Array 1 39204-39829 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMRW010000018.1 Clostridium tyrobutyricum strain 1001713B170207_170306_A10 NODE_18_length_65365_cov_71.2957, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 39204 30 100.0 36 .............................. AGGAAAAGTAATGGGAGAGCTTAGATAATTATTATC 39270 30 100.0 37 .............................. CTGGAAGCTGGTCAAAGCCTTATGAAGATGCTGGCTA 39337 30 100.0 36 .............................. GTTCAAAATTAAAACCAATTTTATCATCTCTATCAT 39403 30 100.0 36 .............................. CTCAGTTTTAAATTTTTTCAATTCTGCTTTAATCAT 39469 30 100.0 36 .............................. TAAATGGATAAAAATTACTACAAACATGTTTGACGA 39535 30 100.0 36 .............................. CAATAAACATCTAAGCTACCACGATTTAAAAGTATT 39601 30 100.0 37 .............................. TTAAGAATAATATAATAGCTTATACATTTTATGATAA 39668 30 100.0 36 .............................. AGTTGCATTACAATCGTCATAAAGGGGGAATGTAAG 39734 30 100.0 36 .............................. CCAGTATAAACTTGTCCTATTTTGGTAACAAAATAT 39800 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 100.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAT # Left flank : AGATGATAATAGTTAATAGGGTAATACTGTTAATCAATTTTGATTTTTTCATAACAGCTCAGCTCTCCATTCTTATTGAAATAATATTATATATACATATATATAAATTTTTTCTTTATTCCTCATGGAGAGTTGGAGAAGCCAAAAGCTTTTATAGCATAATGGATTTGAGGTAGAAATACTCAAATTTTACTATCTTTTTCAATATTCGATTAAAAGTTTCAATTATTTCCCGAAAAATAGATTTCTTGTACTTTTAATATAAAAAAATATATATAAAGACTACGAAAAATAATTGATGATCATGAACTTCAATCTATAGGATATATAAAGGTATCAGGTGGAATGTGTTTTGAAATGAAAAGATATCTGAAATACTTTACTTCGTACAAATATAAATTTTATGTAAACAATTCAAAAAAATATACGACTATATTTATTCAATTGATTTTTGTCTAGTTTCAATGCCAATAGCAATGCACGGAGTGCATTACAGAGTT # Right flank : TCACAGTAAAAGAGCCATTCTCTAAATTCATTATAACTCCCAAACCATTGAAAATAAAGCCATCTAATAAAATTTTTCCAACCATTTTGTATTATCTCACTTTAGAATTAAGAAAGATTACAAATATACTTATATCAATGTCTTATAGCATATTTAAAAGTAATTGAGGTTGGAAAAATTATTTATCTATATTATTAAAATTCAACTATATCTATTTCTGTGAAATATGCAATGGTATTAAAGGATGGCCTAAGGCCTTTTCTATTTCAAAAACAATAATAAAAGTAATAACACTTACAACTGATCCCACAATAACAGCCATAATTCCAAAAGGTTCATTGAGATATTGCCACCAGAATCCAGCAATACTTCCAAGAATTATAGACAGTATACCAGCATGCTTTGTAACATTTTTCCATGTCAAACCAAAGATGAATGCTGCAAAAGGACCAGCTGACCTCATGGTGAAGGCAAATACAAGCATAGGTATAATCTGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 294590-291996 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMRW010000001.1 Clostridium tyrobutyricum strain 1001713B170207_170306_A10 NODE_1_length_329539_cov_58.5502, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 294589 30 100.0 36 .............................. AGCTCAATTTAAGGGATTAGTTGGAAAAGGTGAAAA 294523 30 100.0 36 .............................. TTATTATGCTTAATCCTCTGAGCATATCTGTATTTC 294457 30 100.0 35 .............................. TATATAGATGCTTTAGATAAAAAGATTTTTTACAT 294392 30 100.0 37 .............................. TGAGTTCCAGCATGGTCATTAACTACCGATTGTTTTA 294325 30 100.0 34 .............................. TTAATTACTTTTAAAATAGAATATCCATTCCCAG 294261 30 100.0 36 .............................. CAGATAAAAGATGATCCCGATGGCTCCAAGAGAAAA 294195 30 100.0 37 .............................. GGATAAGTCATATTATCTACATTTATTTTTTCTTGCA 294128 30 100.0 36 .............................. TGTTTGAAACTGTAAAATACTAAAACTGGTTTTCCA 294062 30 100.0 36 .............................. TCACCGACACCTTTTAAAGCCTTTTGACTTCTCTCA 293996 30 96.7 34 ......................G....... ACAGCTACATCTTGTTTACAGTATTTTTTAAAAA 293932 30 100.0 36 .............................. TCGGTTTACTGGATAACTTCATAGATTAAACAAATA 293866 30 100.0 37 .............................. GTGATAAATGTGCTTTAAGTATTATGAGCCGATTAAG 293799 30 100.0 36 .............................. AATGTAGTAGATACATCAGATGCAACAGCTCTAGCA 293733 30 100.0 37 .............................. CAGTTTCCATAGTATGTAGACATAAAATCTTCGTACG 293666 30 100.0 36 .............................. GGATAACTAACCCCGTCTGAACACTTTGGACAACTA 293600 30 100.0 36 .............................. GGGTAAGTTAATGGCAAGCCCTTCAAATGCAAAGAC 293534 30 100.0 38 .............................. ATTCTATTGGTAATCAAGAATTATTGCCTAATGATAGT 293466 30 100.0 36 .............................. GAAAATATGAAAAACGCATTAAACATGAATTCTATT 293400 30 100.0 35 .............................. AATTAAATGCAGCAATGATGAAAACAGCATCTTCG 293335 30 100.0 36 .............................. ATATAATTAACAATGATAACGAGAAAGAGTATTCGA 293269 30 100.0 36 .............................. TAGGTGGCTTTTAAAGTATTTATTGCGTCTAAAATA 293203 30 100.0 35 .............................. GATATAGATGTTGAAATGTCAACAGATTATAAATT 293138 30 100.0 36 .............................. ATGGGATGTCTTTTATTTTTTGGGTAAGCGATGAAG 293072 30 100.0 35 .............................. CTCAAAAGGTTAATAAGAAACAATACAATAGCTAT 293007 30 100.0 36 .............................. AATACTCTCTTATAAGAGTTTCAGCACGTCTAGCAT 292941 30 100.0 36 .............................. ATATCACTAGAACTAGTAAAACAGATAGAAAGGGTA 292875 30 100.0 36 .............................. CCACCAGTGAAGTCCACAAACTCCCAACCTCTTTCA 292809 30 100.0 36 .............................. GACTTGTATTTACTCACACAATCACTTCTTTCAGCT 292743 30 100.0 35 .............................. CTGGCAGCACAGTAAATACAATCTGCGTCACTTAG 292678 30 100.0 35 .............................. TAATTTTATCCTTCTCTTGGATTTCTTTTTGGCAG 292613 30 96.7 36 ......T....................... GTTGCCATGGATGCTCCACAAGGGCCTAAGTACCCA 292547 30 100.0 36 .............................. GAATTGAATGAAATAGAAGGGCAGGAATATCAAGGA 292481 30 100.0 37 .............................. ACGTATACCATATCTTTTATGGCAAAAGGGGCTTTTA 292414 30 100.0 34 .............................. AAGGTACTTCTTAATTGAGGTACCTTTTTAATAT 292350 30 100.0 36 .............................. TAATTTTATCCTTCTTTTAGATTTCTTTCTTGAAGG 292284 30 96.7 34 .................T............ ATATCTGGCTTTTTATCTGGAAGCAATGCACCTT 292220 30 100.0 35 .............................. AAGTTTAATGTCAAAAGATATATTCAAAGCTTTAG 292155 30 100.0 34 .............................. TTGGCGGTAATTGTGTGCGAGGCTATTTTATCTG 292091 30 100.0 36 .............................. TTTATTCTTGCAAGACCTGGAGAAGCACTTTCTGTA 292025 30 96.7 0 .................T............ | ========== ====== ====== ====== ============================== ====================================== ================== 40 30 99.7 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : ATTTAGTTTGAAAAATATGATATAGTATGGAGGATTTTAATGGGAAAAAATTTTAATTTTAATTATGCTTTTGTATTTTATGATGTAAATGAAAAAAGAGTAAATAAGATATTTAAAATATGTAAAAAGTATTTCCACCATCATCAAAATTCTGTTTTTAGAGGATCTATAACTCCATCTAAATTAATAAAATTAAAAAGTGAATTAAATAAGATCGTAGCAGATAAGGATTTTGTCACAATCATAAAACTTATAAATGATAGTTGCTTTGAAGAGGAAACTTTAGGTATAAATGATAAAAATACTGAAAACTTGATACTTTGAATTTTCCAACCTGTTTTCTATTTAGAATCACTTCAATTTATTTAGAATCAATGGGTTACGTTATTTCTTATAAAATATATGCATAATAAAAATTGGTTGGAAAAAATTCAGCGAAAACCTTTATTTATATGCTTTCAAAGCTTATAATGAAATTAAAGAATGGCTATTTTACACAG # Right flank : CCCATAGAAGCTCTATACTTGCCCATATATTAACTGTTGGACCTTAAAATTTTTGAAAATATTAAAATCAAACATTTTAATTAAAGAGACAATTATTATAAATAAATTGGTATAGAATTATATTGAATAAATCTATACCAATTTTTAATTTGATATCAAGCCTTTGTTAAAATATCTGTTAAACCCAATTTTTCTATTCTCTTTTTTATCTCATTTTTATCTGTAGTATATAGTCCCTTTTCTTTCATTCTGTTAAAATACTCTGCACCTGCAAAAGTGTATCTGTTTTTTCTACCCTCTGCAGTTTTAATTTTATAATTGGCATAGCTTATTATATCTCCAATGGCAGTTTCAGTTGGAAGTACCAGCTCAGGTCTGCCGAGAGCATATCTTACTGCATTATGCCCTGCAAGAGAACCTGTACATATGGCTTCTGTATGACCTACGAATAAACCGCTTTTTTCTCCACCACAGAATAGGTTATCTACTCCTCGTACATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //