Array 1 207059-203909 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJRL010000032.1 Acinetobacter baumannii strain 172830 NODE_33_length_216759_cov_100.692688, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 207058 29 100.0 31 ............................. TAAGAAAGGGGGCGTTAAAGAAGTAACTCGA 206998 29 96.6 31 ............................T TATCCTGGTGATTCAAGCCCATATCTTGAAC 206938 29 100.0 31 ............................. TAGTCGCTTGCGGTACGATCTTAGCTGCACC 206878 29 100.0 31 ............................. AATCAGTTTTAAGGTGTAACTGGTGCAATCA 206818 29 96.6 31 ............................T GCAGTTCTGCGTTACGTGTTTCAGGATGCAT 206758 29 96.6 31 ............................T AAAGGGCGTGGCAAAGGCATTACGTGTGAAA 206698 29 96.6 31 ............................C TCTACACCTTCGCGAATAAGTACGCAGGGCT 206638 29 96.6 31 ............................T TCATGCGTGATGCAAAGCGACTTGCTGCAAT 206578 29 96.6 31 ............................T GAGCAGGTCGGTTATTCTGAACCTGAAAATA 206518 29 96.6 31 ............................T CCAAAATACCTTTGAGGACCTTGTAGAAGCC 206458 29 96.6 31 ............................T AAAACCATTGTTACTAGATGTACCTGTATTT 206398 29 100.0 31 ............................. GTCAGGCCCTAGCTTTTGAGTCACACTTTCG 206338 29 96.6 31 ............................T TCTGCACTCTGAAGATAAACATTACAAGTAA 206278 29 100.0 31 ............................. CAAGCGATAACTTGCCGCCAATCACTGTTTA 206218 29 96.6 31 ............................C TCAAGACATCAAGATCAATAAGACAGTTGAG 206158 29 100.0 31 ............................. ACAACGCAGTATTTTTGCGATGTTGCAAAGC 206098 29 96.6 31 ............................T AATGCTCAAAGTTATAAAAATAAGACTCCTG 206038 29 96.6 31 ............................T GTTGGGCCAATAATCAGAGTGTGGCCTACAT 205978 29 96.6 31 ............................T CAAGGATTGACTCACAAGATCGGTAATTGTA 205918 29 100.0 31 ............................. GTCTGACCATGGCCCGATATTCCCGATCCGG 205858 29 100.0 31 ............................. TTAGAACCAAAAGTTACTTCAAAAGAACGAA 205798 29 100.0 31 ............................. ACTATTCCTAAAATAATTGATACATAGATAA 205738 29 96.6 31 ............................T CTACAGCAGCCGTCCAACGGTGTGTATCGAT 205678 29 100.0 31 ............................. TCAACAACAATGGTTAAACTGCCATTAATCA 205618 29 100.0 31 ............................. AAGACAGTATTTTGGTAGCGCATCTCCTGCC 205558 29 96.6 31 ............................C TTGTACGAGCGTATTAAATGTACCTTCATCA 205498 29 100.0 31 ............................. ACCGATGAAGCACGAAACACAATCATGCTTT 205438 29 100.0 31 ............................. TACGGCGGATGATGTGGTTCGCCTTCATAGC 205378 29 96.6 31 ............................T TTAGCCACAGCACCGTTTACACTTGGAGCAG 205318 29 96.6 31 ............................T AGTGCACGTAGGTCATGAAAAGATGGGCGTT 205258 29 100.0 31 ............................. GAAGTACGAATCAATGTGAATGAATAACCAA 205198 29 96.6 31 ............................C AGTAACAGCAAAAACAAAAACAGTAACTAAA 205138 29 96.6 31 ............................G TACAGGGGAATTCACGTAGTGCTGGAACAAT 205078 29 100.0 31 ............................. ATCACCATCATCGGTGGCATTAGCTTCAGAC 205018 29 100.0 31 ............................. TCACCAGTGCCAGTGCCAGTGCCAGTGCCAG 204958 29 100.0 31 ............................. ATATTCAAGAACCAGTTTCAAATATTGTTAT 204898 29 96.6 31 ............................G TATGTAGAGTTGAAATGTAGTCCTGCGAAGA 204838 29 100.0 31 ............................. CCACTTGTCTTGACAGCAACTATTGAATCCA 204778 29 100.0 31 ............................. TCTCCCATTCTTCATCTGACTTCAGAAAATC 204718 29 100.0 31 ............................. GAATGTCTAAAATATCTGAGGCATCAGCAGA 204658 29 96.6 31 ............................G TCATCAATACGCTTCAGTGCATCAATGTCAT 204598 29 96.6 31 ............................T AACAGAAGCGCAAAAAAAAGCGTATATCATT 204538 29 96.6 31 ............................T CACAGTATGAAAAGATTGGTGATGCTTCGGA 204478 29 96.6 31 ............................T GAAAAACGTAACGCAGAACTACAAGCTGTTA 204418 29 96.6 31 ............................T TCCAATTCGCATAATGAGCACTGATGTTAAA 204358 29 100.0 31 ............................. AACGGTAAAGTCATTCCATTTGTACGTTTAT 204298 29 96.6 31 ............................T CACAGTATGAAAAGATTGGTGATGCTTCGGA 204238 29 100.0 31 ............................. CTTGATGCAGGTCAGTGCAATAAAAATGATC 204178 29 96.6 31 ............................G ACATGGCTATGAAGTTTTATACACATACAAT 204118 29 100.0 31 ............................. CAACAACACTGTCAACCTTTAGCTAATAAAT 204058 29 100.0 32 ............................. TTAAGCCTTTGATTCCATTGGGTTTTTCTTAG 203997 29 100.0 31 ............................. AGAAAGGTCTAGCAATTGGGGCTGTAGGTAC 203937 29 89.7 0 ........................AT..T | ========== ====== ====== ====== ============================= ================================ ================== 53 29 98.1 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGACACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTCTACACGGTAAAACACGTCGTGGAGGACTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAAGATGGCGTCAATTGAACAAATATAATAATATACTGATTTATCTTAATTAATTTTTATAAAAAAATCCCAGTGTACATGACAGTGTACAAATTATATGTTGCTGGCCTATTTCCTTCGGGTTTGGTTGCTATATACGGAGTACAACTCATGTATTAAACACCTTACTGGCAATCCAGTAACACTACCCTACTCCACCACTTACACAGCATCACTTCGACATCTCGTCAACGCAATTTTGCGTTCGGCATTGTTTTCAAAAGTTTATCCAGAATTAGACGCACCTAAAACCCGATAAAACCCTATCAACTCTTATCATTAGCTCTTAATAAAACGTAGTCTTTTATCCAGGTAGCTACTACGAATTTCTCGTAGTAAGGCACTGTATTTGAAACATGGAAATGAGATTCCTTAAATTAGCGATAAACCTTGTTGTATATAGCTTCAAG # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.67, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 212615-213121 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJRL010000032.1 Acinetobacter baumannii strain 172830 NODE_33_length_216759_cov_100.692688, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 212615 27 75.0 27 T...C.-....A......AG..G..... TTAATGCTTAGCATTGATTGATATGTG 212669 28 85.7 29 ...T.C.............G.......T ATAGGGCAATTCTGATCTTAAGTATTTAT G [212674] 212727 27 78.6 39 ....GC..C.AT...-............ GCCCTATTTTTCATTTTTCCTTCAAAAGTAATTTTGAAA G [212745] 212794 28 85.7 32 C..T......A.C............... CAGCGTTCTGCTTTACCGTTTACATATCGCGG 212854 28 92.9 32 ............CC.............. TTGCTTAGGCAAATGCACTGATTTTAAAGAAG 212914 28 100.0 32 ............................ TATCATGAACATTGTTCCTTGACCCACGGACA 212974 28 96.4 32 .........T.................. ATTCGATAGACTGATTCTATAAGCTTATTTGC 213034 28 96.4 32 ...G........................ TGAGGGTGCCACACATTGGCAGGCTGGAGTGT 213094 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================= ================== 9 28 90.1 32 GTTATTCATCGCATAGATGATTTAGAAA # Left flank : TGCTGCTAAAACTGCGCTAAAGCAATTCAAATGCTCACCTAAATCTACTCTATTTTGAGGATATGGCATGAATGAGCAACCTGTTGTTAGGTTGTGAACTTCATAATCGCCATTTGCTTGAACATTTTGATTGATAATGAATTTAGACATAGTTCTTACTCCTCACAAATAGTAGTGATCGGAGGTAGATCTAGGCCGTGTTGTAGAGTCGAGTATGACAAAAATTTAAAATGTTGTGCTATCATTTGGATAGTCCTTATTTAAGTAGTAATAGCTTTGAAAATGGACAAAAGCAGGTATGAAGTTTGGTCACGGAATACCTGCTTTTTTTTATGCCTTTTCATAAATTAAGATATATTTGTCCAAAATCCTTGTCAAACATTATTTTTATTTAAATAAAATTTTACTATCAATCTTATCTAAGTATTAAGGGTAGTGATTTTTTAAATGAATATTAAGTATTCCTAATTAAGATTTGTTATGATACAACTCTTACATAG # Right flank : AACATTCAAAGAGGCTCATCGAATCCAATCGAATTTTATCATCGCTCAGATGATTCAAAATTTCTCTTTCAAAATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCTGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTATTGATGCTAGATGAATGGG # Questionable array : NO Score: 5.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 361393-358602 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJRL010000009.1 Acinetobacter baumannii strain 172830 NODE_9_length_418071_cov_100.862663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 361392 30 93.3 30 ............................GC CAAAAGTAACCTCGAATGAGCGAACCATGT 361332 30 93.3 30 ............................AG AAAGGTCAGGCGCGACAAGTCGCTGCCCGC 361272 30 96.7 30 .............................A TTTATGGGTCTATGACGGTTCCCTTTTCTC 361212 30 93.3 30 ............................AA CAGCAGCACCCACCCCAAAACGTTGAACAT 361152 30 93.3 30 ............................AG TAATAATACAGAAATCACATATGAATACAA 361092 30 100.0 30 .............................. CTTTCGGTTGTGTTTCTGATTCATCTACCA 361032 30 100.0 30 .............................. ACGGTGATTGCTATCAACCGCCTAACGATG 360972 30 96.7 30 .............................A TTGGCGGTGGTGGTGGCGGAACTACAGATG 360912 30 100.0 30 .............................. AATGAAAAATACAGAGACCGTAAGGTGACT 360852 30 93.3 30 ............................GC CAACTTTACCGTTACCCAAATAAGCAGCAA 360792 30 96.7 30 .............................C AATCTTTATCGTCTCGAGAACTAGCAGAGA 360732 30 93.3 30 ............................AG TAACCAAAGTTATCATTTTATAAACTCCAA 360672 30 93.3 30 ............................CG CAACAGTAGTTGCATTAGCTGATTGAAAGA 360612 30 93.3 30 ............................AC AAGTTAGAGCTATTAGAAAGAATTATTTAA 360552 30 100.0 30 .............................. TCGGGGTGGTTTTATTTTGCCTAAATTAAT 360492 30 93.3 30 ............................AC ATGAAAAACTAGCTTCCACGACATCAATCC 360432 30 93.3 30 ...........T.................C TTGCTGTGCATAAGCCTGTAAGTTATTTAA 360372 30 93.3 30 ............................AG TTGCCCGGATCACGACGATCATTAGAATAA 360312 30 100.0 30 .............................. GGAGTCATCAATAAGAAACAATCCATTTAA 360252 30 96.7 30 ............................A. CTAATCGATGGTGAAGATTTTGAACAAGAT 360192 30 96.7 30 ............................G. TATCTCAATGGTGTGACTTGTTAGCACTAG 360132 30 100.0 30 .............................. AATGCAATTCGGAGCATGGCGTACCGAAGA 360072 30 100.0 30 .............................. GTGTGGACTCCTCAATCAGCATCTTGAAAT 360012 30 96.7 30 ............................A. CTTTTTGCTTATAGTAACAAGTAGCAGAGT 359952 30 93.3 30 ............................GA ACTGCAATGCTGTGAGTAACGAACCTTGAT 359892 30 93.3 30 ............................AC TTACCAGACACAGCACCTTCTTGAAGCATC 359832 30 96.7 30 ............................A. GACGGTTAGTTACTTTTGATGTACCGCCAC 359772 30 93.3 30 ............................AC TAACTCACCGCGATAAATAGACGCGATACC 359712 30 93.3 30 ............................AG AGACACAGAAAAAGAATGTGAACAATGGGC 359652 30 96.7 30 ............................G. CGATTAAATCAGTCAAAGGACCCTAAGCCA 359592 30 96.7 30 .............................C AAACTCACAACCTAGAAAAGATTGCTAAGG 359532 30 96.7 30 ............................A. GAAAAAGCCCCATTCGTTGTGAATAGGGCT 359472 30 93.3 31 ............................AC CAAAAGCTTTACGGTAAGACACGTTATGCAG 359411 30 96.7 30 .............................A CGAAAACAAAAGATACTCATGCACCAGAGA 359351 30 90.0 30 ...............T............AA CAGCATTTACACCAGCAAACTTTAAAGCAG 359291 30 96.7 30 .............................G TTACATGCCCAATTGGTTGGCGCATGTCAT 359231 30 93.3 30 ............................GG ACATGTGAGCTTCACACCATCCTTCAGGCA 359171 30 100.0 30 .............................. GTTGCGGCTCTCGCATGATGTGGTTTGATC 359111 30 93.3 30 ............................AA CTGAAAAGATGTTGAGTGCAGGTTGTTCTT 359051 30 100.0 30 .............................. GATGCTGAAAACTTCACAGCAGGCAATCCA 358991 30 96.7 30 .............................G TAAAGGATGTGAGGAACGTCGTGAGTGGAT 358931 30 93.3 30 ............................AA CTGACTAGTGATTTGAGGAATGTGCTCACC 358871 30 93.3 30 ............................CA AACACAGCATTATTGGGCCTTCAATACGAT 358811 30 93.3 30 ............................GA TGCAGGCGGAGTCTGCTATGCGACTGGTAC 358751 30 90.0 30 .................T..........AA ATAACCACGGTTATGGTAAGTCACTTTTAC 358691 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 358631 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 47 30 94.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAATAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //