Array 1 41106-40243 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FMXA01000011.1 Allisonella histaminiformans strain DSM 15230, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                    	Spacer_Sequence                             	Insertion/Deletion
==========	======	======	======	===================================	============================================	==================
     41105	    35	  77.1	    43	.A.CG.CC....C.....AA...............	TGCATACAAAAAAGGCAATGAATAGCGCTTCATTGCAATTCGG 	
     41027	    35	  94.3	    41	...C.................A.............	GTGGAAAGGAAAGTATGCGGTTCTGTGATTATTGCGGGCGG   	
     40951	    35	 100.0	    44	...................................	AAGATTTAAAGAAAAAGGAGAATGATTAGCATGCTTACTAGAGA	
     40872	    35	 100.0	    44	...................................	TCGACAGCTATAGAGACGCCGTTCGCCTTGCAAGGGATAATGTT	
     40793	    35	 100.0	    42	...................................	TTCCGGAATGCGGTAATGGTTACATGGTGAATGATGAATATC  	
     40716	    35	 100.0	    42	...................................	TGGATTTGATATCTACGTTGAACATGTGCAGGCTTTTATTGA  	
     40639	    35	 100.0	    41	...................................	ATGATGATTATTTCCGGTTTGACGGTTACGGCCTGTTGGAA   	
     40563	    35	 100.0	    33	...................................	TATCACATTGCAACATACTTGTAAAGCCGTTGG           	
     40495	    35	 100.0	    43	...................................	GCGTACACAATGTCAAACGTATGCTACATGTACAATTTTTACA 	
     40417	    35	 100.0	    36	...................................	TCGTTTGTGTCTTTATTATATCAGACTGTTTCGACA        	
     40346	    35	 100.0	    34	...................................	TTGAGAAGAATTTTGAGGCTTAATAGGTGTTCTG          	
     40277	    35	 100.0	     0	...................................	|                                           	
==========	======	======	======	===================================	============================================	==================
        12	    35	  97.6	    40	GTTTTCGTCCCCATGTTTGGGGAATATTCTTTCAC	                                            	       

# Left flank :   GTGCTTTTTGCCCTTCGATTATAGTTCCTTAAAATAGTACGCTGATTATAAATTTTTCTAAATACAACCATGCGGCTTAACTCAAGACGAAAAGTACAATCCTCAAGCGCCTCAAACTGTGCTTTCACCTGTAATATATCTCTATTTGATGTTGACTCCAATCTACCAAAAAACTTACCTTCTGTAGAAAGCCATGTGACTGGAACATTCCGCTCTAAACAATCCACAATAATTTTTGATGATACCTGCACCTTATCAATAAGAGTAATGCCCTCCACTATTTCAGCTGGTATTTCTGCAATATTTTCCTCTCCGCGACTAATAACATAATGTCCCTCTTTCATTCCTAACTTTGCACCTACTTCGGTTAAGTATAACCAGCTCATACACTTCACTCCATTTCCTCCAATAAATGCTACTTTTATAAGCATAACAATTGTGATGGATATCCATAGGTCATATGTCTTTATGCTTTCTTCCTCACTTTTTCATAAATAAAC
# Right flank :  AGCAGGTCTGGGAGGCTCGATTGCATGAGCTCTCTGCACTCATTTCTCGGCGAGGTTCTCCTATAAAATCGATTCTTCATGGTTTCCTCCCGTAACCTTTTCTGTTTCCTTAGTCTCCATGCTTATCGGCGGGGATTTCACCCCAGCTGGTATCCTACTCTCCAGCACTAGCAGTAAAGGCTTTCTATTATTTTATCATTTAAATTATCATAAGACCATGGAATATCTCGCCCCATAATTAATCGGACTGCCTCATGAAGCAAGGAAATAATATCCTTTGCACGCAATCCCCCCGGAATTCCCAACGAGTTGTTCCAGTTCTCAGCAGTAGTCTTCTGTATCAAGTGATCATCCAGGTTTGTAATTTCATGGGCTACCAGGTTTCTGGTTCGTTCTTCCACCACACGAAGGTTACTGAAAATACAGGTAATCCTCTCATGATTCTTATGACCTTTCAATTCATTATGCTGTAAATATTCACAAATACGAACTATAGTACT

# Questionable array : NO	 Score: 3.23
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCGTCCCCATGTTTGGGGAATATTCTTTCAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:57.14%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-9.30,-10.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,0.64   Confidence: LOW] 

# Array family : NA
//