Array 1 859785-859284 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051428.1 Paenibacillus sp. UniB2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 859784 33 97.0 35 ..............C.................. CACCCGTTCCCGCCAATTGGGCGATGACTGGCACC 859716 33 100.0 34 ................................. TGCCGTATCGGCTGGACGACATCACGACGCTATT 859649 33 100.0 33 ................................. CGCTGGGCGTGTACAAAAAGCGGCCCGGTGGCG 859583 33 100.0 34 ................................. TGGGATGCGAAAATGCAGAACAAGAAAACCTATG 859516 33 100.0 30 ................................. AATACTTCTTCGCGGTCGGCGCGGGTGCCG 859453 33 66.7 36 .CT..GTCG.T.TCC.G................ GCGCTGAGGAAGGCCATCTTAGCTCACCGTCACTTT 859384 33 100.0 36 ................................. TTGGCAGGCGGTCAATGACTCGGAATTTGCAACGTG 859315 32 78.8 0 .......-..A......TGTT.......T.... | ========== ====== ====== ====== ================================= ==================================== ================== 8 33 92.8 34 GTCGCTCTCCGCATGGAGAGCGTGGATTGAAAC # Left flank : TCCGTTTGCTTCTCAGTCGATCCCAGATATGGAGGAAGCCGTCCTTCCCCTTGCGCTTCGTATATGGCCCGCATCGTAAATGTTTGGATATGATCGAACATGCACCTTCCTCCTGCCTTTACCTTCAGTCGTTGCTAAATAGGTGAGCAGGTCTATAGCAGCATACCGAAAGATGCCGGTAGACCTACATCGAAAATTCCCTATGCGAACAAATATTTTTGCTGGATTTTCACTAAGACTGGAAAATTTTGATGAGTATCGTCCGTTTTTTCCGAATTTCATTGGCAGAAAATTGAAGATGAATTATGATTATACGTAAAGAATGTAGCTGGTGCGAATGCCAAGCTCCCATGAAAACCCCGGGGGATTCGCACCTCGAAATTTGTCGAAATTGATTCAAAATCATAGTCTCAAATTTATATCAAGTATTATTATATATCTATTTAGTTGGAAATAGAGTGTTTTTCATACGAGAAAAGTATGAAAGCCTTCTTTTCGCC # Right flank : ATCGGTCGCTCCCTATCGAGAGGCATAAATTCAACTCCTACTCCACCCTCAGTTTCCGTCTACCCCAGAAAACAAAAAAAAGGACAACCCGGCACCAAGCCGAGTTGTCCTTTTTTTTATCTTCCCTCCCGCCTCCAATCAGGGAGCGGCGGGAGCCTCCCGCTCAATGCGTGTACGTATAATGCGGCGAATCGTACTGCGGGCCGCCTTTCTCGTACGTGAACCACAGCTCGATGGCCTGCCCGGAGGTCAGCCCCTGGATCGTGTGCGTCCAGGCCGAGCCGTTCTTGACCATGCGCACGTTCTGCTGGTTCGCGCCGTTCACGAGATAGTGGACATCCACGTAAGCCGCTGCGGTTTTGGGCGTGAACGAGATCGACTCCGAGGAGCCGCTCTTCGTTACGGTAGCCGTGAAGTCCGCATGCGTGTACGTCTGACCTGCCGGAGGGGTCGGAGTCGGTGTTGGCGTGGCCGTCGGGGTTGGCGTCGGCGTTGGAGTA # Questionable array : NO Score: 8.90 # Score Detail : 1:0, 2:3, 3:3, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGCATGGAGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.30,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 862232-861175 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051428.1 Paenibacillus sp. UniB2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 862231 33 100.0 36 ................................. CCAGCGAATTGCATAAAAAAAAGCCCGCCCAAAAAT 862162 33 100.0 34 ................................. CGACTGACGGCCGTCGATCAAGTCGGAAACGAGA 862095 33 100.0 37 ................................. TCAACGCTCGCGCCGTTTGTGCTGCTCGGCGTGGCGA 862025 33 100.0 34 ................................. TGACGGCCAAAGGAAAGCGAAACGTAAGAGAGTT 861958 33 100.0 35 ................................. CGCAAAATGGGCCGCTGAGATGGACAAGGGGGATT 861890 33 100.0 35 ................................. CATTTTTTTTTTAAGATTGGAACGAACGAATTTTC 861822 33 100.0 35 ................................. CGACTGACGGCCGTCGATCAAGTCGGAAACGAGAG 861754 33 100.0 34 ................................. CTCCAATTCTTGCCCGGCGTTCACCCGCTCTTTA 861687 33 100.0 35 ................................. ATATCATCCGCCTGCAGGTGCCAATGATCTTGAAC 861619 33 100.0 36 ................................. GCGCTCCGACAGCCGGGACAAGGCATCCGTGATCTG 861550 33 100.0 36 ................................. CTGTCCGTTAAATGCTCCCACAAGGTTATTGATGAG 861481 33 97.0 34 T................................ ATAGGAGCGCACAAGCACCGGCACATTGACCGAT 861414 33 100.0 37 ................................. CATGCTCGTGTCCCAGTTCGTTTCCCGCACGGCTTCC 861344 33 100.0 36 ................................. ACGCTGATTTGATCCAGGCTCGGCGGCGTGATCGTA 861275 33 97.0 35 ........................A........ ATCGCCGAGGTGGTGTTCATGCGGATCTGCCGGCG 861207 33 75.8 0 ..T.........T..A..T...C.A.C....C. | ========== ====== ====== ====== ================================= ===================================== ================== 16 33 98.1 35 GTCGCTCCCCGCATGGGGAGCGTGGATTGAAAC # Left flank : GGACTATTACGTTTACAACAAGATGGCTCCGATCGAGCTCGGCGCCGCTCCGACGCTCGTCGACGGCAAGACGTACGTGCCGCTGCATTTCTTCCGCGACGTCATGATGCTGAACAACGCCTACGTGTTCGAAGGCCAGATCGACATCAACAACCAGGAGAAGATGGAGTAGATTTCTCTTCTATCTTCTATCTTCTAGCTGAAAGAAATTGGTGAGAACAGGGGCTGTCCCAGACGTCATTTATTGGCGCGAGGGGCGGCCCCTGCTTGTTGGCAGAAAAATGAAGATGAAGTATAGTTGAAACGAGAGCAGCGACTTGGTGCGAATGCCAAGCTCCCATGAAAACCCTGGGAGATTCGCACCTCGAAACTTGTCGAAAACGCTCGGAAATCACGTGCGTCAGTACTTGTCAAGAAATAAATTATACCTTTTGAATTAGCTTGGATGGAGGAAATAGATGTTTTCATACCTACCGGGTATGAAAGCGTATTTTTTCGCT # Right flank : ATACAGAGCTCCCTAATTGCGAAGCTCTGTATCCCCAATAGGAAGCGTGTGGATTGAAAACCTTAAACAAGTTAATATAAATAAGACGATAATTGACGTTCTCCGAGGAAATAAGGTGTATAAAACCTAAGAGAAAAGCGCAGCTTATGAAGCTGGAGGTTGTAGATAATGAAGTTTCCCAAAGATTATTTAGACGACCTTTTGGTACGGATGACCTATCACTCATCTGCCATTGAAAACAACACCATTACGTTAAGTGAAACCATCTCCATTCTTCTTCATCATACGATACCGAACAAAGTGTCTGTACGTGAGTTTTATGAAGTTGAGAACCATCGGATGGCTTTTAACTTTATTGTCGAAAATACGGACCGTGAATTGTCTATCTCATTGATTCACGATGTTCATTCCCTTCTGATGGATCGGATCCATCATGAGCGCGGACGGTTTAAAACTCATGAAAATGCCATTGTAGGAGCAACGTTTCAAACCGCGTCTGC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCATGGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.40,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 4508260-4506631 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051428.1 Paenibacillus sp. UniB2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================================================================================== ================== 4508259 32 100.0 36 ................................ GGCGTGATCTCGACCCGCGCGGGCGATCACTGGCGA 4508191 32 100.0 35 ................................ GCCCTGGTGAAGCTTGTGTCGGAGCGGCCCCTGAT 4508124 32 100.0 34 ................................ TGCTGCGCCATCGCCTGTTGTAACGCCTGCTGCA 4508058 32 96.9 35 ........G....................... CTCCAGGACATGGAGGCAATCATCATCGATGACAT 4507991 32 100.0 36 ................................ GCCAACCAAAGCTCCGAAAAACTGGCTGCGACCTGC 4507923 32 100.0 35 ................................ TCCTCGTACCCCTTGACCATCGCACTGAGCGATTC 4507856 32 100.0 34 ................................ TTGGCGGGATGTTGGTCATCAGCTTTTCGTAAAT 4507790 32 100.0 35 ................................ CGGGGCGTGGTTGGAAGTTGTCCAGCGTCGCCCCT 4507723 32 100.0 33 ................................ TGAAAGTCCGTTAGGTAGTGAACGGCCTCGGAC 4507658 32 100.0 33 ................................ CAGATTGAGACGGTTGATGATGGCCGCGCTCGG 4507593 32 100.0 35 ................................ ACCGAGGGTCGCATCTTCCACAGCACCAGCATGAC 4507526 32 96.9 34 .................A.............. TCACGCCGCCATCTGAAAGCGTCTTACGCGTCGT 4507460 32 100.0 35 ................................ CGCCATGTTTGCGCAGCTCTACCAAAAAGACATCC 4507393 30 90.6 34 ...........--..A................ TTTGCTCTGCCATATGAGATGCAAGTACAATGTG 4507329 32 100.0 36 ................................ TTGATGTACTCGCGCGCATGGTGCATGATCGCTCGC 4507261 32 100.0 34 ................................ AACGAACAGGACCTCGATTTTGGCGCCGTCAGTG 4507195 32 100.0 35 ................................ GGTTGTCCATTTGGGGGATGCTGCTGGAACTCATT 4507128 32 100.0 34 ................................ AATTTCGCGGGAAACAGATTAATTTTTCCTGTTG 4507062 32 100.0 34 ................................ TCTGGACTGATCTGGCCTAAGATAACATCATGAA 4506996 32 100.0 36 ................................ ATGCCATTTCACGCACCGATCAAGCATCTCTATGAC 4506928 32 100.0 34 ................................ CACGGCCTCCAGGTCGAGCGCGATGCTAGCCTCC 4506862 32 96.9 34 ..............A................. ATCAATGCGACGCTCCGGCAGATCATCGACGATT 4506796 32 96.9 101 ..............A................. AAAAACCATCATGCCAAGCGGTTCAAGGTGCTGACCATCGCTCCCCTGTGGGAGCATGGAGAAACAGCTCATACTACATGAATGTTAATATGTACGATCAA 4506663 32 84.4 0 ..........G.CC........AA........ | A [4506645] ========== ====== ====== ====== ================================ ===================================================================================================== ================== 24 32 98.4 38 GTCGCTCCCCCTGTGGGGGCGTGGATTGAAAC # Left flank : TTTGGAAGTAGGAAGGAGGGCGACGGCTGCTTGTTCTGATTACGTATGACGTGAGTACGACGACAGGAGAGGGACGAAGGAGGCTGTCCAAGGTGGCAAAGACGTGCCAGGATTACGGACAGCGGGTCCAGAACTCCGTGTTTGAGTGCATCGTAGATGCCGCGCAGTTCCGCCGTCTGAGGTTTGCCTTGGAGGAGCTGATTGATCCGGCGACGGACAGCTTGCGGTTTTATAACTTGGGTGACAAGTATAAGAGCAAGGTGGAGCATGTCGGTGCGAAAGCCTCGTATAACATGGATGGACCGCTGATTTTATAGGGTTGAAAGGTGGTGCGAATGGGAAGCTCCCATGAAATCCCCGGGGGATCCGCACCTCAGAATTTGTTGAAAGATGACGAAAAATCTATGAATTAATGAGTGTCAATTGTTTTTCTATGCTTCATAGGTATGATTAAAAGAAGCGTTTATATTAAAATAGGTATGAAAACGCTATTTTTTGTG # Right flank : AAGTCCATAATGAATCCCTTTATGTATGGAGAGCGTGGACGGAAACAGCAAATAGCCGCAGGCCCGTAGGCGTCGGCTATTTTTTGGTGGCTCCCCATCCAGGAAGAGAATCGATAGCGCAAGCTTCAGCTGCATCGCCAGCCAGCTTGCAGCTATCCGCTCTTGAGGCACTCGAACACATGACAATCCGCTCCCGGACCATACCCGTCCTTCACCTCGTGGACGGTCACCTGGCCGAAGCCGTTGGCATAAAGCCGCTGCTGAAACTCGTCCTTGGCATACAAACGAAGAGAGTAGTCCATTTGCTCCCGCTGCAGGGTAATTCCATCCCGGCGAAGCTCGTAAAGAAGCCGGGTGTGCAATACGCTCCGCTCGGGATCGTACTCGGTCCGCTTGCGCTGCATGATCGTCTCATCCTCGAACTCGTTCTTCAGGATGGACTCATCCGAGCTGGCCTCCGGTTCCCCTTGCTTGAGCACAATGGTGAGCAGCAGCTTCCC # Questionable array : NO Score: 8.94 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCCTGTGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //