Array 1 60653-60136 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CACSKM010000002.1 Raoultella sp. 18117 isolate 18117_WYC42_D4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     60652	    29	 100.0	    32	.............................	GCCCCGTTGACCTGCTTATCGTCCTTTTTCGC	
     60591	    29	 100.0	    32	.............................	ATTGTTTTTCTTAAAATGTTTACGTTGGATCA	
     60530	    29	 100.0	    32	.............................	CGCGATGTTGAATTTGCGTCAGGATGAAAGCC	
     60469	    29	  96.6	    32	............................A	GCTCCATAAAAATCGCGCCGAGGAAATCATGA	
     60408	    29	 100.0	    32	.............................	TGATGATTCAGGATGCGTTTATTCGATTACGA	
     60347	    29	 100.0	    32	.............................	ACACTCACACCGGTTCAGATCGCTGACGCAGA	
     60286	    29	 100.0	    32	.............................	GCGACTGTTAACCAGCGGCTGGATACATTAAC	
     60225	    29	  89.7	    32	.T........T................A.	ATGATCTGGATAAACTCCGCGAAGAGTATGAA	
     60164	    29	  79.3	     0	TG.......A.C.......AT........	|                               	
==========	======	======	======	=============================	================================	==================
         9	    29	  96.2	    32	GCGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TAAGCAGGCGTGGTCGGAATAAACGAAGCCGGTTCCTCGCAGCTCTTTTCCCAGCCAACCTTGCCCGGCCTGTTCCTGCCATTCTGGCGCTAAAATATGCAGTATCGGTGGCTGACGTTCATCGGGCAGTATCGCTTTGCGTTCCCCACCGGCAGTGCGGATATGGCGCTGAAGTCGACCGGCGCGCTGGATCAACAAATCTATTGGCGCCAGATCCGAGATCATCCAGTCAAAATCCAGATCGAGGCTTTGTTCGACAACCTGAGTGGCGATTAACACTTTCCCCCGCCGCGCTGAAACGGGGGCATCTTTACCGAACCAGCCGAGGGTTTTATTCTCAATGGCAATACGATCGGCAAAGGCGAAGCGGCTGTGGAAAAGTAGCAGATCCTGTTCAGGGATGCGCTTTTCATGCAACAGCTGCTGATAATCTTCGCGTGCTTCATCAACCGTATTACGGATCCAACATACGCATTGCCCGGCTTCGACTGCACGATAAA
# Right flank :  CATTGTGCATTACTGCCAGATAACGTAGGAACGTACTCTTCCACGGCTGCAGCAAAACGCCGGCTAGCCGTGCTTATTGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGGCGCTCGATGCGGCCGGGCAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCAGATGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCGAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAACGCTGGCGTCGTTACAGCAGTCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGGGCGATGGCCAGCGCCCGGTCGCGGGTCAGCTTGCGAATCGCCGCCGGTGTGCTGCGGCCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGGTTAT

# Questionable array : NO	 Score: 6.07
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GCGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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