Array 1 54810-56561 **** Predicted by CRISPRDetect 2.4 *** >NZ_OBKY01000003.1 Dellaglioa algida strain CMTALT10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 54810 36 100.0 30 .................................... AAAAAATAATTGAAAAGATTGCGAATGTTG 54876 36 100.0 30 .................................... GATGTTAACTTAATAGTCGATTTAACAGAC 54942 36 100.0 30 .................................... AATAAAGACTTTCGATGACCATTATACCAG 55008 36 100.0 30 .................................... TGAAACGATTAAACAGTTTGCAGCAACGTT 55074 36 100.0 30 .................................... TCCTTTCATTACATAAAATGAAAGTTATTT 55140 36 100.0 30 .................................... TGCTGCTACTGGCAACACCATTGCTCCAAG 55206 36 100.0 30 .................................... CGGATCGTGTATTAAAAACGCAATTGACGA 55272 36 100.0 30 .................................... TATAACTAGATACAAGATTACAATTAATTT 55338 36 100.0 30 .................................... TTATTAACAGCATTATCGGATGGTACCTCA 55404 36 100.0 30 .................................... ATTCAGCGAGTATTTTTTTATCTGCCTCTA 55470 36 100.0 30 .................................... TTTCTTCATCAGTATCATCTCCGATTGATG 55536 36 100.0 30 .................................... AATGACAAAACCAGAAGAAGCTGATTATCT 55602 36 100.0 30 .................................... CTGTAATTCTGTTTTACCATGTGCCATTTT 55668 36 100.0 30 .................................... TATTAACGAAAAGCAGTTAGGTAAACAGTT 55734 36 100.0 30 .................................... GGATAAAGGAATATTACCCGAACAATTCTT 55800 36 100.0 30 .................................... TGATGAAGTACCAGAGCTAGGCGATACTGT 55866 36 100.0 30 .................................... AATGTCGATTCAGCAGTAATCGTGCCATTT 55932 36 100.0 30 .................................... TAAACTGAGTTCCATTGACTCAACTGCTCT 55998 36 100.0 30 .................................... TTTGAAAAATGATAAAGATTACAGCACTGT 56064 36 100.0 30 .................................... AATGGGATTTGAAGAACTCCTGAATAATCC 56130 36 100.0 30 .................................... TTATAATTATTTAATTAATAATAATTTAAT 56196 36 100.0 30 .................................... TATAGTAATATGATTAGTGAATACAACTGT 56262 36 100.0 30 .................................... CGAAACATTTGGCGATTACTATACGCATGA 56328 36 100.0 30 .................................... GCCAATTGATAAATTTGTTCGTTATAAAAA 56394 36 100.0 30 .................................... AATCGATGATTACAGATTTGCAACGAAATC 56460 36 100.0 30 .................................... ATATAAATCATATTCATCAATTGTGTCTTG 56526 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Left flank : ACTATTGATTTGAATAAATTATTTCAAAGTAGATTAACGAAAAAAATTATTGGCGATTTGAGCGATGGACAAATCCAAAAGTTAAATCAATTGGACACGGAAATGCGCACCGCCATTTTGGATATTGCTTTTATGTACGATATATCTCTAGACGTCAACCAAGAGTGGGATATAGCAAGAACAATTAAATTTTTTAATTTAACATTTTCTAATGTCGTTCAAGGTAACTCATATGGTATAATAGAAAGTATAGTATTAACCGCTTCAGAATTAAATGAAACAAAAATTATCGTGTTAATGAACGTTTCGCACTATCTTAGTATCGGCCAATTCAACGAATTGGTAAGACTAGTTGCGACATTAGATGTAAAACTCTTTATCATCGAATTTTCAGAAATAATTGATGCAAAAAAGTATCAAAACTGCCGGTATTATCATATTGATAATGACTACATAGAGTGGCGATATGAATAGTATGAATATTTCATGAGAAAAAAATG # Right flank : AGTTGAAGCTGGCATTAGTATTGACGGATAGTTTTAGAAGAGTATCAAATCAATGAGTTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 63-428 **** Predicted by CRISPRDetect 2.4 *** >NZ_OBKY01000004.1 Dellaglioa algida strain CMTALT10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 63 36 100.0 30 .................................... GGCCAGTGATTCACTAGTATTAAATGGCGG 129 36 100.0 30 .................................... TTCTCTTCAACGTTTTTAACATCGTAATGA 195 36 100.0 30 .................................... ACGTCAGTTACTTATTGAATATATTGAACG 261 36 100.0 30 .................................... AAATTTCATCACGACTGAATGAACCTTTAT 327 36 97.2 30 ..........................T......... TTCTTTGTTTTTAAATAATGAAGCTAACCC 393 36 94.4 0 ................................A..T | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 98.6 30 GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Left flank : TAGAAGAGTATCAAATCAATGAGTTTATTAGCACTTTCGTTCCATTTTGAAATAGACCCATTG # Right flank : TTATACCTGTAAAAAATGGATTCAAGAAGGGTGTTAGTTACCCTTCTTGAATCCATTTTTATTATACATCTGATAAGATTTGAGTCACTAAAAAAACCTAGACTACCACATCTCAAACAAACGGCATCATAATCTCAGAATTTTCAGGTCTACGATCTGTCTCCAATGTTGCTATTTGATGAATAATACTAGACAACATTATCTGACTCATTTCTTTCTCAATAGTTTCTTGAAGTAACGCATATTGTTCGGATAAAACATCTTGAATGTTACCACCGACAAAGCAGGCAGAATTTGTTTTAGGATCCACTTGAATTAAATTGGTATCATTTTCGATACTTTTATAGATATCTAATAAACTAATTTCTTTGGGTGACTTTGCAAGTAATGCCCCGGCCTGCCCATTAGTGGTTATAATCAAATTAGATTTTTTTAAAAGACTCATAATTTTTCTGACATTTGATGGATTCGTTTCAACACTATCTGCGATATTTTGACTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //