Array 1 95203-91154 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPEP01000001.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 95202 28 100.0 32 ............................ AGGGCAGACCGTGTTCGACATTAGCGCAAAGT 95142 28 100.0 32 ............................ TTGAGCCAATGGAAGACTTGGCCTATAGACGG 95082 28 100.0 33 ............................ CTGAAGGGGCTACGCATTTTGATGGCAAGCACT 95021 28 100.0 32 ............................ CAAGGCTTGTGCAACGGCCAATTGGTAGTCGT 94961 28 100.0 32 ............................ GATACAAAGGAGCTTACGGCTACATAATGATT 94901 28 100.0 32 ............................ ACCTACGCCCAACTCTGTTACCAGGTCATTTA 94841 28 100.0 32 ............................ TGAAAGACAATCGGCTATTGGAGGGTAAGTAG 94781 28 100.0 32 ............................ GCACAGAAGAAGAAAAGCTGATTGATGAGGCG 94721 28 100.0 32 ............................ AGCTAGATACGCCGCATAACGGTCATCTTTGC 94661 28 100.0 32 ............................ AATACCGTTCACTACATTGGGGATTACATAGC 94601 28 100.0 32 ............................ AAATGAAACCAGAACAAGCACGAGAAATTCTA 94541 28 100.0 32 ............................ AAAGAGATAACAAGAAAGAGCTGGCTATCACA 94481 28 100.0 32 ............................ TTGGCAGTACCCTATGGCTTCTTCTACTTTAA 94421 28 100.0 32 ............................ GCAGCAGTACCAGCAGCCACAACAACCGATGC 94361 28 100.0 32 ............................ AAGCTAACCAAGCCTTTTAGCTCTTTCGCAAA 94301 28 100.0 32 ............................ GACTCAAAGAGATAGGCTTGTATCGTGCATGG 94241 28 100.0 32 ............................ TGAAATTTGGTTCACAATGAACCGCCGGTCAT 94181 28 100.0 32 ............................ CAAATGAAAAAACTTAGTGTTTGAGTCTGGAT 94121 28 100.0 32 ............................ TGGCTATCTTCTTGCTCGGTATTGGCGCTAGT 94061 28 100.0 32 ............................ ATCGAAAACGGTACGAACTATCAGTACATGGT 94001 28 100.0 32 ............................ TTTCCGTCAGTATTGTTAGCGGCTGGCTGCGT 93941 28 100.0 32 ............................ GTGAGAATGCCGAGCGATACAGCAATAATTGT 93881 28 100.0 32 ............................ TTCTTGTCGGTCGCAGCACTGCTTACTGTTGT 93821 28 100.0 32 ............................ GCTCCACGTTACGGAGCATACAACAGTAAGCA 93761 28 100.0 32 ............................ AAAAGACAGAATTATTAGCTGGGAGACAGCAA 93701 28 100.0 32 ............................ GTTCGCAAGGCTCGACTAGAATTGATTCCTGC 93641 28 100.0 32 ............................ TTTTGGCCACATGGAGCGCCACTAAGTACAGG 93581 28 100.0 32 ............................ AACACGCAATGAAGTGCTGGACCACATGCTAA 93521 28 100.0 32 ............................ AATGTGATTTAGCTCTACCTGTGTAGCCATTT 93461 28 100.0 32 ............................ ATTACGTACCGGAAGCACGCAGCCAGAAGTTA 93401 28 100.0 32 ............................ ACGCCGTACCGTTCGCCCAAAACGTCGGTTAA 93341 28 100.0 32 ............................ GTTACGACTAGCGCTTTCGTAATCAACTACCT 93281 28 100.0 32 ............................ ACCAGTTCTCGCCCCCTAAATCCGTTTGATCA 93221 28 100.0 32 ............................ TTTTGATGTTTGAACCAGGTCGAACATTTTCA 93161 28 100.0 32 ............................ AGATATTTTTTCTTATTATGGTTAACAATTAA 93101 28 96.4 32 ......................C..... AATGGCGCCAATGACTTTGTTGATATTAATAG 93041 28 100.0 32 ............................ AACTAGCGTCACCGCCAAGGCCGTCAATCCAG 92981 28 100.0 32 ............................ TCTAGTTGCTACTATAGAAGGACAAACACGGG 92921 28 100.0 32 ............................ TTAGTTAGTAGTTGTGATTTTACATTGATCAC 92861 28 100.0 32 ............................ CGTGAACGACACAACAAGTCTAGGAATTTACA 92801 28 100.0 32 ............................ TCAACATGTAGCGATTGCACCCCAGCGCCTAC 92741 28 100.0 32 ............................ GCAACCATCGAATACCGCGTCAAACACTACCG 92681 28 100.0 32 ............................ GCAACAAAACACAGGCGTGGCTTGCTGAGCAA 92621 28 96.4 32 T........................... ACTACGCGCTGCCATGATTGTATTCTTGATGA 92561 28 100.0 32 ............................ ACAACGAGATTTGGCAAGTACGTCATTCTCAA 92501 28 100.0 32 ............................ ACCGCGAATCATAAACTCCACCAGGCGTTCAA 92441 28 100.0 32 ............................ TCGCGCTGCTTGCGTTCGCTCGGTGGTAGCTT 92381 28 100.0 32 ............................ AGCAGTCGCAACTAAAAGAACTAGCAGATCGA 92321 28 100.0 32 ............................ ATTCTAAATCAATCTCTTTTGGCCAATGCCAA 92261 28 100.0 32 ............................ TGAAAACTGGCAAGATGATTTTGTAACAGAAG 92201 28 100.0 32 ............................ GGAAAAAACAGAAGCTTCTACAGCTATCGCTA 92141 28 100.0 32 ............................ AGCGTTCGCCAAGTGCTTGCAAGCGTTGAATA 92081 28 100.0 32 ............................ TTGCTTTCCAATGCGCGGCGGCGATCAGCCAT 92021 28 100.0 32 ............................ TACCATCGACCATCGTTACGTTGACCAGCATG 91961 28 100.0 32 ............................ ACACCAGTTTAACAACGCAGGAGAGTGAGAAT 91901 28 100.0 32 ............................ TTGCGCGTTGTCGTGCGCACAATAACAAAGTA 91841 28 100.0 32 ............................ TAAACGCCCACATCGTCAATCATTGCGCGAAT 91781 28 100.0 32 ............................ TAAATTAGGATCAACATCCATCAGGACGCCAT 91721 28 100.0 32 ............................ ACTATGACATCCACCCTCAATAATAGACTTTA 91661 28 100.0 32 ............................ GCGTGAGGCTCAGGTACTCAGCGGCATCGCTC 91601 28 100.0 32 ............................ ATTGACAACCGGATAGTCCTGATTTGGCTCTG 91541 28 100.0 32 ............................ GAACTAAGAAAGGGCGCGAGATCGAAGTTGAC 91481 28 100.0 32 ............................ CTTATATCGAACAAAGCTAGCAGAATCAAAAT 91421 28 100.0 32 ............................ ACCCAACTCAGGCACGTTAATCACTTTGGTTT 91361 28 100.0 32 ............................ GAGGTTAGATGCCAGAAGTGCGGCGGCGAGCT 91301 28 100.0 32 ............................ GTAGGCCGGAGAGCTTAGCAGCCCGCAGGATT 91241 28 96.4 32 ..........A................. AATCCCTGAAGGCGACAATGTTACAGAAGTAG 91181 28 89.3 0 ..........A..A.............T | ========== ====== ====== ====== ============================ ================================= ================== 68 28 99.7 32 CTTCACCGCCGCACAGGCGGCTTAGAAA # Left flank : GGTTAACGGACTATTTACACATAAAGTCGATTCAACCGGTGCCTGCCAATTGTGACCATGAAGTGTTTCAGCGCAAGCGCGTAAAAGGCCAAACACGTATCGAAAAAGATATGCACAATAAGGCAAAGCTTTGGGCTGAAAAGTCGGGGCAAACTCTAGAGCAGTGCTTGCAAGTTTTAGAAACCAGCAAGCCGAAAGCCAGCTCCAAGTTGCCGTTTGTTTGGGTGGAAAGTCAAACAACCAAGGAATCGGGTAGTCAAAGGTTTCCCTTGTTTATCGAGCGACTGGCAAGCGAAGGTAAACAAGTAGGCATATTTAATTGCTATGGCTTGGCCGATGTGAACAAGCCTGCCAGTGTGCCGAACTTTTAACCTTGTTTTAAGCGCTCTTTAAAAAGTTGTTTTAAATCAACAAGTTACGATTAGGGCTGGAAAAAGGGTATTTTTGCAAAAAATGCGCTTAGCCCTTGTCGTAGCTTATTTTTGTGTGCAAAAATTGCA # Right flank : TATTTTTCAGTTATCTAAATTTGTTTCCCGAAGCGTTGCTTCGGAAAACCTACGAGAGTTTGTTGAACTGGTTTCAGACAATTGTTGGAAAAAAATCGCTTTGCGAACGCATTGCAGGCATTCCACTGAAGAAGCCTACCAATAATTCCTAAGCATTTAAGAATGGCGCATTGACTTGGAGTGATGGTGCAGTTGATATAGTGTGGGGTGCCGTATGGGATGGGACTCGAACCCATGAATGTTTACCGAGGTAATATGACCAGCTCCAGCTAGCACCATACCGCGTTTGCTATTCTAGCAAGGCAGTCCGTAGAATGGCCATTCGATACGGTGGATGAATGTTTATCTCCGCCAGCTCTCAAAAGGACGACCCAATGAAAAACCTGCTGTTGCCTGGGCGTCATGCGTCTAATTTGCCTTGGGCGCAAGCGCTTGCGTCCTTATTATCGCAGCCATTTGAGGTGGTTGAGTACCCTTGGTGGCGGGGTGATGAGGCGGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //