 230592 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 230653 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 230714 29 100.0 32 ............................. AGCCGATGCCTACAGTCACAGCAGGCGGCCAG 230775 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 230837 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 230898 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 230959 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 231020 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 231081 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 231142 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 231203 29 100.0 32 ............................. CCACTCAAAAAAGGTCGAAGCCAAAAGGTTAT 231264 29 100.0 32 ............................. GGGAGCTTTCATTTGATCAGGCATTTGAGCAG 231325 29 96.6 32 ..............T.............. AGCGGCCGTTACGTAACTTTTCACGTAACAGC 231386 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 231447 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 231508 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 231569 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 231630 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //