Array 1 1497303-1496052 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LOSL02000001.1 Vibrio cholerae strain FDAARGOS_103 scf7180000000004_quiver_pilon, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
   1497302	    28	 100.0	    33	............................	TTTGATTAGTGATTTTATTGAAGTTTGCCAGGA 	
   1497241	    28	 100.0	    33	............................	TACAACTGTTCAATAGAGCAAACGTCTTTATTC 	
   1497180	    28	 100.0	    33	............................	CACCCAGCCACCCTGCTTATTAACGATGGTGCA 	
   1497119	    28	 100.0	    33	............................	GCAATTCGACCTACCTAAAACCCCTCACTTTGT 	
   1497058	    28	 100.0	    33	............................	TTTTAGGTCGGCATCTTCTCTTATGATCATACT 	
   1496997	    28	 100.0	    33	............................	TACTTTATCCTTTAGTAGTTCATACTCAACCTT 	
   1496936	    28	 100.0	    33	............................	TATGACAATCAACGCCCTCAGCGCTTGGTATCC 	
   1496875	    28	 100.0	    34	............................	CCAGACAACCTCAGGCGATCTTGAGGTTAAGCAG	
   1496813	    28	 100.0	    33	............................	TGCGATAAAAAAGGGGCTATCGAGGTAATTGAT 	
   1496752	    28	 100.0	    33	............................	CACTGCCGCCAAAGAGAGCATTCTGGCTAAAGC 	
   1496691	    28	 100.0	    33	............................	TCTGCACCACTTTCGGTGGCCCACTGGAAGATA 	
   1496630	    28	 100.0	    34	............................	TAGCGCTTCGATTACTTGAGCTTCAGTTAAAGCC	
   1496568	    28	 100.0	    33	............................	TGCTGATTTGCTGGTTGAGGTGAAGCAGTTGGT 	
   1496507	    28	 100.0	    33	............................	TTTAGAAAGTGGTTTTCTTTGATACTCGCGCGG 	
   1496446	    28	 100.0	    33	............................	TTCACTTGCTTTTGAGTTAGGAATGTTGCTTGC 	
   1496385	    28	 100.0	    33	............................	CTAAGGGCTTGCTGATGTATGCCTCGTTCTGCT 	
   1496324	    28	 100.0	    33	............................	CTTGGCATTCTCTCGCTCATGTTGCTGAGTGAG 	
   1496263	    28	 100.0	    33	............................	TTTGTTAGTAGCAATTTGAGGAATCAGGCGAAC 	
   1496202	    28	 100.0	    34	............................	CAAACCGCCGCTGATCACTTGGCGATTCACCAAA	
   1496140	    28	 100.0	    33	............................	CGCCGATTATTGATTCTGACCACTTCGCTGGAT 	
   1496079	    28	 100.0	     0	............................	|                                 	
==========	======	======	======	============================	==================================	==================
        21	    28	 100.0	    33	GTCTTCCCCACACAGGTGGGGGTGTTTC	                                  	       

# Left flank :   CTTTACAAAGAACACCTTTGTATTGATTTAGCTTTCTCACTTACCCGAGATATGGCAGGTCACTATGACAAACACAAGGTCTCTGATGCGTTTCGAAAACGGGTTATCAGCATGGATTTGTTACAACAAGTCTCCTCGGATATCAATGAGTTGATGGGAGGGGGAAATGCTCGTCGTACTAGCAAATGATTTACCCCCGGCAGTCAGAGGGCGTATGAAGCTATGGTTTGTTGAACCCAGAGCCAATGTGTTTGTTTCTGGCGTAAAAGATTCCGTTGCAGTGACGGTTGTCGACTACTTAATGCAGCATTGCCCAGCAGAATCGGGCTTGATGTTATTTCGCAGTATTCCAGATCCCCCTGGTTATGAGATTCGCTACAAAGGTGAAGTGCGCAAACCCGTGATTCAGCTCTCTGGATTACAGTTGATTGTCGAAACCCTTATTTTGTCAAAATAGCAATATATGGGTTTATTACTGTGCTCTTTAACAATATATTGGT
# Right flank :  TTTGTGGGTGCAACGTCTGAGTACGCTTGGTTTGTCTTCCCCACGCAGGTTGGATTACAGAGTTTTATATAGGCTTAATCTTTGAGTTATCAGTGAGCCGGATATGGAAATGACGGATAAGTTAGGAAAGTTATTGCGAATTAAATGTTGAATTTACTGAATAGAGGGGCGATATGATGATTCTATTACAGGGTTATTGGGTTGGGGCTGCGCTGGTGGCGTGCGGCTTGCTGTGGGTGATGGTTAGGCACTTGGATAAACATGATTGGCAGTGGGACAAAGGCGACATCTGGTTTCATTTTGTGTTTATGGTGTTGTTCTGGCCTTTAATGCTTTTGGGTTGGGTGAAACAGGGCAGGCCTCATTGGGCTGATTGGCTGAAACCTACGGCTAATCGTGCCGATTATTACCGAGAAATCGAACGTGCCTATCGAGAACTGAAAGCCTGTGGCGCTTATGTTCGCTATAAACCCAAACCAGAGGGGATTTGTGACAACAGC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTCCCCACACAGGTGGGGGTGTTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.10,-11.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.14   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//