Array 1 799-2286 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZTI01000024.1 Neisseria meningitidis strain Neisseria meningitidis isolate B100, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 799 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 865 36 100.0 30 .................................... TCAGGGCTATCGGGGCTGACCGGTTTATTG 931 36 100.0 30 .................................... GAGCATTGACACTATTTGTATGGCGTTAAG 997 36 100.0 30 .................................... ATAGAACCTATGGCTGCTACGGCGTTGACA 1063 36 97.2 30 ............A....................... TTTTGTGGAGTTTTGTTATGAGTGAGGGCA 1129 36 100.0 30 .................................... AAGCATTGACGATATTTGTGTGGCGTTGCA 1195 36 100.0 30 .................................... AAACGCCGGTAGGTTTCGTCTGTCTCCATA 1261 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCGTA 1327 36 100.0 30 .................................... GGAAGAGCGGCATCTGAATGCGGAAGAAGA 1393 36 100.0 30 .................................... CATCAAATCATCCGCCGCGATTCGATCGCA 1459 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 1525 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 1591 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 1657 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 1723 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 1789 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 1855 36 100.0 30 .................................... ACCAAGATATATCAAAATTGTAGATGAAAA 1921 36 100.0 30 .................................... TGCGGAAAGCCTCCATGCTTTGCAGCACTG 1987 36 100.0 30 .................................... AATTTGCGCCTTGCTGCATTGTGTAGTTTG 2053 36 100.0 30 .................................... TTCTTCCCGATTGAGGTTGCTAGTTTTGTC 2119 36 100.0 30 .................................... TTTTTCGATTTTTTATATTGAGCGTTTTTG 2185 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 2251 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCCGGAAGAAGGTGCTCATGAGAAATCTCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //