Array 1 23481-22059 **** Predicted by CRISPRDetect 2.4 *** >NZ_UWPC01000011.1 Vaginisenegalia massiliensis strain Marseille-P5643, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23480 36 100.0 30 .................................... TTTGAGTTGATACCTCCGCGTTGATTTGGC 23414 36 100.0 30 .................................... GGGAATAAAAGTAATCAATTTCCCCATCTT 23348 36 100.0 30 .................................... TTTAAAATGCAAAGGAGATTCAATGGAGCC 23282 36 100.0 30 .................................... ATAAATCATTAATGCTAATATCAAGTGCAT 23216 36 100.0 30 .................................... GTTTTGGGAATTGATGCTGATAAAATTAGA 23150 36 100.0 30 .................................... GTAACGATTTTTATTACAATTTAAATCTTT 23084 36 100.0 30 .................................... CGCAATGAAACAAGCTAAGAAAACGATGTT 23018 36 100.0 30 .................................... CAAGGGTTGAAATAGAAAAGAGTCAAAGAA 22952 36 100.0 30 .................................... AACGTGATTTAATGTTCTTAAATGAGAAAG 22886 36 100.0 30 .................................... AACTATCAACCCATTTTCTAATAACTATCC 22820 36 100.0 30 .................................... TAAGTCCATGAACTTTAAAACATTGGCTTC 22754 36 100.0 30 .................................... AACAACTATGAAAAATGAAAATGGTTCAAA 22688 36 100.0 30 .................................... AAGTGGAAACATAGATATGGCAATCGAGTT 22622 36 100.0 30 .................................... AGGAACAAGCGAGATTGCAAGCTGAAATAG 22556 36 100.0 30 .................................... GATTCATTAGCTATTACCTCGTTAACTCCG 22490 36 100.0 30 .................................... GAGAAGCCCTAACCGAGTTAACCGAGCTGT 22424 36 100.0 30 .................................... AATTTTTTGTTTGCTTAACGTGTACTTTGT 22358 36 100.0 30 .................................... CGACAGATTGCTTGCAATCGTTTTGAATCC 22292 36 100.0 30 .................................... CCTATATTTATGTGTATATCTCTTGAACCT 22226 36 100.0 30 .................................... TTAGGCAATCCTAAAACCTCACAAGGGTCT 22160 36 100.0 30 .................................... TTATCTTATCTGTACCGTCACGTGACGTCA 22094 36 97.2 0 ..................................G. | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.9 30 GTTTTTGCACTCTCTATAATTTCCTATCAGTAAAAC # Left flank : GAAATAACGGGTAAGCCCATCTGGCTTGTATTAAATCAACCTGAAACCTTTTTAAGTGCAGAATTTATCGAGCAATTTATTCAAAGAATTTCAATATTGTCTCAAGAGACTAGATTAGTGCATCTGATTGTAATCACTCACCATGTAATTTGGGAAGTAAATCAAGGTTATTTACCCAGAACAGTGGTCTGTTATGATGATATTTTGCAGATGCCTATATTAGGAGATTATAGGACTAGTTTACAGAACCATTATCCAGATGAATTTCGTTATTCTGATGAAAAATTAATTAAAGCCACATTTCGACTAATTCATTTAATTGGCTTGCCGATTAAACAGGCGCTTCTCATAAGCCCTAAGGATATGGTATTATTTGTAGTGATGAAAGAATTATTCGAGGATTATTCTGATTTTGAGACGTCAATTGAAGAATTATCTGAGATTGAATATAATTTTTTGATCAAAAAGGGGATTTTGGGTTAGAAAAACCGAAATTTGAG # Right flank : TATGTAGGCGATTTGTTTAATTAAATTGAAGAAATGGATGAATTATTTAGTTGTACAAATTTTAATTAATTTACAATTTACTTGGTGTACGCAATCCTGTACATCATAATATATGTAGAGGTGATGAAAATGGAAGAAATTGTAAACCCTACAAAATTTAGGCAAAACTTATTTGACGTACTAAAGCACGTAAACGACTCTCACAAAGAGGTCAAAATTATTGGCAGTAATCCTAATACAAACGCAGTGCTTATTTCACTAGATGATTGGAACGCAATTCAAGAAACGCTTTATCTTGAGCGAACAGGAACGATGAGTTTTGTTCGTGAGCGTGAGAACGATAATAGTGAGCTGATTGAAATTGACAATATTGACAATTTAGATTGGAATAACTTGGAGGAAGAATTATAAAGTTAAATTAAAAAGCAAGTTAAGAAAGACTTGATGAGACTTAAGTCTAGTCATGTGTAGAAATTTATAAGACTTTAGAAAATAATCCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGCACTCTCTATAATTTCCTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //