Array 1 2242104-2247761 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027783.1 Tetragenococcus osmophilus strain JCM 31126 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2242104 28 100.0 33 ............................ AAAATTGCGAAACGATGTCTTGCAAGTCGACAA 2242165 28 96.4 33 ..........T................. CAGGCAATGACCACAATAGGAATTAAGTAGTCA 2242226 28 100.0 33 ............................ TTAGCAAGTTCTTCTCTGGAATAACCTCTTAAA 2242287 28 100.0 33 ............................ TTCCTGAACTTAAAGTATCTTCCATGCTTAATA 2242348 28 100.0 33 ............................ AACTATTATCGCCTCTGCTTTCCGATACATAGA 2242409 28 100.0 33 ............................ GCTTGTAAAGCTCTTACTGTTGCTGGTCCTAAG 2242470 28 100.0 33 ............................ ATAATGTTGTATGGTCATCAAGAGCTTCTATAA 2242531 28 100.0 33 ............................ AAGGCGCATGGACACGCTTATATCACAATTTAA 2242592 28 100.0 33 ............................ TCCGAACCAAAAGCATCGGTTGAATAATAATCA 2242653 28 100.0 33 ............................ CATCTTCGAAGTCTTTCACATACTTATCGCCGG 2242714 28 100.0 33 ............................ CGCTGGATGAAGAGTTTGTTGTTGGTGATACTG 2242775 28 100.0 33 ............................ TGCCGAGTCAGCTAGAGTTAGTGGAAATGGAAA 2242836 28 100.0 34 ............................ TTTGATGGGCGGTTTAACATCTGTTTTTCCTAAG 2242898 28 100.0 33 ............................ CTAGCGCATTTCGTTGTTCTTGCGTTTTCATCA 2242959 28 100.0 34 ............................ TTGTTACTTTACCTTGTCTTTTGCACTCTTGACA 2243021 28 100.0 33 ............................ CTCTAATTTTTTAAGCAAAGGGTTAATACAATA 2243082 28 100.0 34 ............................ CGTTTAATCGATGACTTAGAACATACGCTATCAA 2243144 28 100.0 33 ............................ TCCCCCTAACTCTTGATGGCGCAGGTCGAGGTA 2243205 28 100.0 34 ............................ TACAAACCTAGAAAAAGTTGTAGGTAAGAAGGCA 2243267 28 100.0 34 ............................ TTTGACAATCTGTGGGGCTGTTTTTGAGGATACA 2243329 28 100.0 33 ............................ CTATTTTTTGAGATATCTCTTTTGCCGTTCCAG 2243390 28 100.0 33 ............................ TTCAATCCTCTGGGCCCTTTTCGAACGCCACCG 2243451 28 100.0 33 ............................ CATGTCCACGCAAGAGGATCGTATTATTTTCCA 2243512 28 100.0 34 ............................ GGAAAACATCGTACAAGCAACGGCTCGAGATGTA 2243574 28 100.0 33 ............................ AAGATGCTTTTCTGTCATTTATGAAAGATAATA 2243635 28 100.0 33 ............................ TTTGGGCATGAATGTAACGGTCGTGCGCGATGA 2243696 28 100.0 33 ............................ GCTAGGCTTTGGACTTCTTCAAGTGTTTCTTTG 2243757 28 100.0 33 ............................ TATTGGAGTAAACCTTTCGCTCCGCCTGAGCCG 2243818 28 100.0 34 ............................ TAATAGCATTTGATCAGTCAACAACGAACACTGG 2243880 28 100.0 33 ............................ TCCGTTGCCGGGCAGTCGTACTACAGCAAAATA 2243941 28 100.0 34 ............................ TTCGCGGAAACCTCCCAAGTCCTCGCTCAATGTA 2244003 28 100.0 33 ............................ CTTGACGACTTTATTTGCGATATCGACTAGGTA 2244064 28 100.0 33 ............................ ATTTCTTTTTTTCTTTCGTCAAAATTGTTCATA 2244125 28 100.0 34 ............................ CTTGACGAAACCATGAGTTTCGAGCGTTTGCAAA 2244187 28 100.0 33 ............................ ACCTCCCGTGGACTTGCATAAGCTTTACGCCTA 2244248 28 100.0 33 ............................ TGCTCTTGGGTTTTAAATTTATTCTTGTCTTTG 2244309 28 100.0 33 ............................ CTTTTTATATGTTCTAATAAACTTTCAATCTCA 2244370 28 100.0 33 ............................ ATGTTGAAGACGCCACGGCAAATGTGCTTTTTA 2244431 28 100.0 34 ............................ TCAATATCATAAACTCTGTCATATCTCGATATCG 2244493 28 100.0 33 ............................ CCGAAACAAGGCATATATTGGACAGTACACTGA 2244554 28 100.0 33 ............................ TAAAAAAGTGTTTTCTGCTTTTTGCCCTGATAA 2244615 28 100.0 34 ............................ GGTATTTTATTTTTTTTGTTTTGTGCCAACTGTG 2244677 28 100.0 33 ............................ AAGAAGGCAAACGCAATGAAACATACTATCAAG 2244738 28 100.0 33 ............................ ATCGCAGGGAAGTGAGTGGGATACTGTAGCTTA 2244799 28 100.0 33 ............................ TGGAATAATGCGTATCTGAAATATGAATGCTCG 2244860 28 100.0 33 ............................ TTCTTCAATCTCAAAAGCTACATCTTCTACTTG 2244921 28 100.0 33 ............................ TTTAATCCTTCACGACTAACATATTTTAAAACG 2244982 28 100.0 33 ............................ AAAAGTATATTTTCGTAGATTTACCGATAAATA 2245043 28 100.0 33 ............................ GGAATAAACTGTGGGATAGACACTAATCACGGA 2245104 28 100.0 33 ............................ TCTATGCCTCGACTGCCCTCTTGCCTCGTCCAA 2245165 28 100.0 33 ............................ ACATTAAACGCTTTGACAATTGGACCTGCCTTA 2245226 28 100.0 33 ............................ AAATCTCCTTTTATTGTTGTTGTAATTTTGGTA 2245287 28 100.0 34 ............................ GGAGATGGACGTCCTCGAATCTACTCTTGGGGTA 2245349 28 100.0 34 ............................ CTTACCGATTACTTGGTCATCTACGATGATTTTA 2245411 28 100.0 33 ............................ TCAACCAAGCGATAAGTTTATAAGCATATTTAG 2245472 28 100.0 33 ............................ CACGCCCGTCTTGAAAAACGTGTGCTTGAATGG 2245533 28 100.0 33 ............................ ATAAGCTCGATACGCAATACTCGGTGAAGCTGA 2245594 28 100.0 34 ............................ GCTGGCAAGTTAACCACAGAAAACTGGAATCAGT 2245656 28 100.0 33 ............................ AGATCCGCTTGTGTTTTGTTGCGTGCTAGCAGA 2245717 28 100.0 33 ............................ TTTCAACCGTGAGTGGCGTAACGTCGGAACTTA 2245778 28 100.0 33 ............................ GTTTAGAAAATAACATTCGTATTGTGGGTAAAG 2245839 28 100.0 33 ............................ AAGCAATGACCTGTAAAAGATGTTTCAATGGCA 2245900 28 100.0 33 ............................ CAACACAATCCGATGGCTACGTTATAGTAGCTA 2245961 28 100.0 33 ............................ AATACAGAATATCTATTAAACTTTAAAAACAAA 2246022 28 100.0 34 ............................ TGAATTAAACATCCTTTTGTATTCGCCATTTTCA 2246084 28 100.0 33 ............................ GACGTGTTTGCCTTACCAGAAAGCGATGAAGAA 2246145 28 100.0 33 ............................ GGCGCATCAAAACCTTCACTGACTAGATCCACA 2246206 28 100.0 34 ............................ TGAAATATATGGAAGGAAAAACGTTGCTTTTAGA 2246268 28 100.0 33 ............................ TAGCTTTCTTAGTCGTCTTCGCCATGCTTACCA 2246329 28 100.0 33 ............................ TGTGCCCGTTGTGGCCAAGTCGTTGATGTCTCA 2246390 28 100.0 33 ............................ ATTGGCAATTTTATTGCAGAGCATCAAGAAGGA 2246451 28 100.0 33 ............................ TGGATAACTTTAAATAAACGTGGAACTGATCTA 2246512 28 100.0 33 ............................ CAAGGAATTTAAAAGAGTACAAAGGAGCAAAAG 2246573 28 100.0 33 ............................ ATTTAGACGATTGCCAAACAGGAAATTTTGTGG 2246634 28 100.0 33 ............................ CTGCTCTCTAACTTTGCCGTAGTTACCTCCGTC 2246695 28 100.0 33 ............................ TCGATTATAACAAAATGACGTTTACCGCCAATA 2246756 28 100.0 33 ............................ TAAAAATGTAACTAAAAAAGATGTTATGCTAGA 2246817 28 100.0 33 ............................ TTTTAGGGTATGCCGTAAAATATTATAGTACCA 2246878 28 100.0 33 ............................ TCACAACATCGTTGATGATATAGGTCATTTCTG 2246939 28 100.0 33 ............................ ATGTATTAATGACTTACACACAAGGAAACGTTA 2247000 28 100.0 34 ............................ CATTCGAACTTTTTAAAAGATTATCCTTTAATCA 2247062 28 100.0 33 ............................ CACTTGAATTTGATCTTCAGCATAATAGACATA 2247123 28 100.0 33 ............................ GTATTAGCATTTGTTTTATTATGGGGTTATCTA 2247184 28 100.0 33 ............................ CTCGGTTTAGATAATTCAAAGCAAAAATATTAA 2247245 28 100.0 34 ............................ TCGGAAAACAGTGAAACACCTAAAGCACTAACAA 2247307 28 100.0 33 ............................ TGGCGGATGCTTTAAATTATTTTGAAAGTCCAA 2247368 28 100.0 33 ............................ TATTGGTGATCAAACTGGCGATAAAATGGACGA 2247429 28 100.0 33 ............................ ATCAATTCCAACGTCCTTTTTATATGGATGATG 2247490 28 100.0 33 ............................ TCTTTTATCTCTTCAGCTGTTAAAGTTTCACCA 2247551 28 100.0 33 ............................ CGCTCAGATTGCACAGAAGATACAAGATTTAAA 2247612 28 100.0 33 ............................ GTCAGATAAATTTAATAAAGAATACAACGTGAA 2247673 28 100.0 33 ............................ ATATCTTCATGTTCAATATCCCATGCCCCTAGC 2247734 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 93 28 100.0 33 GGATCACCCCCGCTTATGCGGGAAAGAC # Left flank : GTTACGTACAACAAATTCTTTAGAACGCTTAAACCGGGAAATTCGACGTCGGGAAAAAGTGGTTTCGATCTTTCCCAATGTCGTTTCCGCTGAACGTTTGATTGGCGCCGTTTTAATGGATATACAAGAAGAATGGCAACAAATGCCCAAACCCTTTTTACAATGCCCTGTCTTAGAAGAAGAGTTCCCATTCTCTACGGATTGATCTTGAAAGAAAACGAAGGACGATTTGACAATGAATGAAGGCATGGTATTCGCGGTAAGCGAAATGGGCGCCTGTTCTTAGGTTGAAGAACCGAAGAAGCCGCCCAAGATCACCATGCCTGAATAGATTCGTTGTCAAACCCGTCGGCTACCTGATCTTATTCGTCGTTTCTAGAAAAATTTAAACCATAAATAAAAAGAATCCTTATCAAATGATTAGAAAATCGTTCAACAGACAAAGCGTAAATGACATTGATATTTTTACACAAGATTTTGGGCTTGACCGCGAAAGACTA # Right flank : CAGTTAAAGATCCCTACAAAAACAGCATTTTTAATTCACCATTTTCAAAAATTTATTCACTTTTGTCGATAATTGATATATTATTTTCGCATCTTCCAGAGCTCGGTGAGGTACATAATCATCAAATCCATAACTTACTAAAGCTGTTTTTAATTTATAATCACTGAGAAGCATTTTTTCTCGTTTAATATACCGAATTAAATCATGAGGCTTATTTGATAACTTTATTAAGTCATGATCCTTTAAATATTTATTCAAAAAGCGAAGATCAAAGTCAAGTCCGTAACCAACTATAGGAAAATCTTCTATAAAGTCTACAAACTCCATTAATGAATCCTTTAAAGGTTGACCATTTTCATCTAATAAATCTTGAGTGATACCAGTTAACTTAATAATATCTGTTGGTAATTCCTTATCGTATTTAATTAATTGATGAAAATTTGTTAGTTTTCCTCCATCCAGCTTAACTGCTCCGATTTCAATAATTTGATTATCGTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCCCCGCTTATGCGGGAAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //