Array 1 7886-3536 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATYD01000059.1 Rhodanobacter sp. OR444 RHOOR444DRAFT_NODE_51_len_17262_cov_405_207672.46_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7885 28 100.0 32 ............................ ATGCTGGTTCTGCTGATCATCTTCATGATCAC 7825 28 100.0 32 ............................ TTCGTCGAGGTCGCCAGCGGCGACTTCGCACC 7765 28 100.0 32 ............................ TGCAAAAACGAAGACCTAGGCCTGTGCCTGGG 7705 28 100.0 32 ............................ TGATTGGTGTCCAGATATTCACCAATGCAGCC 7645 28 100.0 32 ............................ GAGGGGCTGCAGAACATCGGTTTCGACAAGGC 7585 28 100.0 32 ............................ AACCCGTGCGCCGGAAGGTAGGCCCATGGTGC 7525 28 100.0 32 ............................ GTCGACCAGCTCGATGCGCAGGTGCTTGCGGC 7465 28 100.0 32 ............................ TCGATCGAACCGCATTCAATCGTGCGATGCAG 7405 28 100.0 32 ............................ GGTACCGTCGCCACGCCCGCCTGCGACCACGC 7345 28 100.0 32 ............................ ACCGTGCCGCACTCGCGGAAGCGGTCCATGGC 7285 28 100.0 32 ............................ AGTTGCTTGGCGCTGCTGACGGTCTGCTGGTA 7225 28 100.0 32 ............................ GCCTTGCCCCGGTACGATTCCCAGTCGAACGC 7165 28 100.0 32 ............................ TTGTAGAAACCGGGGTATTCGACGCTCTGGTT 7105 28 100.0 32 ............................ ACGATGGTACCCAGCGGGCCGCATGGGTCGTT 7045 28 100.0 32 ............................ ACGCACAAGGGCCGTGGCTCCTCGCGCTGGAT 6985 28 100.0 32 ............................ GCCACCATCTATCTGCACGGCGTCATCGGCGG 6925 28 100.0 32 ............................ AAGCTGATCGCCCAGATGATCGCCGACTGCGA 6865 28 100.0 32 ............................ AAGGGCACGGTCTGGGGGCTGTTGAACGCCGT 6805 28 100.0 32 ............................ ATCATCAACGTGGCGGCGATCATGAGTGAGGC 6745 28 100.0 32 ............................ CGAAGGTGCGGCACAACGGCGCTAAGGTGGAC 6685 28 100.0 32 ............................ GTCCCAAAAATCGGCGTAATCCAGCAGATCGA 6625 28 100.0 32 ............................ TGGTGGTGCCACTTGCATAGGCCGATGGTCGC 6565 28 100.0 32 ............................ ACGTCGCCGCCAGCCGCGGCCGCAAGGTCGAG 6505 28 100.0 32 ............................ ACGCCCAAGACGCTGGTGCTGAATACCGACTA 6445 28 100.0 32 ............................ ATTGCTGCCGAATGGAGAACGTCGCGTCGAGC 6385 28 100.0 32 ............................ TTCGCGGGGATTCGTACTCACATGCGCGAGAA 6325 28 100.0 32 ............................ TTGATGCCGGCACGCCAGCGGATGGTGACGCG 6265 28 100.0 32 ............................ TCGGTGTCGGAGGTGACGACGAGCTGGCGCGA 6205 28 100.0 32 ............................ GAGCACTGTCCGACACGATGATCCGGCGCATC 6145 28 100.0 32 ............................ AGTTCAAGCGCTCCCTAGAGCGCGTGTTTCAC 6085 28 100.0 32 ............................ AGCACGCACGCCAGCACGATCAGCAGGTGGCG 6025 28 100.0 32 ............................ ACGCAGCAGCACCTGGCCGACGACCGCTTCCC 5965 28 100.0 32 ............................ ATACAACGCATCCACAGCGGTACGCGCACCTT 5905 28 100.0 32 ............................ GCACCGCCGTGTCGCCGTCCAGCTGCCAGCTC 5845 28 100.0 32 ............................ GTGACCAGCGTGCCGGCTGCGGTCACCAGTAC 5785 28 100.0 32 ............................ AACCTGTGCGATGCCGACCTGTGCGATGCCGA 5725 28 100.0 32 ............................ CGCAGACTTCGCCGTCTCCGCGCTGGCGTACA 5665 28 100.0 32 ............................ TCGCCCAACCAGCGCAGGCGGTGGATGTGGAT 5605 28 100.0 32 ............................ AGGAAGCAGTCGAGGGCGCATCCATCCTCGAC 5545 28 100.0 32 ............................ GCACCCATGCGGATACCCGTGGGCAACCTACG 5485 28 100.0 32 ............................ TGACGTTCGAGGCGTGCGTGGTGGGTAACGGC 5425 28 100.0 32 ............................ TGGCCCGCCTTGAGCGCGGCGATCAGGCGAAT 5365 28 100.0 32 ............................ ACCGACCTCCTGCAACACCTCGTAGCGCCCAG 5305 28 100.0 32 ............................ ACCTGGGCCAGCTCGCGGGCGCCAGGCTTGTC 5245 28 100.0 32 ............................ ATGCCGTCGACGTGGGCGATGACCTTGGCCGA 5185 28 100.0 32 ............................ GGTCGACCCCGGCAGCGGCGTCGTGCGCATCG 5125 28 100.0 32 ............................ ATGGTGAGCGGCGTCAACATCCGGCAAGCGAA 5065 28 100.0 33 ............................ TCTCATCGTTGCCACTCGGCGCAGCGGCGTGAT 5004 28 100.0 32 ............................ AAGGGCACCGACCCGCGCGAACCGATGCAGAC 4944 28 100.0 32 ............................ TGATGGAGGCCACCCTGCGCGGCACCGACCGC 4884 28 100.0 32 ............................ ATGCGCAGATCCGCCACGCCGGCCTTGATGCG 4824 28 100.0 32 ............................ ACCGGCACATTGCTGCCGGACGACAACGGAAT 4764 28 100.0 32 ............................ GCAGAACGCCAAACTGATGGCGATGTACGACC 4704 28 100.0 32 ............................ ATGTCGAGCTGACCAGCCAGGCGCTGCGCCTT 4644 28 100.0 32 ............................ AGCACGCGCGCGGGACCGCCGACGGCGGGTTT 4584 28 100.0 32 ............................ AGCTGGGAGAAGGTTCGGTTGCAGCAGGGGCA 4524 28 100.0 32 ............................ GATGGGCGTTGGCCAAGGCCGCGCTGGGGCTC 4464 28 100.0 32 ............................ TGACCGGCCACCCGGAGCTGCTCGACGAGCTG 4404 28 100.0 32 ............................ ATGTAGGCGGCGCCCTCGCGGTGCCAATTCTT 4344 28 100.0 32 ............................ AGGTGAAAGTTGTCATCGGCAAGAACCCTTCC 4284 28 100.0 32 ............................ TTGTAGAAGCCGGGGTATTCGACGCTCTGGTT 4224 28 100.0 32 ............................ TCTCTGCCTACCCAGCACCCGCTTCCATCGGC 4164 28 100.0 33 ............................ TTCGGGGAACGGGTTGTGCGCTTCGAGCATCGC 4103 28 100.0 32 ............................ TTGTCCGGCGCGGTGGAGGTGGGGATTGGCAT 4043 28 100.0 32 ............................ AGGCCGACGTGCCCAGCCAGCGCGTGGTGCAG 3983 28 100.0 32 ............................ AGATCAGGAACGAGACGAGAGCCCAAACCTTC 3923 28 100.0 32 ............................ GTACTGCTGCGCGCCGACGTGCTCGCCTACAT 3863 28 100.0 32 ............................ CAGTTCAGGCCGGCGCGCTGGCGCCAGTCATC 3803 28 100.0 32 ............................ GAGTAGCCCACGTCCACGTCAAGCTGGGTCGG 3743 28 100.0 32 ............................ CGTCACCCGCGAAAGCTCGAAACCCTGCGCTG 3683 28 100.0 32 ............................ AAGCCGAAACGAAGGGATCGCCGGCTGAAACA 3623 28 100.0 32 ............................ TCGACATGCCGCACATAATCGCCATGCCGCAA 3563 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 73 28 100.0 32 GTTCGCTGCCGCGCAGGCAGCTCAGAAA # Left flank : CCGACCTGCAACAGCTGCTGGCCACGGATTGGCTGAAAGGCATGCGCGACCACGTCCGCACCGACAGTCTCGCCGCCGCGCCTGCTGGTGCACCGCACCGCACCGTGCAGCGCAAGCAGTTCAAGACTAGTGCCGAGCGCCTGCGGCGCCGGCGCATGCATCGCAAGAGCGAGACCGCAGAACAGGCCCAGGCCGCCATTCCAGCCAGCATGGAACGCCGCCCCAAGCTGCCCTACGTACACCTGCACAGCCGCAGTACGGGGCAACCCTTCTGCCTCTTCGTCGCCATGGGTCCACTGCAGCCACAAGTCACTCCCGGCAACTTCAACAGCTACGGCTTTGGCGGAGCCACCACCATCCCGTGGTTTTGACCCTTTTCTGACCAGCATCAGTCGCCCGTTAAAACTCAAACACTTACAAGCCAGCTTTCCAATTGGGGAGCTGGCCTCTTTTTTGCACTTACCGGCGGTTAGCTAAATACTTAGCTACATAAGTGCCTC # Right flank : AGCGTGAACGTGAGACAAGCAACCGCCCATGCTCGCTACCGCACGGACGGAAAACGTGGTCATTGTGTATGGTTGACCCCGGAGAGCGATCCTCTTAGGGGTACCCGAGGGGGCGGAATTTTTACGGGTTTCAGCAGCAAACGATTGATGAAATGGGTGTCGCATCCGTTTGCTGCATTCGCGACAAGTGGAACTACGCCCCAGCCAACTGCCTCCGCCGTGCCGCCTTGCGCCCTTGCCGCCGCATCCACCACGCCCTTCTGCGTTCGGCCACGCACGAGAAGATCACGTACAGCGCCGGGGTGCTGAGCAAGGTGAGGCTCTGCGAGATCAGCAGGCCGCCGATCAGGGCGATGCCGAGCGGGCGGCGCAGTTCGCTGCCTTCGCCGAGACCGATGGCGATCGGCAGGGCGGCGAGGATGGCGACCATGGTGGTCATCATGATCGGGCGGAAGCGCACGGTGCACGCCTCGCGCGCTGCTTCCAGCGGACTCTTGCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //