Array 1 4015634-4013896 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP023440.1 Streptomyces glomeroaurantiacus strain JCM 4677 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 4015633 30 96.7 31 .............................T TCTCCCTGCGGTTCGTCCCCCGGGTCTGCGT 4015572 30 96.7 31 .............................A TCAACGATCTACAGGCGCAGCTCGCGAAGTC 4015511 30 96.7 31 .............................T CGCCGTCGTCCTCGATGTCGACCTCGCTGCC 4015450 30 96.7 31 .............................T GCTGGGGGTGTTCGTCGGCCCATTTGCAGAA 4015389 30 100.0 31 .............................. TGGGCTGCACCTGCGTCTGCGACAGGGCGGC 4015328 30 100.0 31 .............................. GTGATCTTCACTGGATCAGCCAGATCCAGGC 4015267 30 96.7 31 .............................G AGACCGACCAGCCATGACCACGACCGCCCTC 4015206 30 96.7 31 .............................A CACACCAGCTGACCCCGCTTGTCGACCGCCG 4015145 30 96.7 31 .............................T CGAACCCGGGCGTCGGCTACCGGCTCACCCT 4015084 30 96.7 31 .............................T GCTGCGCCTTGGTGTGGCCGCAGATGCAGAC 4015023 30 96.7 31 .............................A CTTCGATCTGGAGTTCCCCGAGTTCGAAGGC 4014962 30 96.7 31 .............................G GCGAGCTGGAATGTGCCGTAGGCCATCACGC 4014901 30 96.7 31 .............................A CCCGAGGGCGCACCCGGGCAGGTCCCCGATT 4014840 30 100.0 31 .............................. TGACCAACCAGGGTTTCGACGGCCAGACCGT 4014779 30 100.0 31 .............................. CCACGCCCGGCGCCTTGGCCACGGACAGGTT 4014718 30 96.7 31 .............................T TGCCCTCGTCGTCGTAGACCTGCACGTCGTA 4014657 30 100.0 31 .............................. CGTCGTCCGCTGGCACCAGGACCAGGATCCT 4014596 30 93.3 31 ............................TG CTGCCCCTGCCCGGACCCCGCCTTCGTCACC 4014535 30 96.7 31 .............................A CCCGCAACAGCCTCCACACCGCAGCCGCCAC 4014474 30 100.0 31 .............................. TGTCGGGGTCTTTGCGCAGCTCGGCGATCTC 4014413 30 100.0 31 .............................. CCTCGATGTCGAGGGGGGAAAGGTTCGTGAT 4014352 30 96.7 31 .............................T CCAGAAACTCGGCCGTCCCCCAGGTCCGGCC 4014291 30 96.7 31 .............................A CCGTCAAGGACGCCGTCAACAGCAGCGGGAA 4014230 30 93.3 31 ....................A........T TCGCGGCGTGGGACTCGATCGCCCGCTCCCA 4014169 30 96.7 31 .............................A TGGCCGGCCGCGTGGAGACGGTGTTCATCGT 4014108 30 100.0 31 .............................. ACGGATGTGGGAATCGATCACCGACACCGGC 4014047 30 100.0 31 .............................. GTGAGCTTGAGGCTGGCGAACAGTCCGACGA 4013986 30 96.7 31 .............................T GGGGCTGGGCGAGGCCGAGCTCAGCGACGGT 4013925 30 90.0 0 ...........TT................T | ========== ====== ====== ====== ============================== =============================== ================== 29 30 97.3 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGC # Left flank : TCACTCTGTACCGCTGCGAACGCTTCAGGAACCTGGGCCTGGAACGGAGGAGTGATCTTCCCCAGGTCATGAAGCCCTGCCCAGAACCCCAGCACCTGCCGGGTCTCGGCCACGGTCATCCCCAGCGACCGCGCGATCCTGTCACGCATCTGATCACTCAGCAGTGCATCCCACAGAGCTCCGAACACCGCAGCGCTGTCCAGCAGATGACAGATCACTGGGTACGGACGTGGAAGGCCGTGCTCCTTGCCCCAGAACCGAACATCGACCGGGGAATGCCCGACCGGATCGGATTCACGATTCCTCATGATGGCAACAGATAGCAGAGCCCACTGACAACGCGTCCCCACCTGCGAGAAGACCGGAACGCATCGAGCACGGTCCCGTAAACTCCCGATCGTGGCAACTCAGCTGACGTCCCGACTCGACCTGCGGGGCCGAGCCCTGGCACATTCGGTAAAGCACTTGCAAAGCCTCTGAAGACTCCCAGGTCAGAAAGG # Right flank : AGGTACACCTGGGGTCGGCGTCCCGCTGCCGTGCTCACCGAGCCTATGAACGCTATTGCAGCTTGACAGCAGCTCCTGGCTGAACTGGCAGGCATAAGGATTTGAAAGCCCAGCTCGTACTTCAGAGTAAAAGGTCGGTCAAGTTGCCGCTCCTACCTTGAAGTTGGTTCGTGTTCGCACCTTGCAGTAGGAACGAATCCGGACGGTAGGTCTGGAGTCCGCCCAGATTCCGGGTGGTTCTATCTGCGCCGTTCGCGAGGTGATGTGACCGTGGTGATTGCAAGGGCATACACGCATGCCAGATGGCGGGCTGCCGAAGCGGCCTTCGGTGCCACGGCGGTGTTGCTGGCCGCGAGCTGCACGGCATCCGATACGCCGAGTGTGGCGCCTTCACAGAGTGGTGGGACGCCTGACGCCGTCGCGAGCCGCCCGTCCTCCGCGAGGCCGTCGTCCGCGTCCCCGGCGGAGGTGGCCCGGAAGCGTGCCAAGGCGGCGTATGC # Questionable array : NO Score: 5.54 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4025408-4025987 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP023440.1 Streptomyces glomeroaurantiacus strain JCM 4677 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 4025408 30 96.7 31 .............................G ACGTCGGGCGCCTCAAAACCAGGAAGGCGGC 4025469 30 96.7 31 .............................T AGCCGGAGGTCCTCATGGCGCTGCTCACCCT 4025530 30 100.0 31 .............................. TGAGCGGCTGTTGCGGTCGGCGCAGGATGGT 4025591 30 96.7 31 .............................A ACTGCCAGATCTTGTCGGCCGCCGCCTTGAT 4025652 30 100.0 31 .............................. GGGTCCACCTCGGCACCATCCGAGACGGCAC 4025713 30 96.7 32 .............................G CCATGGCCGCAGTCTGCCCGACCGCAGGCCGT 4025775 30 100.0 31 .............................. AGTCCTCTGACCACACCCACACGACAAGAGG 4025836 30 93.3 31 .C...........................G CGCCCGTCGAGGCAATCATGGCGCTGCGGCT 4025897 30 90.0 31 ...TG................A........ CGAGCCCGTCACCGGCGGCCGCGGTGCGGCA 4025958 30 86.7 0 .C.......A..................CA | ========== ====== ====== ====== ============================== ================================ ================== 10 30 95.7 31 GTCCTCTCCGCGCGAGCGGAGGTGAACCGC # Left flank : TCACCGACATCCAGGACCTCCTCGCCCCAGGCTCAGGCCAGGACATCCCCGACCCGGAGGAACAACTGGTCGACCTCTGGGACCCAGTGACCGGCCCCGTCCCCGCCGGCACCAACCACGCCCCCAACACCTGACCACAGACACCGCGCAAAGGGGACGACCACACCGCCATGGCCTCCATGATCACCATCTCCGCCACAGCAGTACCAGACCACCTCCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACACCGGAGCTGTACGTGGGCACGGTCTCAGCCCGCGTCCGCGACGAACTCTGGGACTCTGTAGCCGCCTGCACAGGCGACGGCATGTCCGTCCTCATCCGCCCCAGCGACAACGAACAAGGCTTCGAACTCCGCACAGCCGGAACCCGCCGACGCCACCCCATCGACTTCGACGGCATGGCCTTGATCGCATTCCAAGCAAAAGGCAAAGAAACAGCAAACTCACTCTAACGTCGCAGCTCAGGGAGT # Right flank : ATCCTCCACTGGCTCAATGACTGCGGGCTGCAGTTCTCTACTGGCTAGGGCGGACTTCAGCGGGCACTGACACAGATCTTAGACAGCGGTAGCGGAGCGTCACTGGAGCCGAATCATCTTGCGGAGGAGTCCGAATCCCGCCCGTCCGTAGAGTTGTCGCTCGATAGCCCGGCTCAACTTTCAGCTGGCGTGTGTTTAAGGGCTGCGGCGGACTTCGTCCACGGACGTGGAGGAGCCGTACGGGTGATGCCCGAGACCCCGCAGAGGCTGCTTGGGGACTGGGAGACTGAGACCATGCAGTTCCTAGGCTGGTCCCGTGCCACGGAGCCGAAAGTGCCATTCGCCCCGCAGGCTCGTCCCAGCCGCGTACCGCGCGGATACGGCGGAAACGCAGGGATGGCGCCAGACATCAGCATGCTGGCCGGCACGCCCCTGTGGCGCACCTCTTTGCACAGCTGACCGCCGAACGAGTGATATCGCTCATGGGCCGCTCGCGGCAC # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAACCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //