Array 1 245285-244345 **** Predicted by CRISPRDetect 2.4 *** >NZ_OLMM01000003.1 Acidaminococcus provencensis strain Marseille-P4266, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ============================================= ================== 245284 34 100.0 45 .................................. TAGGATCAAACCGGATAAACGGCTTGATCCTATCTCCCCCCTACT 245205 34 100.0 37 .................................. TACATCACGATGAGAGCAAAAACTAGAGAAGATTTCA 245134 34 100.0 43 .................................. TTGTTGTTCCAATCCCTTCATCGTTACCGCATTTTCATATTCC 245057 34 100.0 38 .................................. TTAGCATAAGATGTAAATCCAACGAGGATCACTCCCCA 244985 34 100.0 39 .................................. TTTTTGCTTGTCTTTATTGTATCAAATTATTGCCAACCT 244912 34 100.0 43 .................................. TATTTTAATTCCCCCTTTGTGTGTACTTCTTAATGGATACCCA 244835 34 100.0 43 .................................. TATCAGGTGTTGCCATTGCGGTAACTCTTTGATGCTTTTATTG 244758 34 100.0 44 .................................. TTATGCAACGGAAAAAATTACAATGAAGACCTGGATGCCTACCG 244680 34 100.0 44 .................................. TCTCGTGGTATTCCGGCGGTTTAAAAGATTGCGCGTTTCTGGAA 244602 34 100.0 39 .................................. CTTTGTTCGTCATCTTGTTCACCCCCTGTGAATGTGATT 244529 33 97.1 44 ......................-........... CCCGTAGCCGCCATCCTTCAGATGGAATACCGCATAGTAGTACA 244452 34 100.0 40 .................................. CTTAAAAGCAACTGCGTATTGGCATACGATGTAATTCTGG 244378 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ============================================= ================== 13 34 99.8 42 ATTTTCTAAATGATTCCCCGAAAGGGGACGGAAA # Left flank : GAGAGAAAAAGAATGTATCGTCCTGATTATCTATGACATCGTAGATAACAAGAAACGGAATAAAATGGTAAAGTGTCTGGAACGGTACGGCGTGAGAGTGCAGAAATCTGCTTTTGAGGCACTTTTAGGACGCAAAAAGTATGATCGATTAATTGATGAAAGCCATCGTATAATCGACCCTGCAACAGATTCCTTGCGTATCTATATTCTTGATTCTATTGTGAATGTCTACACCTGGGGACTGGGCGAACGGAAAGAAGAAGACTGCGTGATTTTGTAAGCTAAGAGAATAAGCAAAATTCTCTTTACGGACGACAGTAAGTCCTGTTATACTAAAAAGCAGTTGTTCTGCACTTGATAGTAAAACAGCGCCGGACCGCATGGGGTCTGGCTTTGCAGGTATTTTACCGCTGCTATGTGCACCCATTTCCTCCAATTTTACCAACAGCGCCGTTTTTCCCTGTTTTCAGCCAGGCAGAAAGCGGCTTCCAGGGGCTAGG # Right flank : TTTTTGCTATATGAGCTTCCTATAGCAAAGACAATTTTTTTAGCTTTTTCCCTTGGAGGCGTCACGATGACCAGTGAGCTAAAGGTTTTACAGCAGCAGTTCCCCCGGGTGCAGGCCTGCTGGGCTGCTATTGTTCTCTACGGGCAGCATTCTGCTACCTACAAATTTGCTTTGGCGCGGTGTCTGCTGGAGCTGGCGCAGCGGGGGCAGAAACGGGTCTCGCTGGAAGAGTTGGCGGTGCCCTATGCCTGGTACTTGTGTATCCACACGGCCAGGGCGCCTCGGCAGTTCACCAGTCGTTCCAGTACGGTGTTTCGCAGCTGTGAGGAGTTCAATGCGGGCAAAATCAACCAGGAGGCGCTGCTGCAGGTGGTGGTGCAGTACGGGTTCAACAATGTTCTTGACGCTTTCCACATTGTAAACGGGGAAGCGGTGCCGGTGCGGTTTTTTGAAAAGCGGTTTGTGGGCAGCAGCAAGGGTATTGTGCTGACGGAGGCTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTCTAAATGATTCCCCGAAAGGGGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.82%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 660738-670865 **** Predicted by CRISPRDetect 2.4 *** >NZ_OLMM01000005.1 Acidaminococcus provencensis strain Marseille-P4266, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 660738 33 100.0 34 ................................. TCCAATGCCTTTAAACAAAGGGAAAAATCAACGC 660805 33 100.0 33 ................................. CCGTCGCCTGGGCGAAATCGTAGAACGCTACGC 660871 33 100.0 34 ................................. TATTTGGCAAAGGTGGGTGGTTAAAATGCACGAA 660938 33 100.0 34 ................................. ATAATGCTCTACAGGAAAGAGGTTATAAATGTAT 661005 33 100.0 35 ................................. AATGTCCATAAAGCAACACCAGCACCAACCAATAA 661073 33 100.0 34 ................................. TGTTGAGGATGCAAAGACTGCCAGAGGACAGAAG 661140 33 100.0 35 ................................. CTTACGAGTGCTGGTATGACCATTGAATCTTACAC 661208 33 100.0 36 ................................. CTCATATAATAGACCATAATCAGGGTCTAGCCACTT 661277 33 100.0 35 ................................. CTGTACCTGAGAGGTATCCTTTTGACTCTCCGCTT 661345 33 100.0 33 ................................. TTCCATTGGGCATCTTCAGCCTACCCTGATGCC 661411 33 100.0 33 ................................. TTTCATAATTATTGAATCTTTTTGCAGTCCTTA 661477 33 100.0 33 ................................. ATGTGAAACTCTAATTGCTAAAAGGTCTATGGA 661543 33 100.0 35 ................................. CTGCAGGTACTGTGATAACAACAACAGCAAAGGCA 661611 33 100.0 33 ................................. CGTCACAGCTGGGTCAATGGGACCATAAGTGCT 661677 33 100.0 33 ................................. AACATCCCGCCCAGCCAGTTGAACAACGGCTTG 661743 33 100.0 33 ................................. CTCTTGACCTGGCAAAAGGAACGCTAGCGAATG 661809 33 100.0 33 ................................. TAATAATTCCCATTTGTCGACGACTTCGCAAGG 661875 33 100.0 34 ................................. AGGGATTGTCTTTCGTGCCCACTTAAAGCCATTC 661942 33 100.0 34 ................................. ATGGGCCATTGAGCCTACTAGTAGGGAAATGGAA 662009 33 100.0 33 ................................. GATGACCATTAGATGCCACTAAGGACTCATGAA 662075 33 100.0 35 ................................. ACCATTGTATCTAAGGTACTGCGCAATGATATTGC 662143 33 100.0 33 ................................. AACAAGACGTGGGAACTGACCAACAAGGTAGAA 662209 33 100.0 34 ................................. ACGAAGGGAAACGTTGTCCCGTCTGCACCCGGAA 662276 33 100.0 33 ................................. TGGATAAGCTGGATGTGCATGGTAAGGAAGTAG 662342 33 100.0 34 ................................. CAGGAAAATGTCGCTACAGTCCGTTTGGCACTCA 662409 33 100.0 37 ................................. GAAAGATACCGTCCTTACAAGATACCGGTTACAGGCC 662479 33 100.0 33 ................................. GCCAGGGGTGAGCATAGCTTTCAGCAGGGCTTC 662545 33 100.0 33 ................................. GCCATCTCTCTACCCTCCATTCTCGGCCTTTCG 662611 33 100.0 35 ................................. AGTGAATACATACCATAGAGGAAATGAGTATAAAA 662679 33 100.0 35 ................................. AGTTTGAAAAGAAGGGTGAAGATGGTGCTACTGGT 662747 33 100.0 33 ................................. TTGCTCTTGCTCTTCAGGTAATTCTGCTGTACA 662813 33 100.0 33 ................................. ACAAGAGGCGTTGATGACAAAACCGCTAGCAAG 662879 33 100.0 36 ................................. CGGAAGCCTCCTTTCGCGCATTACCACAATACGCGG 662948 33 100.0 34 ................................. TCTGGCACTCGCACTTACTAACCATGTAGCAAAT 663015 33 100.0 33 ................................. GGTGACGACGAAGGGGTTAGAACAGTTGGTTGG 663081 33 100.0 36 ................................. ACCGCAAAGAATGGACAGAAGGAAGCGGACTTTATC 663150 33 100.0 34 ................................. ACCCTGGTGAACAGCACTGCAAGCTATGCGCTTG 663217 33 100.0 32 ................................. ACAGGGATCTTGTCGCCTTCAGTCGTCCAGGT 663282 33 100.0 34 ................................. ACCCTGGTGAACAGCACTGCAAGCTATGCGCTTG 663349 33 100.0 32 ................................. ACAGGGATCTTGTCGCCTTCAGTCGTCCAGGT 663414 33 100.0 34 ................................. ACCCTGGTGAACAGCACTGCAAGCTATGCGCTTG 663481 33 100.0 32 ................................. ACAGGGATCTTGTCGCCTTCAGTCGTCCAGGT 663546 33 100.0 35 ................................. ATCGGTCCAGAGTACGGTCGGAGAGTCGAAAAGTA 663614 33 100.0 34 ................................. ATCCAGGGCATCCGTTAGCTGGTTGTATTTCAGA 663681 33 100.0 35 ................................. TCGGAACGCTCTTACCCAGCGGAGTGATTTCCCGG 663749 33 100.0 34 ................................. AGCAGGTCGAACACCTTGCGGATTGTGGCCTGCT 663816 33 100.0 34 ................................. CAGATCACATTGCCTTTGTAATTAATATAGGCAA 663883 33 100.0 34 ................................. GACCGTTGTTTCCACTTCCCATCCTGTTTGAAGC 663950 33 100.0 33 ................................. CTACAGGGCCGAGATCCCGGCACTGGTCAAGGC 664016 33 100.0 33 ................................. TCTAAAAATTAGTGATAGTGCATTGATAAGAGC 664082 33 100.0 35 ................................. AGTACCTCTATAGCCATCTTCATATCTTCTTCCAC 664150 33 100.0 33 ................................. TAACTCCCAGCACGTATATGGGAAGGCCGCTGA 664216 33 100.0 35 ................................. TTCGATGAGCTTGTTTCGTTCAGCTCCGATCCCGA 664284 33 100.0 33 ................................. TAAAGATAGAGCTGATGCTAATGCTATCTTTAT 664350 33 100.0 34 ................................. TTACAAGAAAGACTTAGGGGGCCTTGATAACTGG 664417 33 100.0 34 ................................. TAGGAGCCATTTCAATTTCATCAAGGACACCAGT 664484 33 100.0 33 ................................. AGGCTGTCCTCCGGTATCCAGTACATCTGGTGG 664550 33 100.0 35 ................................. AAAATGAGCTGGCGGCTGAAAGGGCAAAGAACCAG 664618 33 100.0 34 ................................. ACTGCATCGATTACGATGGAAACAACCATTCCTT 664685 33 100.0 35 ................................. CACGACGGCAAAGGTTATGCAGACATTGTGTTTGA 664753 33 100.0 32 ................................. ACGAAAGCCGCCTTTTCCACCGACCGGCTGGG 664818 33 100.0 35 ................................. GTTCTTCGTTCACCAAAAATCACCTCTTTACAGGC 664886 33 100.0 33 ................................. AAGAAAGCGTATAAATACACTATCGGTCTGGAT 664952 33 100.0 34 ................................. ATTTAGATCGCCCCTTCCATCTGGTTGATGCCGT 665019 33 100.0 33 ................................. CACCAGCTGGTGAAGGCTTTGACAGCCTGAGCG 665085 33 100.0 34 ................................. CGGGAGAAATGTCCCCCATGAAAACCTACCTCCA 665152 33 100.0 35 ................................. GTCCTCAGTAGGATTGTCAGGAAGAGTCATTGGGG 665220 33 100.0 33 ................................. CTGAGCTCTTCTTGGTCTTCCTCAAGCTGCTCA 665286 33 100.0 34 ................................. TAACCAATATTTGCAGGAATTGCGATCCATCCTG 665353 33 100.0 33 ................................. GTCAGCTCTCTTGGCAAGTCCGCCTCCGGCATG 665419 33 100.0 34 ................................. CGGAAGGGTATCATGCTGATGTCAGAATGAGAAG 665486 33 100.0 34 ................................. CGAGAATCAAGGACTTAGAGGATTACAACAACGA 665553 33 100.0 34 ................................. CCGTGGTTGTTGGGACTGTTGTTGGCATCCCGAA 665620 33 100.0 34 ................................. GCAGATGGTTTGTGGATGGTGGCGTGTTAATCGT 665687 33 100.0 34 ................................. TCAGAAGCTTATGGTCGCCTGCAAGTACCCCAAT 665754 33 100.0 34 ................................. CTTTGCCGCACATATGTGGCAGAGGACTGCTTGA 665821 33 100.0 33 ................................. TCGATGCCTCTATAGGTATGGTGTTCTCTCATG 665887 33 100.0 35 ................................. ATCTCACCACATCCATTTTAAAACTGGAGGAATTG 665955 33 100.0 33 ................................. AAGATTTCCTTTACGGACAAGGCAACCGTGGAG 666021 33 100.0 33 ................................. CGCTGGATGACGACCGGGTCTATCTGTGGAGCA 666087 33 100.0 34 ................................. ACGGCGTGTTAGACGGTTGACTGCCTATAGGCTC 666154 33 100.0 34 ................................. TGGAAACGGAAAACCCCGCTGATGCACGTTCTAT 666221 33 100.0 33 ................................. ATCTGTATATTTTTTGGTTACATATGGTTGCCT 666287 33 100.0 33 ................................. CCAAAGACATATCACCAGCATATGCTCCGACTG 666353 33 100.0 35 ................................. GGCGATGTACATAGCGGATATATCGCCCGGCGTGG 666421 33 100.0 34 ................................. TGTGGCACCAATCGTACCAGCATCGACGAACCAA 666488 33 100.0 34 ................................. ACCGCTCACGAGCATAAAGAGACACAACGGACCG 666555 33 100.0 34 ................................. CGCGGGCGGCTGCATGATAAGCGGCGTATCCGTG 666622 33 100.0 33 ................................. TTATTGACGAGGAAAGGTACGATTGCCACCACG 666688 33 100.0 33 ................................. ATCCAGATAATCAAAGCCGCTCTGGTTGGTGAG 666754 33 100.0 34 ................................. TACACCAAGGAGCGAGCGGTCAAGCTGGCCGAGG 666821 33 100.0 33 ................................. GCCTAAATCGCTGACATTCTTCCCCGCTTTGGA 666887 33 100.0 33 ................................. CGGAAGGAATGGGCGTTCCCGGATATATTTATA 666953 33 100.0 34 ................................. CCGACTACCTCAGCCGTCTTGTTCCAGGCCACAA 667020 33 100.0 35 ................................. ACGAAAGTATGCCATTGCATAGCCGCTTACCGCCC 667088 33 100.0 33 ................................. TTATTGACGAGGAAAGGTACGATTGCCACCACG 667154 33 100.0 33 ................................. ATCCAGATAATCAAAGCCGCTCTGGTTGGTGAG 667220 33 100.0 34 ................................. TACACCAAGGAGCGAGCGGTCAAGCTGGCCGAGG 667287 33 100.0 33 ................................. GCCTAAATCGCTGACATTCTTCCCCGCTTTGGA 667353 33 100.0 33 ................................. CGGAAGGAATGGGCGTTCCCGGATATATTTATA 667419 33 100.0 34 ................................. CCGACTACCTCAGCCGTCTTGTTCCAGGCCACAA 667486 33 100.0 35 ................................. ACGAAAGTATGCCATTGCATAGCCGCTTACCGCCC 667554 33 100.0 33 ................................. TTGTTGACGAGGAAAGGTACGATTGCCACCACG 667620 33 100.0 33 ................................. ATCCAGATAATCAAAGCCGCTCTGGTTGGTGAG 667686 33 100.0 34 ................................. TACACCAAGGAGCGAGCGGTCAAGCTGGCCGAGG 667753 33 100.0 33 ................................. GCCTAAATCGCTGACATTCTTCCCCGCTTTGGA 667819 33 100.0 34 ................................. TAGTCTTACAGGGCTTAAAGCCTTGCACCCCATG 667886 33 100.0 34 ................................. TGGTACATCCGCAGGAATGTATCCCGTACCCGTG 667953 33 100.0 34 ................................. ATTCCATTTCTCCCTTCATCTTCATCTGAGTTAG 668020 33 100.0 34 ................................. CCATAGAATACGTTGGATCTGCTTCGAAAGTTCC 668087 33 100.0 33 ................................. TCTACTATCTGGAAACAAGAAATGGACAAGAAT 668153 33 100.0 35 ................................. TTTGATCAGGTAGATGCGCTGCTGGATAGCATTGC 668221 33 100.0 35 ................................. TACTGATGTCAAGTAAATCCTCTCCTTTCTGCTTC 668289 33 100.0 36 ................................. ACCCAATATGTAGATATGTTACAGCGTGTGGACCTG 668358 33 100.0 34 ................................. AGTAAAAAGGTCTTAGCGAACGTATGACGCCACG 668425 33 100.0 34 ................................. TAGAGATTTGGTGATTATTCCTAAGGGAACTAGG 668492 33 100.0 34 ................................. GGTAATGACCCTGGCGTATGGTTCCAAACAATAT 668559 33 100.0 33 ................................. AGGGCTGGGACCTCGAATTTCCCGGCGCGAATA 668625 33 100.0 36 ................................. CGCTCCCGTGTTGGTGCTGGTGGCAAGGAATCCCGT 668694 33 100.0 34 ................................. TCATGAAGCTAATCGACGTCATCATAGACGACGA 668761 33 100.0 34 ................................. AAAGTTATAATCAGGCATGGAGCCACTATCTCCC 668828 33 100.0 33 ................................. TCGTGACAGCGTTAGGACTCACAATGTAAAGAA 668894 33 100.0 33 ................................. CAGGGCTTCCAGTGCCTGCTTACAGGCCTCTGC 668960 33 100.0 34 ................................. GTATTGACAAAGAACACGTACTCACCCATGGGGC 669027 33 100.0 33 ................................. GTACTTACCGACGTTATGAGCTGCTGAAAAACC 669093 33 100.0 33 ................................. CGCCAGGGCCGCCGCCTGGACCATCTTGATGCG 669159 33 100.0 34 ................................. CCTGAGCCGCTTGGCCCATCTGACCAACTTATGC 669226 33 100.0 33 ................................. TAGTGATGCTCTTTACAACAAAAGGCTTTGCCC 669292 33 100.0 33 ................................. CAGGTGGCCACAGCCGTGGCCCCGAAGTCGACG 669358 33 100.0 37 ................................. ATCAGCGCAGTGCTTGCCGTCTGGATGTCGCCTCCGG 669428 33 100.0 34 ................................. CAGCTGCCGTGCGCCTGGTCGTCCAGGACCACGA 669495 33 100.0 34 ................................. TTTAATGGAGACCGTGGGTGTGGGTTTAATCCAT 669562 33 100.0 34 ................................. ATCATGCCATCTTTTATTGCAGATCTTATATGCT 669629 33 100.0 34 ................................. TCCACGGTAATCTGAATCAATGGTCCCAACTCCC 669696 33 100.0 34 ................................. AAGCTCGATGCCATAGTCATCAAAGTATGCAAGA 669763 33 100.0 33 ................................. TTCCGACATGAAGGATACACGAAAGCGATTTCC 669829 33 100.0 34 ................................. CCGATTATCAAGGGTGGGAGGAACAAACAATGGC 669896 33 100.0 34 ................................. AATGTAAGCCTAACATTTGCGTCCGGTTTATCCA 669963 33 100.0 34 ................................. AATGTATTCGCCGCAGACATCGGCAAAGAGCTTT 670030 33 100.0 34 ................................. GGCACACTTTTGCAACCTTACTGCTGCAAAGAAC 670097 33 97.0 34 ...........T..................... AGCAACGGAAATTCTTAATAATTTGCTTGCTAAT 670164 33 100.0 33 ................................. TACGTTGCCCATGAGGACGACGCGGAACACCGG 670230 33 100.0 33 ................................. TGGTAGCACGTGCCCAATTCAGCAGCTACGACT 670296 33 100.0 35 ................................. ACGGGCTGGAAAGGCGCGTCTACTGGCCTAGCATG 670364 33 100.0 35 ................................. AGGAAGTCCATTGACATAGTGGGTCACCCAGTAGT 670432 33 100.0 33 ................................. GAGGTAAGCTGGAGCCATATGCCTGAGAGCGAG 670498 33 100.0 34 ................................. CGGGGTACCTACCACGGCGCAATTTAAGGACCCT 670565 33 97.0 34 ..........A...................... CTGTAGCACTTTTCCTGCTGCATGCTTCCTGCTG 670632 33 97.0 34 ..........A...................... CTCCCCGTGGTCAGAAAAGTAGACCAGACCCTGA 670699 33 97.0 34 ...........T..................... CTCCCCGTGGTCAGAAAAGTAGACCAGACCCTGA 670766 33 97.0 34 ...........T..................... ATGTAATAGACAAAGTCTTGAATCAGCAGGAGGG 670833 33 87.9 0 ...........T..A.............AC... | ========== ====== ====== ====== ================================= ===================================== ================== 152 33 99.8 34 GTCGCTCCCCGCAAGGGGAGCGTGGATTGAAAT # Left flank : AGGCAATATGGCTGTGCAGAAATTGTATGTATTCAAGCATGATTCTGTGATGGGTAATGTACAAGCCTATAAACTGTTTAACTGTGTGCAGGTAGAAAAGAAGGATGCCCAGAAAGTTGCACGCGCGTTTGAAGATTATGCTGTAATAGTAGATACCGCAGCTTGGCCGGCAGGGGTACACTGTACGGAAATGGTTGAGCAAGAAAAAGTAAAAGCATAAATCGACACATCACCATACGTGATAAAATGGCATATAATAAAAATAGATATCTCTTATTGTCAGGAATTCGGCACTTTGCATTTTGCAGGCGACAATGGGCACTTATCCATATTGGAATTAAGGCTGGATATAATCCAGTTGGAAAATTAATCCGGTTATGCGAACCAAAAGCTCCCATAAGTTTTAATAATGATTTTGCGTGCTCCAAAGGACTTGCTTTATGAGATTCGCAAAATTGTAGGTTGAATCCCGCAGGGATTCAGTGTTTTTTTGTTTGACA # Right flank : TGGGCCCAGGAATTCGGACCAGGCCTGAAAATTTTAAATGTATATGCTATAGTATAGGTAACAAGAACGGAGGCCGCTGCCATGGAAAGCCATAACTATTCTGCTGAATTTAAGGCCAAAATCGTCTTATCAATCCTTCAGGGTGACAAGGATTTTGCTGTTATTTGTTCCGAAAATCATCTGGATTCGGAGCTGGTTCGGAAATGGAAGCAGGCTTTTCTGCAAAATGCGCATCGTGCTTTTGAGGCAGATTCTGGGCGTAAGGACGTTCAAAGAAAGAAGAAGGAGCTGAAGCAAAAGAGTGACCAGCTGACGCTTGAGCGGGACTTCCTTCAGGACTGTTTTCGCAAGGCGGGAGAAGTCGTTCCCAAAATTCCCCAAAAGGATGCCAAGGACTGACGGTCTGGCTATCTGGCGGCCAAGCGAACTGTCTAGGGTAAAGTGTGCTGGCCTTCCTGTAGCGGCTGGCATGCGGGGGTCCATTGTACCTTGTACGAATT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //