Array 1 18248-17565 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMRF010000040.1 Coprococcus comes strain D54t1_190329_E4 NODE_40_length_27115_cov_19.4422, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 18247 30 96.7 35 ...............G.............. AAAGTATTTCCTGTCGAAAGAGCAGACGGAGAGAA 18182 30 96.7 35 ...............G.............. CCCGGAGATCAAATGTCTATATCCGGGGTAGAAAA 18117 30 100.0 34 .............................. CCGCTTGCGGCGGCAAGGTTCATAACGCCAGAAA 18053 30 100.0 36 .............................. ACTTCTTTGCACATCCTAACCAGTTTCCCACGTTCC 17987 30 100.0 36 .............................. ATAAGAGATGCATATACACCAGAAAGTGATATTTAT 17921 30 100.0 36 .............................. GCTGGATTTTAAGGAGAAAACAAGAAAGCAGCATCT 17855 30 100.0 36 .............................. ACTGTTAAATCCTTAAATCTGAAATCTGCCATGATT 17789 30 96.7 35 .............G................ TGCGGCGTACATCGCCGGCAGCCGACAGCCCGCAG 17724 30 100.0 36 .............................. GACAAAAATTTGGAAATTCGCAACCAATCCAACATC 17658 30 100.0 34 .............................. TATTTAACAGTAGATATTGTTATCGTCATTTGCT 17594 30 96.7 0 ...............G.............. | ========== ====== ====== ====== ============================== ==================================== ================== 11 30 98.8 35 GATAAACAATAACATAAGATGTTTTGAAAT # Left flank : TTGAAAGAAGGGATGTAATGAAAAAGAAGAAAGAATTGAATTATAATTATGCATTTTTGTTTTATGATGTGAATGAAAAACGAGTTCAGAAAGTATTTAAGATCTGTAAAAAGTATCTTTCACATTTTCAAAAGTCTGTATTTAGAGGAGAGATGACGCCATCAAAGTTTATACAATTGCGGAAGGATTTGAACCAGGTAATAGACAAGGATGAAGATTTTATTTGCATTATCAAGTTGATGAATGACAATGTGTTTGGAGAAGAAGTTTTGGGAAATGGAGGGGAGGTAACAGGAGAAAGTTTAATGATATAATTATAGGATTTTTACCAGGCGGAAAAAGAATGAAAAATCCAGGAAAGCTTGAAAAATTAAGAGATTTATGGGATGATAAGTAGGGCGGTTCAGGATAAGGGTGTTGGCTGGTAAAAAATGGAGAAATATAGAAAATATAAGGGGAAAAAGGGGAGGGGAGAAACTAAAAAACGCGGAAATGCGAGG # Right flank : AAAAAAATTGCACTTGCAGGTTTGAAGAGAAAAGAGATCAATAATAACCTTTTGTGGAGCAATACACAGTTTACATTTTAGAATCTGTGGAAAATATAACGAAGAAAAATGGAGAATAGATGAAAAAAGTAAGATGGATTATTTTCGGAATGTTAGTAGCTTTGCTTGCAGGATGTTCTGGAAAGAAAACAACAGAAACTTCTGCGGATGCAAAAAATGCGGAAAGTACAGATGAGAAAAATACGCTTGATTTTGTAGATGCACACGGAGAGCGTTATACGGTGGAAATCAATGAAGCAGTTGCGAAGAATCCGTATGATAAAGCACTTTTTGTAAAAAATGAAAATAAGATCAGCTATGAGGATAAGAAATATACTTCAAGGCTTGGCGTAGACGTATCTGTTTTCCAGGGAGATATTGACTGGGAGCAGGTGAAAGCAGCAGGCTATGAGTTCGCAATTTTGCGGATCGGATATCGTGGCTATGGTGAAGAAGGTACG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAATAACATAAGATGTTTTGAAAT # Alternate repeat : GATAAACAATAACATGAGATGTTTTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //