Array 1 1145089-1139126 **** Predicted by CRISPRDetect 2.4 *** >NC_017034.1 Methanocella conradii HZ254, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1145088 37 100.0 36 ..................................... ATGACGCCTAGTATCGTGTTCGCAGCGTTCCTCACC 1145015 37 100.0 38 ..................................... TGAGCTTCGTACTATACCTGGACAGGGATTCCTCCCTG 1144940 37 100.0 36 ..................................... GTCATATTCTCTGTCATTTGCATATTTTCACCAACC 1144867 37 100.0 37 ..................................... GACGGGGGAGACCATGGATGGAGAACCTGTCATGCGG 1144793 37 100.0 35 ..................................... TCCTGGGTACGCCCCTGGGCGTCCCAGATGACCCC 1144721 37 100.0 35 ..................................... ACGATATGCCCATCTTGTATCTCGTCGACCAGATG 1144649 37 100.0 36 ..................................... AATGCCCATGAAATACGTTCTTTCGCCGCTTCGAGG 1144576 37 100.0 36 ..................................... AATTCCCATGAAATACGTTCTTTCGCCGCTTCGAGG 1144503 37 100.0 36 ..................................... CCGTCCACGTCGAAGGTGATGTACCCGTTGTGGGGC 1144430 37 100.0 36 ..................................... TCCTAACCGTGTTGTAGTCGTCCGCCGTGTAGGGGT 1144357 37 100.0 37 ..................................... TGTCATCGTAGCCGATTATCATGAGGGCGTGGCCCCC 1144283 37 100.0 37 ..................................... TCTTCTCCTGCTTCTGGGCCAGGTCGTTCAACTCCCT 1144209 37 100.0 37 ..................................... TAACATGAGCAACACAGCCTATGAGCCGTTGAAGGGC 1144135 37 100.0 38 ..................................... TGGAGACCATTGTCAGTCATATCCTCGCCTCCTCGTTG 1144060 37 100.0 36 ..................................... AGCTCCGTGTGGGCTGATTCGACGCCCGTTTCGAGG 1143987 37 100.0 38 ..................................... CTTGCAGCCGCCACCCCAGTGGCGGTGTGTACAGCTAC 1143912 37 100.0 36 ..................................... GCTACCATCCATGTACACGTCATAGTAGTTCGTGCC 1143839 37 100.0 36 ..................................... TTATCAACAAGCAGTTTTTTTATGCGCTCACAGAGG 1143766 37 100.0 35 ..................................... CGAATTCGCCGCCCGGCGTCGAGTTCGTACCAGTG 1143694 37 100.0 36 ..................................... ACTGGCCGGACAACCCATTAGACCACGAGCCGACAA 1143621 37 100.0 36 ..................................... GCGAACCTGGCGTTCCAGGGAAGCGTCGACGGCACG 1143548 37 100.0 35 ..................................... GCGTATATGTGGGAGTATAAGTGGGCGTTGAACCC 1143476 37 100.0 35 ..................................... GCGTATATGTGGGAGTATAAGTGGGCGTTGAACCC 1143404 37 100.0 35 ..................................... GTTAGCACGTCAAACCCGGGCACCCCCGTGAACCA 1143332 37 100.0 35 ..................................... GTTAGCACGTCAAGCCCGGGCACCCCCGTGAACCA 1143260 37 100.0 35 ..................................... TCCTCGTCTTGTGGTGAGGGCACCCCGTCTTCCTC 1143188 37 100.0 38 ..................................... AGTTGTCGGCGTTGCCCGGGTGGGGCGGCATGCACAGC 1143113 37 100.0 35 ..................................... ATGTATGGCTGGGCTGGTACTCCGCGCCTCCCAAT 1143041 37 100.0 37 ..................................... ATTGTTCCGGTGGATTACCAGTAATGGTGTGAGGCCC 1142967 37 100.0 37 ..................................... ATTGTTCCGGTGGATTACTAGTAATGGTGTGAGGCCC 1142893 37 100.0 36 ..................................... TGCCACGTGAGCTCCGAGGCCTCGTTTATATAAGCA 1142820 37 100.0 37 ..................................... TTTATTTTTTCTATCATTGTTTCCGCGCAGTATTTTG 1142746 37 100.0 37 ..................................... AGGGTTACGCGCCCCGCCACGCCATCATACAGGTGAG 1142672 37 100.0 36 ..................................... ACGTTGTGGGGGATACTAGGATACTACCACGAACTA 1142599 37 100.0 36 ..................................... GTACTAACCTTTTTTATGTATTGGGCATACTTTTGT 1142526 37 100.0 36 ..................................... TTTTCGCCATATTATGACCATATCCTATTCTTCTAT 1142453 37 100.0 37 ..................................... ATATAAATTACTACGCCATTGAAAGCATCCCCAATAC 1142379 37 100.0 37 ..................................... TTTTGATAATATATAAATGGTGGATGGTCACCGTGTT 1142305 37 100.0 36 ..................................... CTCCTTTTCGCCTCACGTAAAGGCGGTTTTAATTGT 1142232 37 100.0 37 ..................................... TAATGTCAGCGGGGTCTTGGCTAAAATATACTTTGAC 1142158 37 100.0 36 ..................................... ACAACATGCTTAACAATAGTGTAACCATACTTCTTA 1142085 37 100.0 36 ..................................... TACACGAGCACCCTAAGGCGAGAGCCTTGGAACAGC 1142012 37 100.0 36 ..................................... CCGGTCTGACGGGCATGTATAGCCTATCCTGACGGT 1141939 37 100.0 37 ..................................... GTGAGGGTTGCGTATCCACCTGGCACGAGGACCATCC 1141865 37 100.0 37 ..................................... TCGTGACCACAACCCCGAAGCCGAACAAGATAACAAA 1141791 37 100.0 35 ..................................... ACCACCCACGTCTCGCCTACAACACTACTACCACA 1141719 37 100.0 36 ..................................... ACGGGCGTCCCAGTAGCCGACGCGCTCGCCAGTCTG 1141646 37 100.0 37 ..................................... ATTCGGATCGTGCCTTCGCCGCTAGACGTCATTACCA 1141572 37 100.0 36 ..................................... ACCCATTAGGCGTCATAACGTATAGGCTCCCCACTG 1141499 37 100.0 36 ..................................... CCCGGTAGACGCGGTACCCGTCAACCCTCCAGGGCA 1141426 37 100.0 35 ..................................... TTTAGTGCGCGGCTCATCTCGATTTGGACGCGTAT 1141354 37 100.0 36 ..................................... TTGTTAGCAAATGTTAAATAATTGCTAACAATAGGG 1141281 37 100.0 37 ..................................... GATTTAAACAGTACATGGAACAGAGGATGGGCGCCAC 1141207 37 100.0 36 ..................................... AAAGTTGCCATATTTATATTCCCTCCTTGTTTGGGT 1141134 37 100.0 35 ..................................... AATCGTGAATAAAACCGGATATATGAATCTGCAAA 1141062 37 100.0 33 ..................................... ACGATATCGGTAAAATACTTGAGGGCATAACCG 1140992 37 100.0 38 ..................................... TTTAACACCATCATTAGACTCCATTCTATCTGGCTGTT 1140917 37 100.0 37 ..................................... TGCCTTTGGTGGTGGATTTGGATGCCGTTGATTAGGT 1140843 37 100.0 36 ..................................... TTATAGGTTTTTACTAACTCGTCAAAAGTTAGGATG 1140770 37 100.0 36 ..................................... TTCAACATTTCAACACTTGTGGCGGCGTTGTCCAAA 1140697 37 100.0 36 ..................................... ACGTAAGGCGATTTTTAGAGAAGTTAGAAAGTCCTT 1140624 37 100.0 35 ..................................... TCTTTGCTACCCGTCAATCTGGCTGGCGTGTTCGG 1140552 37 100.0 36 ..................................... TATTTATCCCTCACTATAAATATAAACAGGATGGTG 1140479 37 100.0 36 ..................................... ACGCAGCCCCATTGGGGAGGATGGTCGAATATTGTA 1140406 37 100.0 35 ..................................... GTTCTTGGGTTTCTTGTTCTATTTTTTTATTATTT 1140334 37 100.0 38 ..................................... CGCATCAACATGCGCCTGATGATGCCCCTGATACTGTT 1140259 37 100.0 37 ..................................... TGGGTTTTTGTTTGTTAGAACCAAATTTATTGGCTAT 1140185 37 100.0 36 ..................................... TTATAAGTAGCATGGCGGCCCTGTCCGGGCATATCG 1140112 37 100.0 36 ..................................... TTATAAGTAGCATGGCGGCCCTGTCCGGGCCTATCG 1140039 37 100.0 38 ..................................... GACCAATGTATTGTTGACCATATCATGTTCTTGCCTTC 1139964 37 100.0 36 ..................................... CAAAAAAAACTTGAGGAAATAAGAGTCTATTTGAAT 1139891 37 100.0 36 ..................................... CTGGCCAGGGAATTTTCCATGGAGTTTTTTTATAAC 1139818 37 100.0 37 ..................................... TTCTCACCCTTCCCACTACCCCCCGTATCATCCTTCC 1139744 37 100.0 36 ..................................... ACACGTCTTGGAATTTGTGGTCGGGTATAAGAATGA 1139671 37 100.0 34 ..................................... CATATCCTTATCACTCATAATAATCCCAAATTGA 1139600 37 100.0 35 ..................................... CTGACCGGTTCTACGTGTTCTGCGAGGAGGTAGTA 1139528 37 100.0 38 ..................................... ACCTCTGGGAGGATGTTCTTGCTCACGTTTTCCAGCCG 1139453 37 100.0 36 ..................................... CAGCTCAACCCACTTGGGGTCTACGAGCGGGTGAGA 1139380 37 100.0 38 ..................................... AGGGTATACCTGCCCTCCACTACCAGCTCGGCCTGCCA 1139305 37 100.0 35 ..................................... GCGGGGACACCACATTGGGCTTGCTGGTCTGGGAA 1139233 37 100.0 34 ..................................... CTGTAACCGATTAGTTTTAGGTTTCTGAGAGCCG 1139162 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ====================================== ================== 82 37 100.0 36 GTTTCAAAATGTGTCCTCGCAAAATGAGGATTGAAAG # Left flank : AGTGATACATGACCTGGCCATAGAGAATAAAACAATTGGATTATATGGCATGGTTGATACCGTGCTCATCATGAAGAATGGAGAGGTTTTGCCAGTTGACGTGAAATACTCAAAAAGCGTGTCGGTTAAAATTAACTGGAGGAAGCAATTGATCGCATATTCGCTTTTGCTTGAGGCCTATTTTGGTACTACGGTTAGGCGTGGAATCATCTATTTGCCCGCTCAGCATAAGCAGATCCAGGTTGAGATAACATGTGAGGGTAAAGAGATGGTTAAGCAGGATATCCGGAAGATAAAAGACTTAATAAAGAGCGAGAAGATGCCTAACGTGAATAAAGGCTTGCAATGTAATTATTGTGAGATGGCTAAGTTTTGTAGTTGAGGCGCGGCGCGTGAAGGTCTTAATAAATGGATATACGATTTTTTAACCTTCACAAATGAGTGAATTGAAGGGGGTTATACAAAGGTTTATTGGTCAGGAAAGCTATGTTTTTTTGGCG # Right flank : TATTCAACTTATCATCATATCTTAAAAGGATTAATGAATTTGAATACATTCTTGGCATACTAGTCAATTACATCTAAGACCCCAAAAAGTGAAATAGTCTCTTTTGTGGAACTTATATGATTCCATCGTGGTTTATGTGGCGACTAAAATTATCTCTTCATCCTCTATCCAATAAATGTAAATGATAGAATCGTATGAGCTGAAACTTCCATAACATTCTAAAAACAAAACTTAAAGAAATCCTTTCAAATCAACAACCTACAATACTAAAAAAATCTAAAAACAATAACTTCAAATTTTTGTTGACATTCCCAATGTTTCTTTGAGCATTTCCATATATCTAACTAGCTCTTGAACGCCATTTTCGGTTATCTCTATTGCTGTCCTGGGCCTGTCTGCTAATATTTTCCCTCTTTTTATATAATTGTATTCTTCAAGAGATTTTAGGTGCGAATCTAAGTTTCCAGGGGTTATTTCCAAGACATTTTGAAGGTCTTTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAAATGTGTCCTCGCAAAATGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //