Array 1 125896-123471 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGDN01000065.1 Bacteroides fragilis str. 3397 N2 gbf3397N2.contig.64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 125895 35 100.0 33 ................................... ATCCTTTGTTTATTATAATTTCGATTATTAACC 125827 35 100.0 37 ................................... TATTCTTTGATGCCGTGATTTATCACACGATTAAACC 125755 35 100.0 36 ................................... AGTAAAAAATTCCTAAAAACAGAACTATGGAAAATT 125684 35 100.0 37 ................................... CCACGATTTATGTCGAGGTCGTAAAGAGAGAAGGAAT 125612 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 125543 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 125474 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 125405 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 125336 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 125267 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 125198 35 100.0 34 ................................... ACGGAATTTTTATGATAGACAATGCTCCAAAAGT 125129 35 100.0 37 ................................... TAAAAAATTAACTCCGTATTTGGGAAATGCCAAAACG 125057 35 100.0 34 ................................... AACCTTATCCAAGAAAAAAGAAATCGCTGCTGGT 124988 35 100.0 37 ................................... TTCCTATTTCGGCAACGTTCAATTGAAGTGGGAACTT 124916 35 100.0 36 ................................... AGAAAATAAGGAGCGAATTGCAGAGGTTGGCTGAAA 124845 35 100.0 36 ................................... ATATTTTGACGTGGATTTGGAATGCAATCATATGGA 124774 35 100.0 38 ................................... GCAGCTTAATAGAAAATGTGAATGATCTTGGTTTTGAT 124701 35 100.0 35 ................................... TTCAGTCGGTATCAAATGGAGATTAAAATCCAAAT 124631 35 100.0 36 ................................... TTTGCGAGACGAGATAAAGAAATTTATTAATCAGGT 124560 35 100.0 34 ................................... AAACTACAATATCGTTCTAGCTGCAAGCGTAAGC 124491 35 100.0 37 ................................... AAATCAGTACAGCTAAAAATTGAGCTAAAACTGGTTT 124419 35 100.0 37 ................................... TTCATTCTCCGTGGGGAATATTTATATCACTATACGG 124347 35 100.0 35 ................................... ATATATAATGCTGATTGTAGCGATAGCTATGATCG 124277 35 100.0 34 ................................... TTTCTCCGAGTAGCGCAATCAAAGCCCTAAACAA 124208 35 100.0 35 ................................... AGGCCTTGAAACAAAAACAAGCCGCTTGTTCACAC 124138 35 100.0 32 ................................... ATTGCTGAGTTTAGCGCTGGATACTGCCATGT 124071 35 100.0 36 ................................... ATAGATTTCACATACGGCAATACCGCTGACGCAGTT 124000 35 100.0 34 ................................... ACAATACTTACAATTATGACAACTTCAGTTAAAA 123931 35 100.0 37 ................................... ACTACACTGTCTGAAGACGGTATCGTTGATTTCCACT 123859 35 100.0 37 ................................... AACAAATATCAATGCGCAAGAAAATACCGGCGCAAGT 123787 35 100.0 33 ................................... GAATTGAAGACCAGAAAGAAGCTTACAGTGTGA 123719 35 100.0 37 ................................... CGCTGATAGACGTTCAGGTTCGCACCGATGAAGTTCA 123647 35 100.0 37 ................................... CATATGATACATTTGGAAAGTTTCTCAAAATCTTTTT 123575 35 100.0 35 ................................... GATCAAGAAAACCTGCCGGAAGTTCTGTTGTTTCT 123505 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================== ================== 35 35 100.0 35 GTCTTAATCCTTATTATACTGGAATACATCTACAT # Left flank : TAATATCCAAAGCATCTACAATGTAACTTACAACACGAACAAGATGGTTGGGAGATATTTTTTCCGATAAACGAACCGGAAAAGAACATTTTGGCTGGAGGTTAACTCTCTAAATACTATCTTAACTATTACTGTTAATTTTTCACAACGGTAATATGAGGCTTTTCACCGAAATAAACAATGGTAAAAGGGGCTATCCGACTTTTGGGGGGCACTTTGCTTTTTGGACAGCCCCGTAGTATTATCGCCTTTGTGTATTTTTGGTAAGCTATTCCACAGCTTATTAAAATAGTTACCAATAAATTAGTTCTGCCTCTCTTCTTCTTTTCCTGCTTATTGATCATTTTCCCAATGTTAAAAGCAATACCGAAGTCCATGACGATCTTATCCAAGCCGTTATGTCTGAACTTCTCCCCTTATTCTATTTAATGTAGTTAAATTTTTATATTGGAATACATCTACATGCTAATAAGGAAAGTTTGCAGTATTTCTGGGCATTG # Right flank : ATATTGATAATCAGATTATTATAAAATATGTATTCTATCTGTATAAATATATAATAACTTATTATTCAGTTAGATAGATGAAGTGTTGAACTGATTTTCGCAAATGTACTCTTTTTTTCTGTAATTTAAATAAATAATTTGTAGAATATAGAGATATTTAATTGATTATCACTTTGATATGATCGATTCATTATTCGCAAATGCCTGCTTCATTTGTTATATTATAGCCTATTTCGAAAATAAGATTAATCTTATATTTATAATTATCAGATAATAAGTGTATTATGTCAAAGAACGAATTGCTTATTTGTTTTTTTTCGCAAATGATTTACTAATATACAAAAAAGCTAGTTCTTTCGTAGCTTTTATACATTATATATTATTTTTCATTTAAAAGAATAAGCAGAAAATCAATGAATTAAACAAATTCTGATTTTCGCAAGAGGTTTAGACTATTTCGACGGTTTTAATTATCTTTTTTCGTATAGGTTGATATATAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTATACTGGAATACATCTACAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //