Array 1 2396501-2398689 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134195.1 Raoultella ornithinolytica strain NCTC13096 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2396501 28 100.0 32 ............................ AAAGGACCGCGGATTGACCGCCGCCGCAAAAA 2396561 28 100.0 32 ............................ ATGATACTTTTGATATATTATTAAGGTATATC 2396621 28 100.0 32 ............................ GTCAAACAGGGCATAGTCACCGGCGCGAAAAT 2396681 28 100.0 32 ............................ GTCAGCTCATACAGGTATCCCGTTTTCAAAAA 2396741 28 100.0 32 ............................ TGGACCGCGTCCCGGATCTGCCCGCGCATATC 2396801 28 100.0 32 ............................ GGCCAACTGTGCGGCCGCCATGGATCTTCCGG 2396861 28 100.0 32 ............................ TAACGGTTCTATGCGGAAAATAATCCCCGTGT 2396921 28 100.0 32 ............................ TGTGTGCGGCCTGATGTTTAGCCGGGAAATCA 2396981 28 100.0 32 ............................ TCGCCGAGCATCCTGGCTTACGCTACTGATTT 2397041 28 100.0 32 ............................ TATTGGCGACGATATCGGCGACACGTTAGCCG 2397101 28 100.0 32 ............................ TGCCACATCTTCTCCTCTTCGCCGGAGTAGAC 2397161 28 100.0 32 ............................ ATGCAGGCGAATAACTACGACGAATCTGAATT 2397221 28 100.0 32 ............................ AGAATACCCCATTTCACCAGCTTATTAGCATT 2397281 28 96.4 32 ........T................... CCACGGCGATCACGCCTTTATGATTGGCATAC 2397341 28 100.0 32 ............................ AACACGAACCGGGCCGGCGCCGATTTTCTTCT 2397401 28 100.0 32 ............................ ATCCGCGCCACGAGTAAGTGGCATGATGGCTT 2397461 28 100.0 32 ............................ TTCAGCCAGGTGACTGAACGGTATTTATCAGG 2397521 28 100.0 32 ............................ GAGAACGGCGGCGCGAGGACCGAACTCGTAGC 2397581 28 100.0 32 ............................ AATTCTCGGCGCTATCATTGATGAGTTCTGAC 2397641 28 100.0 32 ............................ GATGTCCCGCTACCGAACATCGAATCACCGAT 2397701 28 100.0 32 ............................ CATCAACGAACCGCCTGATCGTAGCCCGTTTG 2397761 28 100.0 32 ............................ ACGCTCGGGTCGTCGTTCTTCCACTGCTTCAT 2397821 28 100.0 32 ............................ TGGTGACGCGCTGTTATTCCTGACCTTACAAA 2397881 28 100.0 32 ............................ CATATCGTCATCAGATTAAAGTTGAGGTCTGA 2397941 28 100.0 32 ............................ ACGACGAGGCACGGCCGGCGTTTGTCACCGAA 2398001 28 100.0 32 ............................ TGCAAAGCCGGACGTTCAATCGAACCGTCTTG 2398061 28 100.0 32 ............................ AGCGTTCCGACAGCTGCTGCAGCTGGCGATGA 2398121 28 100.0 32 ............................ CAACAAGCAGGCCGAATGCGATTACATGTACA 2398181 28 100.0 32 ............................ ACAGGGTGGTGGCCTGATTAAGACGCTGCTTA 2398241 28 100.0 32 ............................ TTCAAATAGTCCAACGACGCCATGCCCTCCAG 2398301 28 100.0 32 ............................ TGGGCTGACGACTTCCGTAAGCTGCGGGTATT 2398361 28 100.0 32 ............................ TGCCTTTGGCCTGGGCGAGTCAGGCGGAATGA 2398421 28 100.0 32 ............................ GGCCAGCCGTGGACTTTGTATACGCGCCCGTT 2398481 28 100.0 32 ............................ CAGTACGCCTGCTCCAGAGCGTCAATCGCTAC 2398541 28 96.4 32 ...........C................ GATTGCCCGGATAAGGGCAAGGCGGGAACAAC 2398601 28 96.4 32 ...........................G CGTTGAGTTCCGGGAGCCGCGGTTTTGACGTT 2398661 28 82.1 0 ......................GT.TTG | T [2398681] ========== ====== ====== ====== ============================ ================================ ================== 37 28 99.2 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACGTTCGCTTTCGCCTGGCGTCAACGTGCCGCCCGCGCTCTTGCGCCGGGCAACGTTGCGCTCATTAATCCCGGTGATGCGCAGAATGTCGGTTTTCGACATTTCCGTCCACTCATGAATATTATCCAGAATGCTGACCGGTAATCCCATACTCAGCAGCTCAATCAACTGCATACCCCGATTCGCCGGTAGCCCGGCATAGCGCCACAGCGCATTATCGGCAGGTTGCTCTGCAGGAACCCAGGTTTTCATCTTCCCTCCTGAATAAGGACATTTGTCATGCTTTATTATAGTCATTTGTCGGGTTGTTGAAAATATAATCGCCGGGCAGGTCATGAGTTGATTGCGGTTTTGTGGCTGGCGGCCCAACTCCTTTTATTTGTTTATTTTGTAATTCATTGATTTTTATTAAGTATTTTTTGGCGTTAAAAAAAGGGTGAAAGGAATAAATTTGAGGGATTTTATATATAAAACAAAGAAGTGAGTTGATATTATCTCA # Right flank : GCATTAACTTGCGTATTCTAAAATAAACCGTTCATTCACATATGGAATGCAAACTGAGAAATCGGATACGGACGAACACAGCCCTTCGCACGGACCGTCAGCGGGACGGTCCGCTATTTTCGTATTATTAGCCTTTTACTGCTGCAACACTTCAGCAAATTTCGCCAGCCATTGCGGATGGGCGGGCCAGGCAGGGGCGGTGACCAGGTTGCCGTCAACATGCGCCTGATCGATACCGATCTCAGCATAATGCCCGCCGCTGAGCCGTACTTCTGGCGCGCAGGCCGGGTAGGCGCTACAGGTGCGGCCTTTCAGTATTCCGGCGGCGGCCAGAAGCTGCGGGCCGTGGCAAACGGCGGCAATGGGTTTGCGCGCCGCGTCAAACGCCTGAACCAGTTTGAGCACCTCGTCATTCAAGCGCAGATACTCCGGCGCTCGTCCACCGGGGATCAGCAGGGCGTCATAATCCTGTTCTTTTACGGCAGCAAAGTCGGCGTTGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //