Array 1 67042-62670 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOFJ01000001.1 Spirillospora albida strain NRRL B-3350 contig1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 67041 30 93.3 31 ............................AT GACCCAGCGTCGGATCCGCCGCCGACGGTTC 66980 30 96.7 31 .............................A GGTCGAGGCGCCGCCGTTCCTCCGGGGTCGC 66919 30 96.7 31 .............................C TGGATGCGCTGGTCTCCGGATGAGACGTTGT 66858 30 96.7 31 .............................C CCGGCGTCGCGGAACTTCGGGGCCAGATCCG 66797 30 100.0 31 .............................. CTTCGCGGCTGTTGCGGGCGAGGCCGGTCCG 66736 30 96.7 31 .............................T TTCGATCATGACGATCGACCCCCACGACCCC 66675 30 100.0 31 .............................. CGGCGGCTGGGACGACCACATGCTCGCCGAG 66614 30 96.7 31 .............................T TCTCGGCGGGCTGTCCCGCACCAGGCCGGCG 66553 30 100.0 31 .............................. AGTACGGGCTCTGCGCCGCATGCACCAACTC 66492 30 96.7 31 .............................C CGCCCCGGCCTTGCCGCCGGGCGACCCCGAA 66431 30 100.0 31 .............................. CGACGCCGTCCTGACCGAGCTCGGCCGCGCG 66370 30 96.7 31 .............................T CTCGCCGCCCTGGAGCGCGCCCTGGAATGGG 66309 30 96.7 31 .............................C GGCCGGTCCTGTCGGTCCATCCCTCCCGGAG 66248 30 100.0 31 .............................. GTTCAGCGTCGATTACGACCTCACCCGGCCG 66187 30 96.7 31 .............................C CGGTCGTGGGGGTCGAGTCGCTCCACACGCT 66126 30 96.7 31 .............................A ACACCGCCACGCTGGCCGACGACCCGCACCT 66065 30 100.0 31 .............................. CGGCCGTGATCTGCCGGTCGGCCCAGGCCGA 66004 30 96.7 31 .............................A GCCACGCCAGGTGGAGGGCGGTCGGGCACGC 65943 30 96.7 31 .............................T CGGCGTCGCTCGGCAGGTCCGACAGCGGCCA 65882 30 96.7 31 .............................C CGTTCCTTGACGCGGCATGGGAGACCCTCAC 65821 30 96.7 31 .............................T CGCGCAGCTGCGGCAGGTCGGTGACCAGCGG 65760 30 96.7 31 .............................T GCCGGGACCGGCCGCCCAGGCGGGTCCGGAA 65699 30 100.0 31 .............................. ACCTGGTAGACGCGGCCACCGACGACGCTGC 65638 30 96.7 31 .............................A GTTGCGCGCGTACGCCCGCCAGGTCGTCGAG 65577 30 96.7 31 .............................A GGACTTTGCCGTCGGCGTCGGTGTATTCGTA 65516 30 100.0 31 .............................. AGGACGTCGAGATCGAGGTCGGCGTCGACCT 65455 30 96.7 31 .............................C GGCGAACGCCGGTCTTAACCTGCATGCATGA 65394 30 100.0 31 .............................. CCCGCCGCAAGGCCAGCCTGATCGTGGGCAT 65333 30 96.7 31 .............................T GCCTCAACGGGGTCCCGTCGTGAACGCACTC 65272 30 96.7 31 .............................C TGGGCGAGGTCGCGATGACGATCGTCGGCCC 65211 30 96.7 31 .............................C GGTTCGCGACGACACCGATGATGATCGACCA 65150 30 96.7 31 .............................T TGATGTCCGGCGTCGCCGTCGTCGAGGAGTA 65089 30 96.7 31 .............................A ACGGCGCGTACTCCCTTGTCGAGGGCCCTCG 65028 30 96.7 31 .............................T GGACGTCGGCGAGCTCCTCGTCGTCCTTCTG 64967 30 96.7 31 .............................C AACTCGATTTCAACGGCCGGACGTGCCAGAC 64906 30 96.7 31 .............................C TTGCAGGGTGACCCTGTAAGGTCTGAGGTGT 64845 30 100.0 43 .............................. CCCTGCGGAGGGCGTGCGCCTCGGCGGCCTTGAGCGCCATCTC 64772 30 100.0 31 .............................. AGAAGCTGCGCGCCGCCCGAGACGAGGAGAC 64711 30 96.7 31 .............................T CTGCGACCTGCTCGGCGACGACCCCGACGAC 64650 28 90.0 31 ................--...........C AGAACTGCCCCACCCTGGCCGGCCGCCGTCA 64591 30 96.7 31 .............................T ACATCCCCGGCGTGAGCGTGGAGCACTTCAC 64530 30 100.0 31 .............................. CGCGGCGGAGGGCGTGCGCCTCGGCGGCCTT 64469 30 93.3 31 ............................TC CGACAGCGGGTCAGTGAGGTGCGCGCCCCGG 64408 30 100.0 31 .............................. CCGGGTTCCGGGTGCCGGTCGCGCTGACCCG 64347 30 96.7 31 .............................T TCACGTTCCGGCCCGCGGGCAACAGCGTCGT 64286 30 96.7 31 .............................T CCGCCGATTTCCGCGAAACGTTCCCTGTTTT 64225 30 100.0 31 .............................. CGGTCGTGCTGGCCCGGCTGAACGCGCTGGG 64164 30 96.7 31 .............................C GGACGCTCATGCTCATCGCCCAGCCGCACCA 64103 30 100.0 31 .............................. GCAGAGGCATGAGGGGTCCCCGATCGGTTAG 64042 30 96.7 31 .............................A GGCACGTCACGTGCGCCTCGGTGAGGTCGAA 63981 30 96.7 31 .............................T CAAATTCCAGCGAACCGAGGTCGAGGTCGAT 63920 30 96.7 31 .............................A GCGTCCGCGACCTCGTCCTCACCCACCCCGA 63859 30 100.0 31 .............................. CCCGCCGGAAGGCGTCCCTGATCGTGGGCAT 63798 30 96.7 31 .............................C CGGGCGACCCCGCGGTGAACTTCAGCGGGAA 63737 30 96.7 31 .............................T TCAACATCACCTCCGAGCCGGCCGAGAACGT 63676 30 96.7 31 .............................C GCACGCCGAGCCCGAGCCGCGCGAGGCCATC 63615 30 96.7 31 .............................A GGACCGTGAGCAGCGCCACCCACGCGACCCC 63554 30 100.0 31 .............................. CCGCCCTGAACCAGCTGGGGTTGACGTACGG 63493 30 96.7 31 .............................A AGATGCTCGCCAGGTTCACCGGCGCCATGTG 63432 30 96.7 31 .............................C TCACCGCCGCCCTGCGTGAACTAGACCGACT 63371 30 96.7 31 .............................C GACCACGAATCCACGAAGAGGAAGGAAGTCG 63310 30 96.7 31 .............................A GCAACGCGAGACCGGCGCCCGCCGGGTGATC 63249 30 100.0 31 .............................. CCAGAGCTAAGGCCGAGGACTGCGCGAAGGC 63188 30 96.7 31 .............................A GCGAGACGGGAGACCCCTCATGACCGTCACC 63127 30 100.0 31 .............................. TGCCGTCCATGACGGCGTCGCGGGTGGCGCT 63066 30 100.0 31 .............................. TGCCGTCCATGACGGCGTCGCGGGTGGCGCT 63005 30 96.7 31 .............................T CCCACTTGTGGGCCGCACCCTCACATTGCGG 62944 30 100.0 31 .............................. CCTACGGCATCCCCCCGGACCGGCTGATCAA 62883 30 96.7 31 .............................A GCACCTTCAGGCCGCGCCCGCCCGTGCCGTC 62822 30 96.7 31 .............................A GGACAATACGGCGGGGGCGAGTCAATGAACG 62761 30 96.7 31 .............................C ACCCCCGGACGGCCGGATGCGCGACCGGCAT 62700 30 90.0 0 C...........T.......C......... | G [62673] ========== ====== ====== ====== ============================== =========================================== ================== 72 30 97.4 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Left flank : AACCATCTGCGACTGACGCGGCAGCCAGCGATCCCACAGCAGAGCCGCAATCGCGCCGCTATCGGCAAGGTGCCGCCACAACGGCAACCATCCATCGCTTTTGCGATCGTGCTTGGCCCACACCGTCCGGGCCTCCGGCGATAACCGCTCTCGCAGCCACGTGCCCCGCGCCTCCCCGATGAGCATGCAACTGATTTAGCACGCTCCGCGAGCACGCCGCCCGCGGAACCGAAAAGATCCAGAGAGGGCTACGCAGTCGGCCGACGACCCTGAGTAACGGCCGCACCCCGCCTGACCTGGCGGGACTATCGCCTGCCGCCAATGCAAGCCTGATCAGTTGTCCACAAGGGGTCACGCCGAGAAGCCTGCTTGCCCTGCCGCACGAGCACCGCCAGCCTTGGACGACGCAGCCGTCCACAGACTGGCAGTCCAAAATGTCCGACTCTGCAAAAGTGCTTTCAAACCGCACTCAGCGCCGATAACGTCCCAGGTCAGCGAGA # Right flank : CATGGACAGGTGATGATCTTGGTGTGCGAGTGTTCCTCGCGCACGCCAGTGCTAATCAATTCGAAAGGTCGAATGCACACAATCAAGACTACCAAGACATAATCGATGGGCGATTGACGGCAGTTGGACTGATGTGCAATACAGCGGAGTGGCCTGCTGTAGGCCACTCCGCTCATGAACGACGGTCGAATCCGGCCGCCAGCCCCGCGTGCGCGGGGAGCAGTTTTAAAATGACCTAAGGCTAGCCCCTACCACGGGCTCATCCCTGCGTGCGCGGGGAGCAAGGCAGTTGCGATCGTAGGCTACCGCCCCAGTTGACGCTTCACCCTAGGCTGCTCACGGGCCTGGACCCCAGGCTGATTTGGCTTGCTCAACGTCTCAGGGAGCAAGAAGCGAGCGACCCCAAGCAAGAGCTCCTGCACCCATCGCCGCGCCCACTAGCGCAGAGTGAGGAAGGTCTGCCGTGGACAGGAAGGTCAGCACCTGAGATGCGACGCCCA # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 76533-80775 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOFJ01000001.1 Spirillospora albida strain NRRL B-3350 contig1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 76533 30 96.7 31 .............................C CCGCAGCGCGCAGCGGCAGGACGTGCCCGAG 76594 30 96.7 31 .............................T TCGTCTGGACCATGAGCTGCCGCATGGTGGC 76655 30 96.7 31 .............................A CCGGCTTCGTGCTGCGCTGGTACGGGCACGT 76716 30 100.0 31 .............................. ACGCGACGATCACGGTCTGAGGGGCGACACG 76777 30 96.7 31 .............................C GCAGCGCAGGAGCGCGCAAGGGCAACCGCAG 76838 30 100.0 31 .............................. GGCAGGCGGTCGCGTCGGTCACGTGGGCGGA 76899 30 100.0 31 .............................. CATCATCGAGGCCCTGGAGATGTCTCTGGAG 76960 30 96.7 31 .............................T CCACCGGCTCGTTCTGGGCGGTCGAGGGCTT 77021 30 96.7 31 .............................A GGGACACGTCCGGGGGCGCGTCGACGAGCCA 77082 30 96.7 31 ............................T. CTGGCGCGGATGGCGTCGTCGGTGCCGGGCA 77143 30 100.0 31 .............................. GCACCTGCATCGAAACCACCAACCACGACGG 77204 30 100.0 31 .............................. ACGGGATCGGCCCGGAGGTGTCGCCCCGGGT 77265 30 96.7 31 .............................A CCGCGGTCTACCTGAAGGCCCTGCGCGAGCA 77326 30 100.0 31 .............................. GCGAGCGCGTCATCCCGGACGTCCGCTACAG 77387 30 96.7 31 .............................T CCACCGGCTCGTTCTGGGCGGTCGAGGGCTT 77448 30 100.0 31 .............................. GTCCGTGGGGTACGGAGCGTGCCGCCTGGAC 77509 30 100.0 31 .............................. CGGCGTCGGTGTAGTGCGCGTTGAGGGTGGT 77570 30 96.7 32 .............................C GCCACACGCACCAGCTCAGCGCGAACCAGTCC 77632 30 96.7 31 .............................T GAGAGGAAGCGGCGATGCGACGGTGGAGGGA 77693 30 93.3 31 ............................GC CTTCGACATCATGACGCGCGGCGCGCAGCTC 77754 30 96.7 31 .............................C ATCTCGAATGCCTGGCGCGGCATGAAGGTGA 77815 30 100.0 31 .............................. GTGAGGGCGTCGTAGGCGGTGCTGCGGGGCA 77876 30 100.0 31 .............................. CGGGCTACACCGTCGCCGATCAACGCAACCT 77937 30 96.7 31 .............................C GAGCTGATCCAGTACTGAGAGCGGTTGCTGA 77998 30 100.0 31 .............................. GCTAAGTCGCCGTCGGGTGATAGCCGGTCTT 78059 30 96.7 31 .............................A ACCTCGCGGGCCGCAAGTGCGGCGGCTCCGG 78120 30 96.7 31 .............................A GGACCGGTCCTAACTTGTGTCTGGACCAGGT 78181 30 100.0 31 .............................. ATCGGGCCGCCGGGTACACCGTCCGGAGTCT 78242 30 96.7 31 .............................T GCAAGTATCTCGGCTCGATATCGCCACGTGG 78303 30 96.7 31 .............................A CCCGGCCCGGCGGCGGCCGGGCCTCGTCCAA 78364 30 96.7 31 .............................C AGGGGTTCCCGTCGATGGTGACGGTGCGGAC 78425 30 96.7 31 .............................T ACGTCTGGCCGCTGCACGTGGTCCTGAAAGA 78486 30 96.7 31 .............................C GGACGAATGCCTGCCACTCGCCCTTCTGCCG 78547 30 96.7 31 .............................A GATCCGCCTCGCCGAGGACTACCAGTTCGAG 78608 30 96.7 31 .............................T TGTGGACGGTCAGGCGGCGCGCTCGACCTCC 78669 30 100.0 31 .............................. CCTCGGGCTGGTGGTCGCGGAGCCAGACGAG 78730 30 96.7 31 .............................A GGCTCAGGCGCCCACCGAGACCCGACTTGTC 78791 30 100.0 31 .............................. AGCGAGGAAACCGCGTTCCTCCGCGGTGATC 78852 30 96.7 31 .............................A TCGACCCTGACACGTGGTCGGCGTACGTCAG 78913 30 96.7 31 .............................C CGTTCGCGATCGTGCCCCAGGACTGGCCGTA 78974 30 100.0 31 .............................. TAATACATGCCGATCAAACGATTCAGCTCAC 79035 30 100.0 31 .............................. GACGTCTGGACGTCCAGACGTCCAATGACCT 79096 30 96.7 31 .............................A AGGAGCACATGGATGAGTACCTCGACCGCTA 79157 30 96.7 31 .............................C GCGGCCGAGGGCGGTGGCAGGTGCGGATGGA 79218 30 96.7 31 .............................A GGACCGTGAGCAGCGCCACCCACGCGACCCC 79279 30 100.0 31 .............................. ATGACAAAGGACGATGCGATTCCCGAGCCCG 79340 30 96.7 31 .............................A GCCCATCCTGGCCGTCCCGGGCCGCCGCCTT 79401 30 96.7 31 .............................T GTTCACGGCCCCGCACCGGTCCGCCGGCGCG 79462 30 96.7 31 ............................A. CAGCTCCGTCCGGGCGTGGGTGGTGGACGGC 79523 30 96.7 31 .............................A TGATCAGGAGCCGGTACGGGCCGGACGCTCC 79584 30 100.0 31 .............................. GGGCCGTGCCCGGATGCCCACCCCGGAAGAG 79645 30 100.0 31 .............................. GGACGTGGCCGAACGGGGAGCCCAAGTCCGT 79706 30 93.3 32 .....T.......................A TGGACGCGCGCCGTCGCGGACTCCGCGGCCCC 79768 30 96.7 31 .............................T ACGGCGGGGCCGGCCATGCGGCTTTCATGCC 79829 30 100.0 31 .............................. CCTGGTCGGGCCTGTGGGGAAGTGAGTTCAG 79890 30 100.0 31 .............................. CCAACAAACCCATGGGGCTGCGCGCGCACTC 79951 30 96.7 32 ............................A. GGCGAGCCCTACCAGGCGCAGGTCGACACCGG 80013 30 96.7 31 .............................T CGGCGTCCGCATCGTCGGCGAGTTCGTCGAC 80074 30 96.7 31 .............................T TGTCAGCCATCGCCCGCCCCCTCAGATCCGG 80135 30 96.7 31 .............................T TGTCAGCCATCGCCCGCCCCCTCAGATCCGG 80196 30 100.0 31 .............................. CCTCCATGATCTCTGGCCGGGTCCGGACGTA 80257 30 96.7 31 .............................T TCGAGGACGCCCGCCGCTGTCGCGTGGCAGT 80318 30 96.7 31 .............................A CGTGCGTCGCGTCCCACCGGCCGATCGGCCG 80379 30 96.7 31 .............................T CGCTCTCCCAGAGCCACCGGACGCCGCGCTC 80440 30 96.7 31 .............................T ACCGCTCGCTGCCGCGCGTCTCCCCGGGCGC 80501 30 100.0 31 .............................. TCGTCCAGACCCAGCGGATCGCCGTGCCGAC 80562 30 96.7 31 .............................A GCGCTGAGGAAGCGCGACGTTCCCGGATCGT 80623 30 93.3 31 ........................A....T TGCCGAGCACGAATGCCGAGTGGGCACAGGC 80684 30 96.7 31 ............................G. ACCTGTCCCGCCCTCAACTGTGGGCGATCAC 80745 30 90.0 0 .....T..........T........G.... | G [80772] ========== ====== ====== ====== ============================== ================================ ================== 70 30 97.5 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Left flank : TCTGCAAAGCGACCGCGGCATCAATATCGAATCCGGACGCAACTACGCCGAAGACGTGCACTGGTGACCATCATCATCCTCACCAACTGCCCCGCCGGCCTGCGCGGCTTCCTCACCCGCTGGCTGCTGGAAATCGCCCCCGGCGTCTTCATCGGGAACCCGTCCACCCGAGTCCGGCAAGCCCTCTGGGACGAAGTCCACCAATACGCCGACACCGGCCGGGCCCTGCTCACCTACACCACCAACACCGAGCAGGGCTTCACGTTCGAGACGCGCGACCACAAATGGCACCCCATCGACCACGACGGCCTCACCCTCATCCGCCGGCCCAAGACTCAACCCACCATCTCCGCGAATCCCCCACCCTCCGGCTGGAGCAAGGCCTCAAAACGCCGCCGCTACGGCAACCGGTGAGTCCCACCCCTCTGCCCGGTATGTCCAACTCTCATAAAGTGCTTCCAAATGACTCTCCCGCCGGATAAACCCGCAGGTCAGCCAGA # Right flank : GTGGCGGCCGTGGGGCGCCACCAGCGGCGCGATGCCAGGGCGGCGAGTCCGGCGCCGGCGGTGTTGAGCAGGACGTCGTCCACGGACGACACCCGGTCCAGCCTCAGGACGTACTGCGCGGTCTCGACCAGGACCGAGCAGCCCGCCGCGAGCACCAGAATCCGCGGTGTCGACGCCAGCACCGCGAACCGCAGCGGGGCGAAGAACCCCAAAGCCGCGAACACCAGCAGGTTGCCGACAATCTGGGGCATGTTCATCGAGAGCAGGTCCTGCAGCGGCACCAGCTTGGTGACGGCTCCACCCTCGTCGCCCGGGAGCACGATCATCCAGACCCACGGCACCGTCCCGTAGACGATGCCGACCTCGGCCAGCGACATGCGCCACGCCCGCGCCGCGTCGGCGGCGCTCCGGCGGCGCGACAGAACCCACACCGCCAGCGCGGCGAACGGCAGTGCGGCCACCGTGATGAGCACCACGCCGTTGATCGTGCCCACCCAGAC # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //