Array 1 32213-30728 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAQPH010000005.1 Pelagibius litoralis strain DSM 21314 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 32212 36 100.0 30 .................................... GACGCAGCGTCACACCAGTCTCAATCCCGT 32146 36 100.0 30 .................................... CTGTTCGCCTTGTGCCGATGCTTCGCCAAA 32080 36 100.0 30 .................................... GGCGCTTTCATGGGGCCATGAAGAACAAGG 32014 36 100.0 31 .................................... TGTATGCCCTCCCGCATAGCACCCACCAGAA 31947 36 100.0 31 .................................... TTGATACGTCAAGGCCTTTCGGATTCCAGAA 31880 36 100.0 30 .................................... CTGCCCGTCGCGTAAGTGATGTAGCCAATC 31814 36 100.0 30 .................................... CCCTTTGCGGTGCGGCCGGCATCGATATGG 31748 36 100.0 30 .................................... GGGCGAAAACCCTTCGCCAGGATCAGCCGG 31682 36 100.0 30 .................................... TCTGACGGTTCACCGTCGGGGGTGCGAGGC 31616 36 100.0 28 .................................... TTACCGGATGGTCCAGATGCGTTGCGAG 31552 36 100.0 30 .................................... ACGGAAGCGTTGCTTCCGCTGACGGCGTCA 31486 36 100.0 30 .................................... GCAAGGCCTCCAAGTGCGCGCCGGTAGCCT 31420 36 100.0 30 .................................... GAACTTGATCGGGTCCGCAGACTGCGTTGA 31354 36 100.0 30 .................................... CAGTATACCCGGCAGGTTACGGGCGATATC 31288 36 100.0 30 .................................... TCAACTTCACTGCTGGCTATTCCACAGAAG 31222 36 100.0 30 .................................... GTGTTGCTCTTATGCCAGTTGAACCGCGGC 31156 36 100.0 29 .................................... CTGCACCGCTCGCACCGTCGGCGCCGGCC 31091 36 100.0 30 .................................... CGGTCATCGGGTCGGTGAAGCCGAGGATCG 31025 36 100.0 29 .................................... ATGGTCTCTTCGCGGGTGTTCCCCGGCAA 30960 36 100.0 30 .................................... CAAAGATGTCTTGGCGACCCTTATTCCGGT 30894 36 100.0 30 .................................... TTTGTCATCTTTGGCTTCCAAACGCCAGCC 30828 36 100.0 29 .................................... TTGCCGGGCGGCCGCCTCGGCTTGCGACA 30763 36 94.4 0 ..................................TT | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.8 30 AGTGTAGCACTCAGAGAATCGCGATCCAGCCGCAAC # Left flank : AGGCCTCGCTCGAATTTCCACTGCCGCCCAAGTCGCTCGATCTCGGCTCTTTGGTGACCGGCTGGCAGGTCAAGTGACGGCCCGAACGCTTGATGGTGGATATTTGAGTGGATACCGCCTTATGTGGATAATGGTCATGTTCGATCTGCCGGTCGATACCAAGGAACGGGGCAAGGCTGCGGCTAAATTCCGCGAGTTCCTCTTGGATCAGGGGTTCGAGATGAGCCAGTTCTCGATTTATCTGCGATTTTGCAGCGGCAGGGAGCAGTTCGAAGCCTTCTCGCGCCGGATTGAGCGGAATCTGCCTGAGTTCGGCAAGGTTCACATCCTTGCCTTCACCGACAAGCAGTACGAGAATATCGTTCGATTCAACGGAAGAACCCGGGCAGCCACGCGGAAAAACCCTGGTCAGCTAGCCCTTTTCTAAGTGTAGTGGAGCATTTCGGCATGAACGATAACCGCTCAATTCCCATGAATTTCAAGGGATTGAGCGGTTATCT # Right flank : GTGCCTCCATGTTGCCGCGCCGCCGCCCCGCATGCCAAGCTGGCGATCATGCCCGAGCTGCCTGACATCATGGTTTACATCGAGGCGCTGGAAAGCCGGGTGCTGTATCAGCGGCTGGAGAAGGTGCGTCTCGCCAGTCCCTTCCTGCTGCGCACCGCCGTGCCGCCGATCAAGTCGGCGGAGGGACGCAAGGTGGTGTCGCTCAGGCGCCTGGGCAAGCGCATCGTCTTCGGGCTGGAAGGCGATCTCTGGCTGGTGCTGCACCTGATGATCGCCGGGCGCCTGCAGTGGAAGCCGCCGGGCGCGGCGTTGCAGGGCAAGGTGGGGCTTGCCGCCTTTGACTTCGCCCACAGTGACGGATCTGGCGGCAGCCTGACCCTGACCGAGGCCGGCTCCAAGAAGCGCGCCTCCCTGCACCTGCTGGAAGGCGCGGAGGCCCTGGCGACGCTGGACCCCGGCGGGCTGGAAGTGCTGGAGGCCGATCTGGCGGCCTTCACCAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCACTCAGAGAATCGCGATCCAGCCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //