Array 1 478840-477350 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSGR01000008.1 Streptococcus parauberis strain SP158-29 A9Y57_contig000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 478839 36 100.0 30 .................................... GAGATTACTGTAATCGTCAAGGTTTTTGTT 478773 36 100.0 30 .................................... TTTATGATTTACTTTGAAGAAAGTTTTCAA 478707 36 100.0 30 .................................... AGCACTCAACTTATTTGTGAATGATGCTAT 478641 36 100.0 30 .................................... AGAATCCATATTATAACTTACATAGTTATA 478575 36 100.0 31 .................................... CAAGTGATGTACCAATACTTAATACTCAAAA 478508 36 100.0 30 .................................... ATTACTTTTACTAGTTTTGGAAGTAATAGA 478442 36 100.0 30 .................................... GCTTCGTGTCTGCTCCAGTTATATATGCAT 478376 36 100.0 30 .................................... TCCCTCGATTGTTACATCAAGAGACATTAC 478310 36 100.0 30 .................................... AGATTTATATCGTGAGTGGAAAAACGAAGA 478244 36 100.0 30 .................................... CTATGTTAAAGTTGAACCGTCTAGCACTTA 478178 36 100.0 30 .................................... AGAAGTTGACTTTATCAAAAAACAATACAC 478112 36 100.0 30 .................................... GTTACGAACTAATACCAGAGCGTCCTTTCG 478046 36 100.0 30 .................................... GACCAATTCAAACTCATAAATGTTCTTACT 477980 36 100.0 30 .................................... TCAACATAAGCATCCAAATTAAGCGATTGT 477914 36 100.0 31 .................................... AATGGACATGGTGTTTTTATTTTACAGTAAA 477847 36 100.0 30 .................................... TCCATTATTTTGGATAGTCCACTCTTGTTT 477781 36 100.0 30 .................................... TGGTGGTTCACTTACATGGGATTTACCACT 477715 36 100.0 30 .................................... TGTTCCGCTAGAAGCATGTTCAGTCCGTTG 477649 36 100.0 30 .................................... AGAGAAAGGAATTAATGAATCATTTTCTTT 477583 36 97.2 30 ......A............................. AATTGATTCAGCTGGTGCAATCTATGCATT 477517 36 100.0 30 .................................... TACCTTTTGCGGACGGCATAATTTGCACAT 477451 36 100.0 30 .................................... ATCGGTTGCGTAGGTGAAGAGTGGAGTGCT 477385 36 97.2 0 ..................................T. | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.8 30 GTTTTAGAGCTATGTTATTTTGAATGATTCCAAAAC # Left flank : AAAAACCAGAAGTTAAATCAATGGTCGATAAACTTGCTGCGACTATTACAGAACTAATTGCTTTTGAATGTTTGGAAAGTGAACTTGATTTGGAATATGATGAAATAACAGTACTCGAATTAATCAAAGCATTGGGTGTCAAATTTGAAACACAAAGTGACACAATTTTTGAAAAATGTCTTGAAATTCTACAGGTGTATAAATACTTAAACAAGAAAAAATTGCTCGTTTTTATCAATACCGGTTCCTACTTGAGCAAGGAAGAAGTAGAACAATTGTTTGAATACATCTCATTGTCGAATCAATCTGTTTTATTTTTAGAACCACGGAAATTATATGATTTTCCTCAATATATTTTAGATCAAGATTTCTTTCTTATGTCTCCTAAAGTGGTATAATAGTAGTAGAATGGATCCCCGAAATAGGTATCTTTCAAAGTTGAAGTCCTGCTAAGATGAGTAGCGCGATTACGAAATCTTTTGGAAAAATTATTCCACGAG # Right flank : CATTATGTTAATAAGTTTTTGTAGTCTTAGATTTGTTGTTTATTAAAGTCCTTTTTGCCTATTTTATGAGGTATCCCCTTGCTTGATCTGCTTATCCAAATGATAGTCATTGCTTTTTGTATTGTCTTATATCCCAACTAGGATTTTTTTGAATATTTATTATGTTTTTTGGCTAGAATATAAATTTAAAAAGCACTATTTTCATTAATTTTCTTTGCAAAATTTCTGTAAAAAGCTTGTAAAATAAAGGCTTCTGGTTAATTATCAAATGATTCTAGTTTTTTATTTGCAAGCCCTTACATATGTGCTATAATGAGAAAAAATAAGAGGAGACTTTCTAATGGAAAAAACTTTTTTTATGATAAAACCGGATGGTGTGAAACGTGGTTTGATTGGTCAGGTTTTGTACCGGATTGAACGTCGTGGTTTCAACTTGGAGAAATTGGAACTCTGTCAAGCGAGTCCAGAATTACTAAAACAGCATTATAGTGCTTTGGTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTATTTTGAATGATTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //