Array 1 13404-12973 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVFE01000027.1 Agathobaculum butyriciproducens strain OF09-27 OF09-27.Scaf27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 13403 33 100.0 36 ................................. GTGAGAGGCGGCCCGATCTGCGAGCGATAGCGAGCA 13334 33 100.0 34 ................................. TTTATCCGCGTCCAGTATAGCTCATTTGACATTT 13267 33 100.0 35 ................................. AACATTGGCATCAACAAGTTGCGCGAAATGACGGA 13199 33 84.8 35 ......T....CAC...A............... CTTTCTGGGTATTCGGGCAATGCGAGGGGTAAGTT 13131 33 84.8 31 ......T....CAC...A............... ATGCGCTGGCTGACCAGTGATTTCGGGTCAA 13067 32 84.8 30 ..........-.CGC.................T GTGTCAAGTATAGCACAGAAATATACAGGA 13005 33 81.8 0 ......T...TCAC...A............... | ========== ====== ====== ====== ================================= ==================================== ================== 7 33 90.9 34 ATCGCACCCCGTGAGGGGTGTGGGGATTGAAAC # Left flank : TAAAAATCGCTCTATTTTTGTGTACCAATATAAGGAAGTATGATGAAAAAACACATAGAATCAAAACACTTAGACATAATTGTGCGAAAAAGCATGGAATTCAAACAAAAATATGATTTTTCTGATGTCGAATTTGTTGGCGTCACGTGTATTCTTCTGCAATTGTACGGTGCTATCATAATAGGCGGAATTTACCTTGCAATAAGAGCTATTATAGGATTTTTCCTTTGACTTTCCGTGTAGAAAGATGTATAATAATTATATCGAACAAATGTTCTATATAAGGAGAGAGGTGATACCGATGATGCGCATTGCATTAGGTGCGAACCATAAGCATACATAATATTGCCGAAGGTTCGCACCTTAAAAAGAGTATATAAATTATAACACACTCAAAAACATTTAATATCGGACAATAAAAATGTTCGGTATTTATGCAAAACGCCTGCAACTTGAACAAGATGCATAAATTGTGCTTTGCGATATTGTGGCATTTTGCT # Right flank : ACGCGCTAACGGCTATTGAGGAAATGGCTCATGCATCGCACCCCATGAGGGGTGGGGAATATAAGAGGAGGTGTGATAATGGTTATGTCAGAAGCGGATTTAAAAGCATTACTTGCCCGCAACCCTGCTTTAAAAATCCGCAATTTATCTACAAAAACTTCAAAAAAATCAACTGATCACACCTCCAACCCCCAAAAAATCAAAGCACCGAAGTATCGCAATCATAAAGTGTACGTCTACGCCGATGGATACGCAGATATCACCGGTAAAGAGACTAATCATGGAAAAGTTACAACGGTTTATGATTCGCAAAAGGAGTTCCGACGACATTTTGAACTTATGGCACTTGAAAAAGCGGGGGAAATACATAATCTTCAACGACAGTATCCACTGGAGATTCAACCCGCTTTCTCTTATCAAGGAAAAAGAATAAAGGCGATTACCTACAAAGCAGATTTTTTGTACTACAAAAAAGGATCAGAAGTCCCTACGGTAGAAGA # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:0, 3:3, 4:0.55, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCGTGAGGGGTGTGGGGATTGAAAC # Alternate repeat : ATCGCATCCCGCACGGGATGTGGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.00,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : NA // Array 1 1-514 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVFE01000005.1 Agathobaculum butyriciproducens strain OF09-27 OF09-27.Scaf5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1 29 90.6 16 ---............................. CTCTATATCCTCGGTG Deletion [46] 46 32 90.6 37 ..AAA........................... CTCTATATCCTCGGTGATAAAATCTTTGACTGTCGTG T [52] 116 32 100.0 36 ................................ CAACTTGGCAAACGCAGCCGAAGCAATCGCTGCCGA 184 31 96.9 34 .................-.............. CGCTCAAATTGAACTCGGGCTGCGCATCAAAATG 249 31 90.6 2 .....................-.....CA... TG Deletion [282] 282 31 93.8 37 .....................-.........C ATCTGTAATGATTTTATCATACGCAAAATGGCGGAAC 350 31 93.8 36 ...........C.....-.............. TGACCTGCAGAACGCTCATCCGACCGCTATGGCTAA 417 32 93.8 35 ...........C..A................. CAATCATCCGATAGAGAAGATAGATATCGCATACC 484 31 84.4 0 .........T..ATA.............-... | ========== ====== ====== ====== ================================ ===================================== ================== 9 32 92.7 29 ATCGCACCCCGTGAGGGGTGTGGGGATTGAAA # Left flank : | # Right flank : AGCAAAAGCAGTCGCGTAAAAACGGCTGTTTTTTTGTTCGCAAAAATACAATAGAACAAATGTTCGATTTATATTGACGTAATATAAAATATGGGATATAATAAAAACATAGGAGAAGACTCCCACATACTAACTTAAAAGGAGATATTGATATGAGAACAAGACTTAGACGATTTGCAATCGGCGCTTGCTCTGCTGCGATGGCATTTGGACTGGCAGTACAGCTCGCAGGACCGGCAAAGGAAGCGTTTACAGCACATGCGGCTGCAGCGGCCACACCGACGGGTTGCACAATCTATGTAGATGGTACCAAGGTTAATGGTGCGGCGTACATGATCAACAGCAACAACTATTTCAAGCTGCGTGACATCGCAGCTATGGTAAATAATAGCGCAAAGCAGTTTGAGGTAAGCTGGAATCAGAACGAAAAGCGCATCGACCTCACCACCAACAAGGTTTACACCGTTGTCGGTGGCGAGCTTGCGCTCCCTTCGGCGACT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.64, 5:-1.5, 6:0.25, 7:-0.53, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCGTGAGGGGTGTGGGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.10,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA //