Array 1 8990-11838 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDR01000061.1 Moritella viscosa isolate 06/09/139, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8990 28 100.0 32 ............................ TTTTCAAGTCGATGATAAAACAAGATTTAAAG 9050 28 100.0 32 ............................ CCATTGCAACTAAAAAATGGAAGTTTAAATTT 9110 28 100.0 32 ............................ GCCAACGCTGGCGGCGAAAATGAAAGAGTACA 9170 28 100.0 32 ............................ TTAAGGGTTTTAATCCATGAGTTAAGGCGAGC 9230 28 100.0 32 ............................ TGAGCAAGTACGCAACGTTTGACGAGTGGATC 9290 28 100.0 32 ............................ ACGAAATGTGGGCTAGCCAGGAGGAGAAATAG 9350 28 100.0 32 ............................ AGAGCCTGTATCACCAGTACCGGAACCAGTAC 9410 28 100.0 31 ............................ TAAATTAATTGCTGCATTATTTGTAGCTGTT 9470 28 100.0 31 ............................ AGCTGAAATTGACAAAGTTGAGTTATTGATT 9530 28 100.0 32 ............................ CATGGTTAATGTCTTAATGACAACGGTTTTAA 9590 28 100.0 32 ............................ AGAAGCCGCTTAGGTCGCAGGCTACGAGGTGG 9650 28 100.0 32 ............................ AGCAGCAAATGCTGAAAATGATGAAAACATAA 9710 28 100.0 32 ............................ ATAATCAAAATGGTCATACACTTCCTTTAGTA 9770 28 100.0 32 ............................ AACGGCCACGCATGTACTCAGGGAAACTATCG 9830 28 100.0 32 ............................ CCAGACCTGACTTTTTGAGTATATGATTTTGG 9890 28 100.0 32 ............................ AATCAAAAATGACAACGCAACAACAGAAGCAA 9950 28 100.0 32 ............................ AGATGAAACTGATTTGATAATCAAAATATCTT 10010 28 100.0 32 ............................ AAGACGAAAAGATTGCACGGCTTTGCAGTAAA 10070 28 100.0 32 ............................ CTCCGAAATTGGCACGCTAGTAAGAACTGGAA 10130 28 100.0 32 ............................ TCGTTAATCGGGGCTTTTTTTGGATGTTTTTT 10190 28 100.0 32 ............................ AAGTGCAGAAACAGTAACAACACCTGCTGTAA 10250 28 100.0 32 ............................ AAGACAAGGCCGAGTATCAAAAAAAACAAGAG 10310 28 100.0 32 ............................ TAACTTTGACGGGTTGTGAGCACCCATTGGTT 10370 28 100.0 32 ............................ GAAAAAAAAGCCCCGAAAACGAGGCAATTAAT 10430 28 100.0 32 ............................ TCCAAAAATCATAGAACGTGCTTTAACAAGCG 10490 28 100.0 32 ............................ TAGAGGGTGTTAGGTCGTCGTCTTTATCTTGG 10550 28 100.0 32 ............................ GCCCTGCGCCTCTGCAGTAGCAATTAAATTAT 10610 28 100.0 32 ............................ AAGGCACAGGTAATGCAAAGAACTTATTTCAA 10670 28 100.0 32 ............................ ACCGCTTGCACCATACACCGATAGCGTTACGC 10730 28 96.4 32 .........T.................. ATGGCGTCTTGCGTAAATAGCTGCTGTCATAA 10790 28 100.0 33 ............................ AGATTGAGACTCTTCTTTAATAGAAACTGTTTT 10851 28 100.0 32 ............................ AAATATGTGTGCATTGTAATTATGTAAAAGAT 10911 28 100.0 32 ............................ ACAAGAGCTAATCGAGTTACTTACTAAGACTG 10971 28 100.0 32 ............................ ACCGCGAATCGTGGTCAATAGCTCTTTTGCTT 11031 28 100.0 32 ............................ ACCGCAGCCCGGTTTCGTCCTCTGCGTTCATT 11091 28 100.0 32 ............................ TGATGGTACGGTTCTAAACGGCAATGGTGTTT 11151 28 100.0 32 ............................ ATTGGTGCAGATTTAGGAAGTGTCCAGATCGC 11211 28 100.0 32 ............................ CAGGAGAACGCCATAATAAAATAGATATTACT 11271 28 100.0 32 ............................ CAAGGGCCATTCGGCTTAGCCCATGTGATATG 11331 28 100.0 32 ............................ TCTGTATGTGCAAGGTTCTATAAAACATACAT 11391 28 100.0 32 ............................ GAACAAGTCGAAAAGATTGTAGATTTTAGTAC 11451 28 100.0 32 ............................ TTGATTCAACTAAACATTCGCTATGGCTTGGT 11511 28 100.0 32 ............................ AAGACCCGCATCACGATAAATTTTAACTAGAG 11571 28 100.0 31 ............................ ATGATATTCGATTCGATAAAACCAGAAAGTT 11631 28 100.0 32 ............................ AAGGTTATAGACGTGTAATTACGTGTGCGCCA 11691 28 100.0 31 ............................ AAATGTAGCAAGTTAAATCTATTGATTCATT 11751 28 100.0 32 ............................ TGATGGCGTTGCGTGTGTGTAATCATCAACAA 11811 28 89.3 0 ...........A.T...........T.. | ========== ====== ====== ====== ============================ ================================= ================== 48 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTAAATAAGTTGTTTGAATTAAATTGGCTTAAAGGTTTACGTGATTATTGTACTCAAACATACATTTCATTGGTGCCAGAGAGTTGCCAGTATTGTAGTGTAAAGCGTAAACAAGCTAAAAGTGCTAACAACAAACGTAAACGCTCTATCGCTAAAGGTTGGTTAAATGCTGAAGAGGCAGCATTAAAAATTGGCAATGAGCAGCAAAAAATACTGCGCTTACCGTTTGTTCAATTAAAAAGTACATCTACAGGGCAGGTGATGAAGTTATTCATTGAGCATAGCGTATTGCAAGATGAAGCAGTTGAAGGGACGTTTAATAGCTATGGGTTAAGCTCATCGGCAACAGTTCCTTGGTTTTAACAAAAAATAACCCAAAAACTGTTCTTTAAAAACGAGTCAATGAAATCAGTGGGTTACAATAGGTATAAAAATTAGGTAAAAATAGATATTTTTGCTTATCTGCTTGTTGTAACTTATTTTTATACTGATATTCTATT # Right flank : ATTGTATATTGTTATGAACATATTCAATCCATTTTTCTGAGTTCTATTAACTGGTTTGATTGGCGCTATTCTTGCGTTCCCTATTTATAATATAATCGGTATTAGCTCAAGCAATTGCTAATGCAGTTGTTGATGAGGTCACTGCTAGTGCGGAAGTTAGCGTGACAGGTGGGAGTTCAAAGGGACTGTATAAGGTAAGTTAAAAGACAGTGTAAACTATCGCCACTCTATCGCCACCTTTAATTTGATCGCCTTTAAGTTGTTGATTTTAAATTGGTTTAATTTGTATTTATATTGAAACCGGTAATATAAACAGTGAAGGGCACTACACTTGGATAGATATTGAATTAGCTTAATTTATCGTGTTGTAACTAACTTGTTCTAACTCAGTTATCGGATACAAGTGAGTTACAACTTAAGCTTCAAAGCTGTCGGTTAGAATGACTGAAGTATGGAAAAATTAACACCGCCAGAACGAACAAAAGTAAACTGTTTACAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //