Array 1 2798131-2784351 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP080624.1 Acidiferrobacter thiooxydans strain ZJ chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 2798130 28 100.0 33 ............................ TACGGCTTGCTCAAGGAACCGTGCAGCCTGCCC 2798069 28 100.0 32 ............................ ATGATAACGAGCACCGTTTGAGAGAGGACCGG 2798009 28 100.0 32 ............................ GTAGCGCGTGCCATCCTGCGTTGGCAGGACCG 2797949 28 100.0 32 ............................ AAGGCGCAGAGGACCCGCGAGCAATACAGCGC 2797889 28 100.0 32 ............................ ACATTTGACCGCATCATAGCGCGCCACGGTCT 2797829 28 100.0 32 ............................ TCGAGGCCTACGCCGACGAACCCCACGCCGAG 2797769 28 100.0 32 ............................ TTGTTGGTGCCGTCGGGCGCGGGCTCGGCGCG 2797709 28 100.0 32 ............................ ATGACCCAATCGGCGCGCTCCCAGGGCGCCGC 2797649 28 100.0 33 ............................ CAGTCGAATGCCCACTGGAAATACTCGGATGTA 2797588 28 100.0 32 ............................ GTACAGCTCGGCGAAGACGCCCATGACGTGAT 2797528 28 100.0 32 ............................ GCTGGCTGGAACTGGCGCCCGCAGGGCATAAC 2797468 28 100.0 32 ............................ GTTGTACATCCGTCTTTTGGTCGGATAAGCGT 2797408 28 100.0 32 ............................ ATCGACCACGGCCCGCTTGATGACGTGATAGA 2797348 28 100.0 32 ............................ CTGAAGGATGGCGGCGGGTGGCAGACTAGTAA 2797288 28 100.0 32 ............................ GTTTCGGGCTCGTAGTGAAGGTGATGGCATCC 2797228 28 100.0 32 ............................ CACGGATTTTCGCATGCGTGAAAGCCCGACTC 2797168 28 100.0 32 ............................ AATATCAGCTTCACCAATGCCGCCGGTGTGAC 2797108 28 100.0 32 ............................ GATTCCGCACGACCTGAACGCCGCCGATGCAC 2797048 28 100.0 32 ............................ CTGCGCCGTCAGGATTTCGCCAGACGTATAGG 2796988 28 100.0 32 ............................ GTTTTGAGGGGACAGGAAGGCACTGTCGCGCA 2796928 28 100.0 32 ............................ GTGGACGTTGCGGCGGCAGAGAGCGTCGTCTG 2796868 28 100.0 32 ............................ GCGTCCAAGTTTGCCCAGGCGGTCGCTATGCT 2796808 28 100.0 32 ............................ AGCTTGAGCAGAGTTTTGCAGGACCGGCACCG 2796748 28 100.0 32 ............................ AACTCAAGCTGCACCTGACCAAGAAGGTTTGT 2796688 28 100.0 32 ............................ GATGAGGGTGAAGAGTGATGCGGAGGATATTG 2796628 28 100.0 32 ............................ TCCGCGTCGCGGGCACCGGATTACAGCCGCCT 2796568 28 100.0 32 ............................ AGAGGGCCGATTCCGTGGAAAAACTCGATAGC 2796508 28 100.0 32 ............................ CGAGACACGCTACCTGCCCTCGGGCACCGCGA 2796448 28 100.0 32 ............................ TATCTGCAACGGTACACGCTCATGGCGGCGAC 2796388 28 100.0 32 ............................ AGCTTAAATGGCCAGTCGCAGAGGCATAGTCC 2796328 28 100.0 32 ............................ GCCGCCTTCGCCGGCGCCCCGGGCGAGTCCAC 2796268 28 100.0 32 ............................ CGTCCCTCCGCGCTGATGAGGTGACGCCCAGC 2796208 28 100.0 32 ............................ TTCCGTTGTAGGAGCCTCTCCATGGCTCCATC 2796148 28 100.0 32 ............................ GCTTTCGAAATGTCCGATGCGGCATCCGTGGC 2796088 28 100.0 32 ............................ TTGACCAACGCCCAAAATCAGCTAGCGGCCTT 2796028 28 100.0 32 ............................ TGTCAGCACCACGCGTGTGGGCCGCACGGGAC 2795968 28 100.0 32 ............................ GCTGCCCCCGCCCCGGCCCCGGCCGCTTCCGA 2795908 28 100.0 32 ............................ GTCTTCGGCTCTGCGGCTGCCTACACTACCAC 2795848 28 100.0 32 ............................ AACCGGGGACCTCTCGCTGGGCGTCACCTCAT 2795788 28 100.0 32 ............................ GTCTGAGTCGCGGCGTTTATCAGCGTGATCGG 2795728 28 100.0 32 ............................ ACGGCCAGCGCCCCGCCGCCCCAAAGGTACGG 2795668 28 100.0 32 ............................ ACTCGGCAGATCATTCCGGCTCAAAAGTCGCC 2795608 28 100.0 32 ............................ CACCCCACCGGCGATGATCCACCGGGTATAAC 2795548 28 100.0 32 ............................ AAAGACGTGAAAGCAATCTCAAGCGATCCACA 2795488 28 100.0 32 ............................ AGTGATCGCGCCGCCTTAATCGAATTTGCGGA 2795428 28 100.0 32 ............................ ACTCACTCCTGGCATGCCGGGTAGAAGGCTGT 2795368 28 100.0 32 ............................ ACGAGTAGCACGGTTCCGCAGGGGGCGTGTGG 2795308 28 100.0 32 ............................ TCATCGCCGTTCGGTTCTACCGACATGGGAAA 2795248 28 100.0 32 ............................ TTGTCCGTTGTCTGACGTTAACTTTTGTTATG 2795188 28 100.0 32 ............................ ATAGGCTACGCCAGCGGCCAGGACGGCTGGTT 2795128 28 100.0 32 ............................ ACACCTTCGGATGCGCGCGGGCCAGCCCTTTA 2795068 28 100.0 32 ............................ TATGCGGCGGCCCACTCGGATGACGACGCGGC 2795008 28 100.0 32 ............................ TTCGCGATCATCACGTCGCGGTCAGTCAGTGC 2794948 28 100.0 32 ............................ CAGAACCCCACCGGCCAGAAGGTTCGTGCCGA 2794888 28 100.0 32 ............................ GCGTTGGCTGTTTTGGACCCGGAGCACCACGA 2794828 28 100.0 32 ............................ GACCGCCGACCTTGTGGGTCTGGCGCGCCACA 2794768 28 100.0 32 ............................ CAGCGCTCGGCCTGATCGGCGGGCATCTCAGT 2794708 28 100.0 32 ............................ AGACCAACCCCGCCGTCACCGTCCTGGTGGAC 2794648 28 100.0 32 ............................ ACTGAGAGTCAAGGATGCTAGCTGTGATTTTC 2794588 28 100.0 32 ............................ GCCGGGCTCCTAGTTCCCCCTTTCGGCCAGAT 2794528 28 100.0 32 ............................ ATCTTATGCCGCGTTCCAGCGCGCCACGGCCT 2794468 28 100.0 32 ............................ GCAAAATAAGTACCGCCCTGCTCTGTCTGCCA 2794408 28 100.0 32 ............................ ACGAGCCTACGCCCACAAGGCCAAGACCATTC 2794348 28 100.0 32 ............................ TCGCGGGTGACCGCACCATTGGTAGCGCGCTC 2794288 28 100.0 32 ............................ CGGCAGCTCGGTGTCACCTCGATGATGCTGGT 2794228 28 100.0 32 ............................ GTGATTTCGTCTCGGATTTTGGCCCCGCGCAG 2794168 28 100.0 32 ............................ CCGTACAGATTGGCCTCGCGCAGATTGGCCCC 2794108 28 100.0 32 ............................ TCCGATGCGGCGCCCGCTGGGTGCCGCGCACG 2794048 28 100.0 32 ............................ GTGCGGCTCCCTCCCAAGCGACCCTGCATTGA 2793988 28 100.0 32 ............................ AAAATGGGCCGGATTCATGCGGATGCGACCAA 2793928 28 100.0 32 ............................ TGTACGGGGCCAATCTGTACGGGGCCAATCTG 2793868 28 100.0 32 ............................ ATGCTGGGCGCAAGAGCCAAGGATGCGGCTCG 2793808 28 100.0 32 ............................ TCACTGACGGACGGCTTTCCGCCGCTGTGCTT 2793748 28 100.0 32 ............................ AGCCAGGAACCGGACGGCCCGTGGTTCACCCA 2793688 28 100.0 32 ............................ TGCAACGCTACACGCTGATCGCCGCAGCCGGG 2793628 28 100.0 32 ............................ GACATCGGCTCTCTCTACCAGCAGTTGGTCAC 2793568 28 100.0 32 ............................ TCCGTCGCCGAGTAGGTGTGCGTGTTCGTCTC 2793508 28 100.0 32 ............................ ACATACTGATCCTCGCCATCCACGAGCGGCAT 2793448 28 100.0 32 ............................ TGTCACGAGGCGAAGATGAGCGCCTGGCTCGA 2793388 28 100.0 32 ............................ ACTCGCGCAAGAAAGATCGGGCGGCTATTGAC 2793328 28 100.0 32 ............................ TCTGTGACGTTCGCCTTCGGTATCTCGGCCAG 2793268 28 100.0 32 ............................ ATCTGTTCGCGGCCCTCGAGGGGCTGACGAAC 2793208 28 100.0 32 ............................ TAGTCGGCTGTTACCATAAACCGAAAGAGAAA 2793148 28 100.0 32 ............................ GTGGGAAACGGGGCTTGAGAGAGGTTCATGTA 2793088 28 100.0 32 ............................ ACAAATTTATGACCTACCTCTCCCGCCAAGAC 2793028 28 100.0 33 ............................ GTATGAGCCCGTGAAGTCGACCTCTGTGACGTT 2792967 28 100.0 32 ............................ GCGACTAAAGGCTCGGTGGGCTCGGTGGTCTT 2792907 28 100.0 32 ............................ GCGACTAAAGGCTCGGTGGGCTCGGTGGTCTT 2792847 28 100.0 32 ............................ TGGGCGATGGCTTCGGCGCGTGCCTTGGCTTC 2792787 28 100.0 32 ............................ GCGCCCGTGGGTCGCGGTATCCGTCGAAACAT 2792727 28 100.0 32 ............................ ACACACAGGCGCCTTCGGGGGTCTTTTTTTAT 2792667 28 100.0 32 ............................ TCATTCAGTCGATAGGATTGGCGGCTTGGGTG 2792607 28 100.0 32 ............................ ACGAAACGATCTCCGGTCATTGCGGCGCGCAG 2792547 28 100.0 32 ............................ ATCATCCCCTTACCTTCCAGCATCTTCAAACC 2792487 28 100.0 32 ............................ ACCACATAAACCAGGAAGGCAAAGAACAAAGC 2792427 28 100.0 32 ............................ ACGTCGCGCCATTTCCGTATGGATGGGAAAGC 2792367 28 100.0 32 ............................ TGGGTGAGCGCGAGGCGGAGTATCGGAGGATT 2792307 28 100.0 32 ............................ AATAAACTAACTATGGAAACGCGGCGCCTTTT 2792247 28 100.0 32 ............................ CAATCGGGGACAGTGCCCAGGGGTATCATAGA 2792187 28 100.0 32 ............................ CGATCCGATGACGTTTGCTGTGTTAGCATTAT 2792127 28 100.0 32 ............................ ATATGTCATCCTCTATAGCGGGAAAGCGGGCG 2792067 28 100.0 32 ............................ TTTCTTGACGACCTTTGGTGGCGTGGCGGTCT 2792007 28 100.0 32 ............................ ATGCTTTCCTTCTTCTTCTTTTCCTTTGCCAT 2791947 28 100.0 32 ............................ GCTGGCAAAGCGCAGCAAGACCCACGCAAGCT 2791887 28 100.0 32 ............................ AACCCCCCGCCGCCGCCCGGCCCAGCCTACCA 2791827 28 100.0 32 ............................ GGCTTATGGTCGTTCCGGGCTCGCGTAATCTC 2791767 28 100.0 32 ............................ GCACCGTACCGATAGCCGCCTATGGTCGTGCC 2791707 28 100.0 32 ............................ AACGGGCGCGGCTGGAGGACTGATGGAACTAC 2791647 28 100.0 32 ............................ GAGATCAGCGAGCAGCTAAAGCCGGAGGGCAA 2791587 28 100.0 32 ............................ ATATCCATGGAGTGACACCCGGTGGCAGTTCT 2791527 28 100.0 32 ............................ TTGAGGAGGCCCTAGACGAATCCAGCCTATCC 2791467 28 100.0 32 ............................ TTCTCGTAGAGCGCCGCGCCCGATGTGGCCGC 2791407 28 100.0 32 ............................ TGCGTTAAAGGTGACTTCGGAGAGGTCCACAT 2791347 28 100.0 32 ............................ CGCCGGGGCCCGGCTTACAAGGCGGCGGCGCG 2791287 28 100.0 32 ............................ TTCGTAAACGTACACGGCCAGTTGTTCCGGTA 2791227 28 100.0 36 ............................ CGCCATCGGCGTCGTGACAGCCGGCAAGAGCCCGGT 2791163 28 100.0 32 ............................ AATAAGGCCAGAAACGCCATCGGTGGAGTCAT 2791103 28 100.0 32 ............................ AGCCAGAAGCCGCAGGTCGCCGGTCTGTCGAG 2791043 28 100.0 32 ............................ ACGAGATCATCCTCGTGCCAGCGCGTCATAAT 2790983 28 100.0 32 ............................ GGGCTGGCCCGGTTGCCGTGTGCGCCTTCCAA 2790923 28 100.0 32 ............................ GAGAACGCAGCCTGCTTCGCCAATGTGAAGGC 2790863 28 100.0 32 ............................ GTAAACGGCGCCCGTCGGTGCGCTATCCGCTC 2790803 28 100.0 32 ............................ GTTTCGGCGGTGGATCAGGCGGGATCGCGAGC 2790743 28 100.0 32 ............................ GAGAACGCAGCCTGCTTCGCCAATGTGAAGGC 2790683 28 100.0 32 ............................ TGGCGGTCCACGATCAGCCGATCGATCTGTGA 2790623 28 100.0 32 ............................ GACAAATTGCTCCATTACAACGCGATGATAAC 2790563 28 100.0 32 ............................ GACAAATTGCTCCATTACAACGCGATGATAAC 2790503 28 100.0 32 ............................ TTTAGCACCGTCTCGGTCAACAGCACGCCCTC 2790443 28 100.0 32 ............................ AATAGCTCGGTCATCCCATGCACCACCGAGTC 2790383 28 100.0 32 ............................ ACAGAGGGATCAACTGAAACTCGGCCTTGAAC 2790323 28 100.0 32 ............................ TGCGCGTCGGCTTCGGCCTTAGCGCGGGCTTC 2790263 28 100.0 32 ............................ GCGACGAGCCATGCATCAGGTGTGGGCGCAAC 2790203 28 100.0 32 ............................ GTCGGGGCGGATGTTTACGCGGTCGTAGGTGC 2790143 28 100.0 32 ............................ AAACATCTTGGCGATGATGGCTTCGCGCGCGA 2790083 28 100.0 32 ............................ CTACCGGCGGTGCTTTCGGTCGGCTTGGGCGC 2790023 28 100.0 33 ............................ TCGAAGCGCAACTCGCCGCGCAGCCGGGCCTCC 2789962 28 100.0 32 ............................ GCAGGAGGGCTCTGGCGCTGCCTCGCCATACC 2789902 28 100.0 32 ............................ TGGAGAACAGGCCGCCAACCCTGGCGAACGTA 2789842 28 100.0 32 ............................ AGACCGCGGCCGATCGCCAGGCGCTCGCGCAG 2789782 28 100.0 32 ............................ GCGTCGCCCATCCCGGCGAGCCCGGTATTGAC 2789722 28 100.0 32 ............................ GATCATCTCCGAGCAAGCGGTACTGCAAGGCG 2789662 28 100.0 32 ............................ GTACAGGTCGGCCCCGCGCAGGTCGGCCCCGT 2789602 28 100.0 32 ............................ AATGCGTCCTCGGGCGAATTCCAGCGGTGGCT 2789542 28 100.0 32 ............................ ACGATGCACCAGGTCTGCGCGCCCACGAGGTA 2789482 28 100.0 32 ............................ AGCATCTTCAAACCTTCCAAGATTCCCGCAAA 2789422 28 100.0 32 ............................ GCTATCGGTTCAGATAACATGCGGTCAGCCTA 2789362 28 100.0 32 ............................ TTCATCCGGCGCTCGATCGGGTATCCCATCTG 2789302 28 100.0 32 ............................ TGCGGGCGCTCGGCTGATAAGCGTGGCTTCCT 2789242 28 100.0 32 ............................ GTAAACGGCGCCCGTCCGTGCGCTATCCGCTG 2789182 28 100.0 32 ............................ TGCGCAACGCCGCCCAACGCGCGACCGCAATC 2789122 28 100.0 32 ............................ TGCAACGCTACACGCTGATCGCCGCAACCGGG 2789062 28 100.0 32 ............................ GCATAAGATCAAGCGACGGATCATGTGGCATC 2789002 28 100.0 32 ............................ GGATTCGTCCGGTGACTGCGACAATCGAAATC 2788942 28 100.0 32 ............................ GTCAATCACTACTACATCCGAGGTCGGGCCTT 2788882 28 100.0 32 ............................ TTCCAGGAACCGTTTGCGCTGCTTCTCCGGCA 2788822 28 100.0 32 ............................ TCGTCGCCGTGGTGTTTGTCATCGCGTACAAT 2788762 28 100.0 32 ............................ TGCTCGACGAGATCGGGCTGCGCGAGGCGGAG 2788702 28 100.0 32 ............................ ATGTCGTAGCGCGTTAAGGAGAACAAGGTTAC 2788642 28 100.0 32 ............................ ATAATCGACGCCACGGCCCGGCCGATCCCCAC 2788582 28 100.0 32 ............................ TCATGGAACTCGCTCGTCAGCTCGTCATACTG 2788522 28 100.0 32 ............................ GGCGTGGTAGGAATCAACATCTGGAACATCAT 2788462 28 100.0 33 ............................ CTGGCGGTCTGCGCCCGGTGGGACGTGCGTGTG 2788401 28 100.0 32 ............................ ATTCGCCCCGGCGTTCAGTGGCCCCCCTACCA 2788341 28 100.0 32 ............................ GTCTAGTCTATCAATCGCGCGGGGTCCTTATC 2788281 28 100.0 32 ............................ TCTTGAGGAATGTTATGCAGAGGCGCGGAAGC 2788221 28 100.0 32 ............................ TATCTTTTTTCTCTCCCCGACGAACGGTACTT 2788161 28 100.0 32 ............................ CGGAGGCGCTGATGAACATTCGCGAGTTTCTC 2788101 28 100.0 32 ............................ CCCACTGGTCGCCCGAGGACGAAGCCGTGCTC 2788041 28 100.0 32 ............................ GAAAGGGCCCCGGCTTTAGCGGCTATGATTAC 2787981 28 100.0 33 ............................ CACTCGGTGGCGTCCGTGTATCCGCTAGCGGAT 2787920 28 100.0 32 ............................ GGATACTCAGTGGATAAGACCACGGCGGCATC 2787860 28 100.0 32 ............................ TGCCGTGTCGCTCTGCGCACGTCGGCCCTATA 2787800 28 100.0 32 ............................ TTCCGCCGCTTGACGGCCCGCCGGAGGGCAGA 2787740 28 100.0 32 ............................ CGATTGGTTTACAGAGAAGACTGAGGAGGCGG 2787680 28 100.0 32 ............................ TAGACGCAGTACCCGAAGGCGTCACGATAGAC 2787620 28 100.0 32 ............................ ATATGAAGCTCACTCTGCAAACCCATCTCCTC 2787560 28 100.0 32 ............................ TACGGACGATACAGACGGACGCCTAACGGCTT 2787500 28 100.0 32 ............................ TGCAACGAGTACAAGGCCGGACGCTGTGGGCT 2787440 28 100.0 32 ............................ TATGAGCGGGCGCCGGCGACTGTAAGCCCGGA 2787380 28 100.0 32 ............................ ATAACGATACGCAACACGCGCCACAATACATA 2787320 28 100.0 32 ............................ AATTCAATCGGCATCGGGCGCCAGACAACGAC 2787260 28 100.0 32 ............................ TATGATAAGGCGGTCCATATGCTGATCGGGGT 2787200 28 100.0 32 ............................ AACAGCACCAATACACTGTGGGCATGCCCAGG 2787140 28 100.0 32 ............................ GAAGAGGCGCGATAGGAACTCGAGGACGTACC 2787080 28 100.0 32 ............................ GATGGGTGGACCAAGCTCAGCCCGTCCCAGGT 2787020 28 100.0 32 ............................ TTTGGCCCGACTTTCGGCTATGACCACTGGCA 2786960 28 100.0 32 ............................ TGATTATCGGCGCGTCGTGCCTCTCACGGTAT 2786900 28 100.0 32 ............................ ACTGAGTATCCCGGCTTTTGCAATTCCGCCTG 2786840 28 100.0 32 ............................ GTGAAAGTCGTGACCGCAACGCGCGGTAAAGT 2786780 28 100.0 32 ............................ AGCAGCAGCAGCGCATCCGGAGCCGGGAGCGG 2786720 28 100.0 32 ............................ CTGGTGTGGAGATAGGAGGAGCCCCGTCGGAG 2786660 28 100.0 32 ............................ GCTGGGTGCTTTGCGAAGTTGTGCAACGGCGG 2786600 28 100.0 33 ............................ CATAGCCTGCGAAGTAGCCGGCACCGCCGTAAG 2786539 28 100.0 32 ............................ TGGGCGACAGCTTGAATATCGGCGATCAGGGA 2786479 28 100.0 32 ............................ TGCCTGCAATGCGCCGCCGCCGGCCTGGTAGT 2786419 28 100.0 32 ............................ ATAGGTGAGAAGCGTCTGAATCTCGGTCGTGT 2786359 28 100.0 32 ............................ TGGACGCGGCCGGCATGGACGAAGGCCTCTTT 2786299 28 100.0 32 ............................ TACCCGCGCAGCGTCAAGCGGTTCCGGGATGA 2786239 28 100.0 33 ............................ TGTTAGAAGCTGGGCTTTGGCCTCCGCCTCGTC 2786178 28 100.0 32 ............................ ACATGACGGATACGGGAGAACTGCATCTATGC 2786118 28 100.0 32 ............................ TCCCAAGGATCGGCAGACATCACAACAATCGC 2786058 28 100.0 32 ............................ TGGATGATTTGAAGCAGTCGCGCAACTTTAAG 2785998 28 100.0 32 ............................ AAGTACAAGCGCCAGTTTAAAGTGGCAAACCA 2785938 28 100.0 32 ............................ TGCGGTATGTCGGTACTTAATCATTCAGGTCT 2785878 28 100.0 32 ............................ TCAAGGTCGAGCTCGATGGCCTTGTGGACCGC 2785818 28 100.0 32 ............................ CGAATGTCAAACAACCAGAGTGTCGAGTTGTA 2785758 28 100.0 32 ............................ AGGAGCTAAATCATGCCACTAAATGGGTTTAA 2785698 28 100.0 32 ............................ GCAAAGGGATAGGTCGCCGCCGAGATATTCAC 2785638 28 100.0 32 ............................ CAGCAACCCCGCGCAGGAAATGACCTCACTTA 2785578 28 100.0 32 ............................ TAGAGGCTCGTCTATCACGGCATTGGCGGCCA 2785518 28 100.0 32 ............................ TGGGGGTGCCGCACGATCCCACCATCGAGCTG 2785458 28 100.0 32 ............................ TCCGTTTTTATGGTCGCCGCGTGGCTGGCACA 2785398 28 100.0 32 ............................ TTATTGGGATAAGCAGCGGGGCTGGCACCCGC 2785338 28 100.0 32 ............................ TTCATGAGGAACTTGCCTAGGCCAAAGATGGC 2785278 28 100.0 32 ............................ ATAACCTCAAACACCTTCAAACGAACCTGCAT 2785218 28 100.0 32 ............................ TGTCAAGGGCTATTCCACTTCGATCTCCGCGA 2785158 28 100.0 32 ............................ AGCGACTCGATGATACCGAAGATGTTTTGGAC 2785098 28 100.0 32 ............................ CGGCCATTGACGGGCCAGCCGGGTCTCGAGTC 2785038 28 96.4 32 .........T.................. GCCCGCACCCGCCGCCGATGCGCCGCGACCTG 2784978 28 100.0 32 ............................ AAAGACCGCGACGACGAGTAAGACCACGGCAC 2784918 28 100.0 32 ............................ TTCGCGGGCTTCTTCAACTCGCGGAGCCAGTC 2784858 28 100.0 32 ............................ GAGGTGGAACGACGCACCCATCGATACGAAGG 2784798 28 100.0 32 ............................ ACCACCATGCCGAGACGCTCGAGGATGGGCAG 2784738 28 100.0 32 ............................ CACTCCGTGCGCAGCCCCTCGCAGTCACGCAG 2784678 28 100.0 32 ............................ AGGTGGATGAGCCACAACCGACGCGCGCTGGC 2784618 28 96.4 32 .............T.............. ACCTTCCCGATGCGCTTTTGGGCGCGGCATTG 2784558 28 100.0 32 ............................ AATGTGCCCAGGCCCACTCCAGGATCCCCGTT 2784498 28 100.0 32 ............................ TTCGTCCGCTTTGGAGCCGGTGGAGGAAAAGA 2784438 28 96.4 32 .........T.................. CGCAGGAAGGGTTGGGCGTGAGTCCCCAGAAT 2784378 28 96.4 0 ............A............... | ========== ====== ====== ====== ============================ ==================================== ================== 230 28 99.9 32 GTTCATCGCCGCGCAGGCGATTGAGAAG # Left flank : TTTCGCCAAAGAGGTCTACCGGCATTTGGCTCACGCGTTCGCCATTCAGGAATTCAGGAGGGAGCCCGGCGCCAAGAAGAAAGAGACACCGCTCCAGCGGGTCAATAGTTTCCTGGACCACGGCAACTATCTCGCGTACGGGTACGCCGCGGTCGCGCTTCATGGTATGGGCATACCGTATTTTCTGCCCGTCTTGCATGGGAAGACTCGGCGCGGTGCCTTGGTTTTCGATGTCGCGGATCTTTTCAAGGACTGGCTTATCATGCCAGCGGCTTTTCGGTGCGGGGGGCAAAACGCGAAGGATGGCGTGTTTCGGGCACAGATCATTGAATTGGCCATGCAGCATGACGTGCTGGATCATGTCATGACCTTCGTTTCAGAGCTTCCTGGGAAAATCATGAACAATCCAGGGGTTATCGGCGCTATGCCAAATTGATCATTTATTGGGCAATGTTGGGCTAGCGCTTTGATTCCCCGTTCTTTTACAATCCGGAATTACT # Right flank : TTCTTTGTGAGAAGAGTCGCCCGGCCAACACCTTTAGGCCCGGGTGTCCAGGCCGCGGTCATGGGGTATCCGCTGCCGGAACGTATCGGCCAGCACGTCCGCGATCCGGGGGAAGCGCGGCTGCCACCCGAGCACCTCCCGGGCGCGGGTGGTGTCGAGGACGAGCGGCCGATCGAGCCCCGCGCTCCACGCCGGGTCGGGACCGATGCCCAGGTAATGGAAGGCTATGCGCACCGTCGCTTGGGCGAGTCGGGGGCTTACGCCGAGGGCAAAACGGTGCAGAGACCTTTGCATACCTTCGAACGAGAGCGAATTCTCGCAAGCGAGGTTGATGGCGCCCGTGGCCGGCGAGAACAGTGCCGCACGGATGGCCGCGGCCACATCCCATTCGTGGACGACCTGCAGGGGTGGGGCCGGGGGGTGCAGACGCGGATAGAAGGGCAGGCGCAGCACTGCTCGCAGGAAGGGCTGGGCGTGAGCCCCCAGAATGATATGCGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATCGCCGCGCAGGCGATTGAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCATCGCCGCACAGGCGATTGAGAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //