Array 1 1706640-1705932 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP072504.1 Bifidobacterium pseudocatenulatum strain N2 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=================================	=====================================	==================
   1706639	    33	 100.0	    35	.................................	TGGTTGGTGGCGAGCGTCTGATCGGCGTCGTTCAG  	
   1706571	    33	 100.0	    32	.................................	CAGCATGACATACAGTTGGGCAACGCCTACGT     	
   1706506	    33	  97.0	    34	....T............................	TTGACAGTGTACCGTCCGCCACCGGTGGCCGGAA   	
   1706439	    33	 100.0	    37	.................................	CCCAAATTCCACGTCCACGCCCACGGCACCGCTTCCA	
   1706369	    33	 100.0	    35	.................................	GCCATCGTTGGTGCGGACGTAGAATTCGTCGCCGA  	
   1706301	    33	 100.0	    34	.................................	ATCACCTCAGCCGGCGAGGTCTACGCCTACCGCG   	
   1706234	    33	 100.0	    37	.................................	TACGTGCTCAGGTCATACGGCCATACAGTGGCCGCGG	
   1706164	    33	 100.0	    34	.................................	ACCATCGGCATTGCGCGCGCGAATCAAACCCGAA   	
   1706097	    33	 100.0	    33	.................................	CATTTCATTTTTTCGCATCCTCGCTTTGATTAG    	
   1706031	    33	 100.0	    34	.................................	CTCATCGGTCGAAGGCTGAGGATTGCACCACTCC   	
   1705964	    33	 100.0	     0	.................................	|                                    	
==========	======	======	======	=================================	=====================================	==================
        11	    33	  99.7	    35	GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT	                                     	       

# Left flank :   CAATACCGATGAGGACAGCCTGCGCTTTTATAAACTTGGCGCTCGATATGCGGATAGGATTGAGCATTATGGACGTGAACGGAGTTTGCCGGTTAATGATGTGATGATGATATAGCACAGGCAAAATGGCATGGTGCCATAACGATATGGTGTGGGGTATGCTGGGTTGAGCGTTTGAGTGCGCCGTCCGGTATTCAGAGTGTGTTTTCTAGCCAGCAGTATTGTGTGTTCGGCAAGGTGGCCGGTCTTGGAATGGTGTTTGTGCGAAGTGTAAGCGCTCATGATAAGGGACGTCTTTCGCACCTGAAAAACTATCGAAATCCGAATTGTGATTTTCGTGGGGCGTTTTGAAAACTAAATAATGGACATTAAAATGAGACAGAAAGCCAGTTGCTCGTTTTAGACATGTTGTTCGTCGTATCGGCGGTGTTGTTTGATATGCTTAAAGCTAGGCAGCTGGCTTGCGTCTCAAAAAGCGGACAAAAATGTCCAGCTGCACT
# Right flank :  CGGTGTCTGCATCGTTCTGGCCGCCGCGTGGATGTTGCTCTCCCTGTTTATGTCCAGTGTTCCCCGCACATGCGGGATTCCACATGTGCGGGACTGCTAGCAACGGAAAACCAGGGTTTTTGTCCGCTCGGGGCGACTTCAACGGTAATACGAGCAGGAACTGCGACTGGGTGTTTCGCATGGGGTCGCTTCTGAAAGCTATGTAAAAGAAATAGTGTATGTGAAAACGGTCGGGTGGGTGCGGATGCACGAGAAATTGGCTAACCTGTCGAATTTCTGTTTTACTTTGGTCGTTCATCTCGTGAGTGGTCGTCAAGCTAGACATATTGTGTCCCATGGGATGCAACATGTCATATGGAAATACATATGACTGGCGAATATCGCCAATGGTTCAGCCGGATAAAGGACCGGAACGCGAAAGCCCGAATCAGCGCGAGACTCCGATTGCGCTTCTAGATGGGGCGGCCGGTGGGTGACCTGCATACGGTTGGTGACGGGGC

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [9,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.30,-7.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,9.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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