Array 1 557079-564045 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKLU01000008.1 Corallococcus sp. Z5C101001 contig8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================================================================== ================== 557079 37 100.0 35 ..................................... TTGAAGAGAAGCTGCTTCTGCGCGGGCGACACGAG 557151 37 100.0 32 ..................................... GACCCCGCCTCGCCCTGAGCCGCATCAAGGCC 557220 37 100.0 38 ..................................... CATTTCCAGGCTCAGCAGCTCCACGGTCCCGACCGCCG 557295 37 100.0 38 ..................................... CTTTGCCGCGTCACGTCCGCCCCCATTGCCTGCGGGCG 557370 37 100.0 37 ..................................... TTCGGAGGAGCCATCCCGCTCGCGGGGTTCGCGTTCA 557444 37 100.0 33 ..................................... CACGCCGGAATGGGCGTCACGCGGTCGTACTTC 557514 37 100.0 34 ..................................... ATCAGCTCGTTTCGTCGAGGTTGCGCCCGTGGTG 557585 37 100.0 34 ..................................... ATGTTCGCGTCGCCAGAAACGCCGGCGAGGTCGA 557656 37 100.0 35 ..................................... CCACAGGTGCGGTGCTTCGTGCGGTTCGCCCCTCC 557728 37 100.0 34 ..................................... CCGGCGGAAGTAGCGGTGGACGTCTCCCGGTGCG 557799 37 100.0 39 ..................................... CTGGCATGGAGACGCGGCCCTTCGTCTTTCACGTGCCCG 557875 37 100.0 36 ..................................... ATCCCGTCACCCGCCGCAGCAACGCCAGCGTGCGGC 557948 37 100.0 36 ..................................... TTCGTGGTGCCCTTGTCGCCGTCCTGCTGGTGAATG 558021 37 100.0 33 ..................................... ATGGCGTCCGCCAGCATCGCCTTGGCCCGGGTG 558091 37 100.0 34 ..................................... CAGGTCGGGATGGGCGTCACGCGGTCGTACTTCG 558162 37 100.0 34 ..................................... GTGGCCATGCGTACCATGGCCTGTAGACGGAGTT 558233 37 100.0 33 ..................................... CTGGGTCCTCCGAGGCGCCGCCCGCGCCCGGTG 558303 37 100.0 35 ..................................... TTCCCGGCGGGTGGCGGGACGCCGGACCTGCAGGT 558375 37 100.0 35 ..................................... GACTACGAGGAAGGTCCCCGGCAGTGCCGCAGGCG 558447 37 100.0 33 ..................................... CTTCACCCAGAGCCGGTCCCCGGTCTGGCCGTA 558517 37 100.0 35 ..................................... TCGGTCTCGCTCTGGTTGTAATACTGCTGCTGCTG 558589 37 100.0 38 ..................................... GCATGCCGCCCAGTAGGCCGGGATGCGGCTGTTCGTGC 558664 37 100.0 37 ..................................... AACGCTCCCGTCAGGGCAGACGTAGGCGGTATATGAG 558738 37 100.0 37 ..................................... ATCCAGCCCTGGTCCCTGCTCCACGCCCTGGACAGCA 558812 37 100.0 36 ..................................... ATGTAGTGGTAGCCACTCCCGCATGTGCAATCCCAT 558885 37 100.0 33 ..................................... GACTTCTCGCGGCTCATGAGTGAGCAGGTGACG 558955 37 97.3 36 .................A................... TCTTTGCGCGGGGTGCCCTGTGGCGGAGCTGGACGG 559028 37 100.0 33 ..................................... TCCAGCCACACGTCCAGCGCGCTCCGGTGCTCC 559098 37 97.3 35 .....................A............... CTCGCGCTGCGGCGCACCCGCGATAACGCGGGGTG 559170 37 97.3 34 ..............................C...... TTGAAGAAGGCCTTCCGCCGCTCGCGCGGTGTTG 559241 37 100.0 37 ..................................... GTCATCGCGCGCCTCGCGTAGTCCTCACGCCCCAACA 559315 37 100.0 34 ..................................... ATCACCTGGGCACGCAGACCGCCGAGGGCCCCAC 559386 37 100.0 34 ..................................... ACTTGGCACCGTTTGTGCTCCCCCGCCCAACTCG 559457 37 100.0 36 ..................................... CTCCGGCTGCGGCTGGCGCCTGCCCGGGGCGCTCCC 559530 37 100.0 36 ..................................... TCGTCGATGGACCCCACGCGCGACGACACCATCCCC 559603 37 100.0 37 ..................................... TGTCTCGGTCTGGGGGGCATCAGTCGGTCCTGGTCAG 559677 37 100.0 33 ..................................... CCGACCTCGCGCCGCACGCGTCCGCGCCCGGCG 559747 37 100.0 35 ..................................... TTCGCCGCGCGCGCCGCCCACACCGCACGGAGCGC 559819 37 100.0 35 ..................................... GAGCGCACCAGTCATACATGCGGCGCTCTTTTACG 559891 37 100.0 37 ..................................... GCGCTCGAATTCAGCCAGTCGAAATGATCTCCACGTG 559965 37 100.0 37 ..................................... GACGGCCAGTTGCAGCGTCCGGATCAGCTCCCGGGGC 560039 37 100.0 36 ..................................... CAGGCCGTGACGGTGGCGGCGCTCATGTCCCTCCGG 560112 37 100.0 32 ..................................... GACTGCGCAGCGGCGAGCCTGAAGATCCTCCG 560181 37 100.0 34 ..................................... GTCCAGTCCCGCCAGTCGTGGCGAAGATGTTCGT 560252 37 100.0 34 ..................................... GAGGCTGAGCGCGCAGCCGCCCAGGAGGCCCGCG 560323 37 100.0 38 ..................................... AAGGTGCAGGGGCTGCAACGCGTGCACGACGCGCTGGC 560398 37 100.0 35 ..................................... TCGACAGCAGCGTGGACGGTGACACGCAGGTGGGC 560470 37 97.3 36 .G................................... AGTAACGAGACGAGGGGGCTGCGCGGCGCCCCCGTC 560543 37 97.3 35 .G................................... TCTGTGCGACCGTACCAAGTTTCTCTGTGCGCCCA 560615 37 97.3 35 ...................T................. TCCGAGGTCGCGCCCTCGTCGGAGTCGGGGGCCGT 560687 37 97.3 36 ...................T................. GGAGTCGTGGGCCGGGCGCCCGGCCCACGCGGGGCA 560760 37 97.3 34 ...................T................. TGCGCGAGGTGGTGAAGGTCTCGGAGGCTCGTGC 560831 37 97.3 39 ...................T................. GAGGACGCCATCCGCGACCTTCCACTGCCCGGGGAGGAG 560907 37 100.0 35 ..................................... ACCCCTGCACTGTCGCCCGCCTCGTTCAGCGCGCG 560979 37 94.6 42 .G.................T................. GCCTTCGCTGCGCGGAGTACGCAGAGGAGGAGGCAGGTCACG 561058 37 97.3 35 ...................T................. TGTCGCCAGTACGTCTCGGTGCGCCCACAGGTGAA 561130 37 97.3 37 ...................T................. TCCGGGGCCTACATCAGCTACACGCACACGGTGCTGG 561204 37 97.3 37 ...................T................. ATGGTCGACAGCGCGGGGGGCTCACCTTCCGCCACCC 561278 37 97.3 36 ...................T................. ACCTGGACAACTCCTCCATGGCCTGCCCCGACACCC 561351 37 100.0 36 ..................................... ATCGCCGTGCGAAGGTTCTCCATAGGATCACGCGTC 561424 37 100.0 34 ..................................... CTTCAACTCGTACCGAATCACTCGGTTGCGCATG 561495 37 100.0 35 ..................................... CAAGCCACGATGAGCGCGAAGATGAGCATCACCAC 561567 37 100.0 35 ..................................... TCATGCTCGCCACTGTCGTCATAGACTGCGTGCAT 561639 37 100.0 35 ..................................... ACCAGCAGCCGCCAGGAGTTTTCCCCCTCCACCTC 561711 37 100.0 36 ..................................... GCGCGGACGAGGCGATCCTCGACGCGCCGGGTTACT 561784 37 100.0 34 ..................................... GCTGCGGTTCGCGTCGCTGCCCACCACCGGCAAG 561855 37 100.0 38 ..................................... CCCCAAGCGCTTCGCGGTGCCCGCCGTCGTCCCCCAGG 561930 37 100.0 36 ..................................... GCGCGACGGACCGCGCGTGGGAGCTAGGGGAGCGTC 562003 37 97.3 35 .................A................... ATGCTGGTGTCCTCGGAGCGCTCATAGGTGGGGCG 562075 37 100.0 37 ..................................... TCCTTCAGCTCCTGGGCATAGGCGACATCGAAGAGAG 562149 37 100.0 34 ..................................... CCGGCCTCCACGTCACGGCGCCGCGTCGTCGCCG 562220 37 100.0 35 ..................................... CAGCGACTCGGGAGCGCGCCGGAAAGGCTGACGCT 562292 37 97.3 37 ................A.................... GCTGGGAAATGCGAGGCCCAGGAGCGTCTCCTGGACC 562366 37 97.3 37 .G................................... CATGTTGCTTTTGACCGTGGTGATTCAGCGCCCCGAC 562440 37 97.3 37 .G................................... CACCAGCAACACCGGGATTGTGGCGCTGACGGCGCGG 562514 37 100.0 34 ..................................... ACCCCGTGGTCGGTGAACGGAGCGGGGCCGATCG 562585 37 100.0 34 ..................................... AGCATCGCCCCCGGGTGATCACCTGTCCCCGGGA 562656 37 100.0 35 ..................................... CTCCCTATCCAATCGAGGTTGTCCATGCAGAGCGC 562728 37 100.0 33 ..................................... CCCGCAAGCACGAGCCCTGCGATGTGACGACTG 562798 37 100.0 35 ..................................... CACGCGGGCACCAACGGCCTGCGCGGGCCCGTCGT 562870 37 100.0 36 ..................................... CACCGCTTGGACCTCACCGTGCCCTCGCCTGCGGAG 562943 37 100.0 34 ..................................... CTCTGGCACGTCGTACGTGCCGGGCGCCTTCCGC 563014 36 91.9 36 ..-.AG............................... CTCTGGAGGGACAGGCACGGGACATGGAGCACCTTG 563086 37 100.0 34 ..................................... CTCGCCTCGTGGAAGTTCAAGGCGGCGCTGGTGG 563157 37 100.0 37 ..................................... GCGCTCCGCGGCGTCTGGCCGGTGGGCCCGCCTCCTG 563231 37 100.0 34 ..................................... AGCAGTTGAAGGAGCAGCGCGACAGCGTGACGGC 563302 37 100.0 33 ..................................... ATGGCCTCTGCGGCGGTGAAGCCGGCCTGGGCG 563372 37 100.0 37 ..................................... GGGACCTACTGGCGTGAGAGTGGCATCAAGGTGGCCT 563446 37 97.3 35 .................A................... TTCGCCCAGTCCTGGGCATTCGCTTGGGAAGGACG 563518 37 100.0 34 ..................................... TTGAGCTTTGCCACTTCACCGACGAGGCGGTGAT 563589 37 100.0 34 ..................................... TTGAGCTTCGCCACTTCAGCCGTGAGGCGGTGAT 563660 37 100.0 34 ..................................... GGGCCGTGCCCGGTCAGGAGTCCCGCCAGTGGCG 563731 37 100.0 37 ..................................... AAGAAGCTCAACACGTACACCCTCGCGGGCCCTGGCA 563805 37 100.0 35 ..................................... TCAAGTACGGCGTCTCGTTTACGAACGCGGAGCAG 563877 36 75.7 95 ....T..........-.....TG........G.CGTG GCGTGGCGTGGCGTGGCGTGGCGTGGCGTGGCGTGGCGTGGCGTGGCGTGGATTGAAACGGCGTTCGGTCTTTGCGTGTCGCAGCCATAGGCAAG C [563906] 564009 37 81.1 0 .......T....AAT......C...AA.......... | ========== ====== ====== ====== ===================================== =============================================================================================== ================== 96 37 98.9 36 GTCGCTCCGCTCTCCGGGGCGGAGCGTGGGTTGAAAC # Left flank : TCCGCCCTTCAGGATGAGGTGAGGCGATGCTGGTGCTGGTCTGTTACGACGTGGCGAACGACGACGCAGCGGGGGCCCGGCGGTTGAGGAGGATCGCGGAGGCGTGCAAGGACCGCGGGGTGCGGGTGCAGTATTCGTTGTTCGAGTGCCGCGTCGGGAAGCGTGAGTGGGTGGCTTTGCGCCAGCGGTTGTTGGATGAGGCGGACCTGGCGAAGGACAGCCTGCGTTTCTATTTTCTGCACGCGGATGAAGAGACTCGATGTGAGCATCACGGGGTTCGACCCCCGATGGATCCCACAGGAACCCTCATCGTTTGAGGGGCAGCGCGAACCCTTCACAGTGGAGGGCTCCCCTGAGGTTCGCGCTCGGAAAATTCCGAGGAAGAACAGGGGGTTGTTGGGAGGGGATGGCTTCGCGAGGGAGGTGGAATGGTGGCGATGGATGGGTTCGCGGAAAGCTTCGAATTTTCTTTGGAAACTTCATACGTTAGAGCCAGTAGG # Right flank : CTCTCGACGATTTTGAATCTAGCCGGTCAGCGTGGATTCACCTGAGTCCCTGCGGTATGCGAGCGCGGAACGAATCAAATGGGTCATCACCGCGGACGGCCAGCTGAGAGTCATTCCACATACATGGCAGGGGGTTGAGCTTTCTCATGCGGTCGCGAGCGGAGGTCGCCCCGTGTTGGCTGCCGGTGAAGCAGAACTCTCGATTCACGGCACCACTCGCTTCGGAATCCAGTTGACGTCTCGCAGCGGCCATTATCTGAACGGGGCTTCCCAGGCCGCGAGCGAGAGTGTCCTGGAGCTCGGTCGGCGGGCATTTGCCAGATTTGGAATCACGTTCGCTCCGTGACGGTAACTATGGAAACGAAGACTCCTCTTCTGCAAACCGTCCTGAAGTGGCCGCTCCCGCAGGTGCGAGCCTGGCTCGACGGGCTTTCTATCGGCGAGCCAGTGGGCGGCGAGAACTTCAATTGGGATGGATTCGCCTTCACCGCCGCAGCCCG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCGCTCTCCGGGGCGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //