Array 1 101272-100813 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JODN01000038.1 Streptomyces ruber strain NRRL B-1661 contig38.1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	==============================	================================	==================
    101271	    29	  86.7	    32	C..........-..G..........A....	GTCTTGAGCCGCGGCTCGTCGGCCAGGATGTT	G [101257]
    101209	    30	 100.0	    32	..............................	GGCCGTATCCAGGTCCGTGCCAACCCGGACGA	
    101147	    29	  86.7	    32	...........-..G......A....C...	AGGTGCCACTTCTTGTCCGGCGGGCAGGTGGC	
    101086	    29	  90.0	    32	...........-A.G...............	GTTAAGGACTTCGTCAAGGGGCTGATCCCGGG	
    101025	    30	  93.3	    32	.C...........................G	ATGACGCCCTTCGAGATGCTGGGCCGGATCGG	
    100963	    29	  90.0	    32	...........-.TG...............	CCGTTGCCGTAGTGCCCGACATAACACTCGGC	
    100902	    29	  83.3	    32	...........A-.G..........T...A	CCCAACAAGCCGAAGGGCACCGCGTGGGAGTA	
    100841	    29	  76.7	     0	........T..-..AC..A..C...C....	|                               	
==========	======	======	======	==============================	================================	==================
         8	    30	  88.3	    32	GTGGTCCCCGCTGCCTGCGGGGGTGGTCCC	                                	       

# Left flank :   GCGGGAGTTCATCGGGCGGCACAACGGCCTCCCGGACGTCGTCCACGACCTGGCCTCCAGCCGGGCCTACCTCCAGGCGTACGCCGACAAGGCCGCCGCCGACACCGGCCGGATCTGCGGCATCCACCTGGACGGCGAGCTGGTCGGCGCGGTCATCCTGCGCACCATGGACGTGGCCAACGGCACCGCCGAGGCGGGCTGCTGGCTGGAGCCCGCGGCGGCCGGCAAGGGCCTGGTGACCCGGGCCGCCCGCACCCTCATCGACTGGGCCGTCGAGCACCGCGGCATCCACCGCGTGGACTGGTGGGTCTCCTCGGCCAACGCCCCCAGCATCGCCGTCGCCCGCCGCCTCGGCATGACCCGCGACGGCGTCCTCCGGGAGAGCCATCTGTACCGGGGGCAGCGGCACGACGAGGAGATCTGGTCGGTCCTCGCCCCGGAGTGGCGGGCGGCGAAGTCGGAGGCGGCGTCGGCGGGTTGAGCCCCGGGGCTGGGTTCCC
# Right flank :  CGAGCGGTTCGCCGAGCAGACCTCCGCACGAGGTGGTCCCCGCGCGCGGGGGTGATCCTGCCGGTAAGGGCACCAACCGCACGGCCTGCGTGTGGCCCCTGCGAACCGCAGGGGTGGCCCCGACCCGTGCAACGCCTGCACGGAGGTCAACATCTAGTCCCCGCACAGCGGGGGTGATCCCCGGCTCTGCACCTCCACGCTCAAGCGCGACGAGCGGTCCCCGCACCCGCGGGGCAACGGGCCGGGCCGGGCCGCACCGCCGACCGAGCACACAGGCGAACTGCCGCCACACACACCGAGCCGAGCCCGGCGACCTCCCCGGGACGGGGCCTCAGCACCGCCGCTCCGACCCCGGCCTCTCCGCCTCCACCACGCCGTCCACCTCGCCCTCGCCCCCGCCCTCGACCGCCACCTTCGCCGCCACCGAACCCACGGCGCCACCCCCCGAAGCCGCCGCGAGCCCCCCACCGCCCACCGGCCCCGGCCGCACTTCCGCCAAC

# Questionable array : NO	 Score: 5.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGGTCCCCGCTGCCTGCGGGGGTGGTCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,0] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.20,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [31.7-26.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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