Array 1 778545-777113 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019445.1 Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 778544 28 96.4 33 A........................... TTCACGTTCATTCATTTGGTAAGCAATCCTCTG 778483 28 96.4 33 A........................... CATATAAAACAGTCATTTAGCATTTCTATGCTT 778422 28 96.4 33 ..............C............. TATTCAGGGTGCCTATTTTCTGGCTGCGGTCTG 778361 28 96.4 33 ..............C............. TACGGCTTCAAACTGCGTCAGAAAACGGGAGCC 778300 28 100.0 33 ............................ CATGCTCGTCGCGCACATTGCGGCGCTCAATTC 778239 28 96.4 33 ..............C............. TTTGCTATCAGTTGGTGCGCGAGCTGCGCGGCG 778178 28 100.0 33 ............................ CATAGCTACGCCCAGCGCGATAATCGCCGGAAT 778117 28 96.4 33 ..............C............. TAGACTGATTGCGATCGGCTGCGGCATCTCCAC 778056 28 100.0 33 ............................ CGGGTCTTTACCATCAGTATCGGTAGCTTCTCG 777995 28 100.0 33 ............................ TTAGCGTAAGTTGCTGATTTAAAATGGTACGCC 777934 28 100.0 33 ............................ CTAAGACCTATTATTTCTTCGCATCACGACTCT 777873 28 100.0 33 ............................ CCATTCCTCACCCAGCTCGTCTTTTAGGCCCGT 777812 28 100.0 33 ............................ TTTTATTGATCCAAAAACCGCAGGCGGGTGCGG 777751 28 100.0 33 ............................ CTTATAGGAGGTGTTGTCGAAAATCGGCATAAA 777690 28 100.0 33 ............................ TCGTGCTATTGCTGTGTATATGACTCTGTTTGG 777629 28 96.4 33 ..............C............. TCTCTTTATCGAGAGCGCGAGCGGCAGCGGTGA 777568 28 96.4 33 ..............C............. TAATCCCGTTGAGCGGAGTCAGTAAGTCGGGGG 777507 28 96.4 33 ..............G............. TGGCTGAAGTTGACCGGTGGTTTCGTGACAGAA 777446 28 92.9 33 ...........TT............... CAGGTTCAGTTGAGCCACGCCGGTGACGGTAAA 777385 28 92.9 33 ...........A..C............. TGCCTTTATCGCTGATCCGCATTATTCTGGCCT G [777363] 777323 28 96.4 33 ..............C............. TAGCTTAGAGGGTTAATGTTCTATTCATTGAGC 777262 28 85.7 33 AC.........T.T.............. TACCGGTCATCCCGGCACCATCACCACGGCACA 777201 28 96.4 33 ..........T................. TGACCAGATCCGCAGTGCAAACCGCGCCTATGA 777140 28 92.9 0 .............T..........C... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 96.9 33 GTCTTCCCCACGCATGTGGGGGTGTTTC # Left flank : CTCTACAAAGAGCATCTCTGCATTGACCTGGCCTTCTCACTGACGCGAGAGATGGCTGGTCGTTACGATAAGCACCACGTTGCAGATGCCTTCAGAAAGCGGGTGATAGCAACAGATTTACTCAACCTGATCGCCGCAGATGTGAATTCGTTGCTGGGGAGTAAGCATGCTCGTCGTACTCGCCAATGATTTACCCCCGGCAGTACGCGGGCGAATGAAGCTCTGGTTTGTTGAACCCCGGCCAAATGTGTTCGTCTCTGGCGTAAAAGATGCCGTTGCACAGACAGTGGTTGATTACTTAATGCAATACACACCGCCTGAGGCAGGCCTGATGTTATTCAGAACGCTTCCCCAACCGCCCGGTTATGAAATTCGCTATAAGGGCGAAGTGAGAAAGCCAATTGCGACGCTGAGCGGATTACAGCTGATTATCGAAACCGTAAAAACGCTATAAGCGGTACATATAGTGTTTTAGCGGGGCTCTTTAACAAGATGTTGGT # Right flank : ATGTGTCCCTGTAAGTTTGTAGGTAAACACGTTTTTCCTTGCAGCCATAGGTGCGATGCTTTTGAATCTGTTCACTCGCTGCTTGTATATGCGATCCGCAAAGCGGAAGGCTTTTCGAACAAAAAATCGCCTTAAAAGATGGCGCCCACGTATAGTGCCATCTGCTTTTGGCATCTCAGTATGCTGATCGGCCTAAACCCGCCGATCAGTAATGCACCAGCCCGCCATCCACGGCGTACTGGCTGCCGGTAACGTATGACGCATCATCCGAGAGCAAAAAGAGCGCGACGGCGGCGGCTTCCTGTGCGGTACCGGCGCGTCTGAGCGGCACCTGGCTTACCACAAAATCCTCAAACTGCTGGCGCGACTCTTCGGGCATAAAGTGCCTGAAGTTGGTCTCAATCGGCCCCGGCACCAGCGTGTTGGCGCGGATATCGCGCGGTGCCAGCGCGCTGGCCCAGCTCTTGACCATCGCAACAACTGCGCCTTTGGTGGCGGCA # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCATGTGGGGGTGTTTC # Alternate repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //