Array 1 162545-166058 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKRB010000006.1 Chryseobacterium sp. NKUCC03_KSP contig00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 162545 47 95.7 30 ...T.A......................................... ATTACTTTACAAGTGCACTACCAAAAGTTC AA [162550] 162624 47 100.0 30 ............................................... TAATGGTAAAGTAAATGATGCTATAGATGC 162701 47 100.0 30 ............................................... ATCCAATTACAAGGGCAAACGATCACCGTA 162778 47 100.0 30 ............................................... TAAATGTTGTTTTATTTGTTCTTGCACCTC 162855 47 100.0 30 ............................................... AATTGCTGGATAGATTTAGCCTATCATATC 162932 47 100.0 30 ............................................... TAGAATCATGATTTATATGCTCTAATTCCC 163009 47 100.0 30 ............................................... GTTTTCACCATATTTTCGGGTTTTACTTTC 163086 47 100.0 30 ............................................... ATTTACCGTTAACTGCCGACGGTTATATAA 163163 47 100.0 30 ............................................... TTATTCAGTTCGGGCGTTCCCACCCCGCCA 163240 47 100.0 30 ............................................... GTACTTCTCTTCCATCGCCACTAACAACTC 163317 47 100.0 30 ............................................... ATAATATTATTGTTTATGTTATTGTAACGG 163394 47 100.0 30 ............................................... CACCACTCCTCACAGTCGTTATAATTTTTG 163471 47 100.0 30 ............................................... AAGATCTAATCGACTACATTCTTGAAAACT 163548 47 100.0 30 ............................................... TGTAGGTATAGATGTTTGAGTAGCTTCGTC 163625 47 100.0 30 ............................................... ATGTATTTGTTTGTTTACATGAGCAAAGTT 163702 47 100.0 30 ............................................... TTGAAATGAAAATAACCGCATTAATTACGT 163779 47 100.0 30 ............................................... CATAACTAGGAACATTCCCACCGTTAACAC 163856 47 100.0 30 ............................................... TTATTCAGTTCGGGCGTTCCCACCCCGCCA 163933 47 100.0 30 ............................................... GTACTTCTCTTCCATCGCCACTAACAACTC 164010 47 100.0 30 ............................................... ATAATATTATTGTTTATGTTATTGTAACGG 164087 47 100.0 30 ............................................... CACCACTCCTCACAGTCGTTATAATTTTTG 164164 47 100.0 30 ............................................... AAGATCTAATCGACTACATTCTTGAAAACT 164241 47 100.0 30 ............................................... TGTAGGTATAGATGTTTGAGTAGCTTCGTC 164318 47 100.0 30 ............................................... ATGTATTTGTTTGTTTACATGAGCAAAGTT 164395 47 100.0 30 ............................................... TTGAAATGAAAATAACCGCATTAATTACGT 164472 47 100.0 30 ............................................... CATAACTAGGAACATTCCCACCGTTAACAC 164549 47 100.0 30 ............................................... CATAACCTTTTCCCTCTGCGTTTCCGCTGT 164626 47 100.0 30 ............................................... TATATTCTTGTATTTATATAGTAGTATTGT 164703 47 100.0 30 ............................................... TCTACCGTTTCGGCTGCTTCTTCATCTGGT 164780 47 100.0 30 ............................................... TTAAGAGCGATAAAAGGAAGTGTGATTTCC 164857 47 100.0 30 ............................................... TTCCTTTTGCATAATCAACCAACTGGTTAC 164934 47 100.0 30 ............................................... TAATCTGTTCTACGATAACGACCTTCTCCC 165011 47 100.0 30 ............................................... CAGCCATTGTATGGAAGTGTTGCCGTTGTT 165088 47 100.0 30 ............................................... TGTCATAAAAATACGGTTGTCCTTCGGCTT 165165 47 100.0 30 ............................................... AAGATTCCCCATCTGAATAAGACCGTCACG 165242 47 100.0 30 ............................................... AGTAGAAAAGGAATTCATGTTCCACCTGGT 165319 47 100.0 30 ............................................... TGTGGTGTAGACTTATTGATTGTAAAACTT 165396 47 100.0 30 ............................................... TTCCCAACGCGACACCTCCAAGTCCTACTG 165473 47 100.0 30 ............................................... CATAACTTTCATAGTCACCAAAAGAATCTA 165550 47 100.0 30 ............................................... TGTCATAAAAATACGGTTGTCCTTCGGCTT 165627 47 100.0 30 ............................................... AAGATTCCCCATCTGAATAAGACCGTCACG 165704 47 100.0 30 ............................................... AGTAGAAAAGGAATTCATGTTCCACCTGGT 165781 47 100.0 30 ............................................... TGTGGTGTAGACTTATTGATTGTAAAACTT 165858 47 100.0 30 ............................................... ATCCGGATAAGAAAACATGGAAAGCATTTC 165935 47 100.0 30 ............................................... TGGTTATGGTTATGGTTGTCAGTATTATGT 166012 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 46 47 99.9 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Left flank : AATGCTAACTGATGCAAGTGCTCTTAGCGGCTTATCGGCAGATAATATCGCTATGGTAAAAATTATTAAAGACGGCGCAATTGGTATGAGTGGCGGTGGTAGCGGAGGAGTACTTATTTATACCAAAAGAGGAGATACAAAACCTGTAACCAAAGCAAACTCACTTTCAGAAATGGTCAATCTTAACTTTTTTGTTATGGAAGGTTATAATACATCTGAAAAATATCCCGATTCTGATTATGGAAATTCTGAATTGTCTAAAATAAGCAGTGATCACAGACCTCTACTCTACTGGAACCCCAATATGGAAATAGATTCAGATACTCCTGCAAAGATTGACTTTTATAATAATGATACTGCAAAAAAATTTCTTTTTTTGATTATGGGATTTGATGCTGAAAAATACACTCCTATTTATTACGAAAAGCTTTTGCCATAGTTATTTTTAAGTATCTAAAATATAAACTTACAGTTCCTGAAATTATTTTGGGAACTTTTTT # Right flank : CCTCAAAATTTAACCCATTGTTTTTCAATGGGTTTTATTTGTTTTTAGGATTCTAAATTTAGAATAATTCGAGCTGTTGGAAGGTTGGTGGTGGCTCTTCTCGATTTCTGGCAAAAAAGATCTCTATGTCTCCAAATTGTTTATCAGTGATGCACATGATGGCTACTTTGCCAGCTTTGGGAAGCATAAATTTCACTCTTTTAATATGTACTTCGGCATTTTCTCGACTTGGGCAATGGCGGACGTACATCGAAAATTGAAACAATGTAAAGCCATCATCAATGAGGCCTTTGCGAAATTTGTTGGCATCCCGCATATTGGTTTTGGTCTCGGTTGGCAAATCGTATAGTACTAAAACCCACATAATTCGGTAAGCGTTAAATCTTTCAGCATTCATTCGTTTTTTTGAAATGGTTATTTCTTGACTTTCTTTTATTTCTATCTGTGAGTTGCAGCCCGACCTGAGTGGAGCTCTTTTATATTTTTTTCTCAGAAAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //