Array 1 111499-110737 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMWN01000004.1 Pediococcus acidilactici strain JCM 8797 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 111498 36 100.0 30 .................................... TTAATAAATATGGTATGTCCCCTGTCGCTT 111432 36 100.0 30 .................................... TTAATTAAGAAAGTTACTGTTGAAGAAATT 111366 36 100.0 30 .................................... CCAGCGACGCTGATGTCTTGGCATGGGAAT 111300 36 100.0 30 .................................... GGACTAATGCGAACGAAATATCTCCGATTC 111234 36 100.0 30 .................................... TAATCACTTTCAGTGTTATCTAATTCCAAC 111168 36 100.0 30 .................................... TCGATAAGCACGATACTGAGCTAACCAGTC 111102 36 100.0 30 .................................... GTAGGGTAACTGATGTTAGTAGCGTTATTT 111036 36 100.0 30 .................................... CATTCGTTTGGCTATGTTTTCAGAATTTCT 110970 36 100.0 30 .................................... TTGTTGACGCAGCCATATTTTTAAACCAGA 110904 36 100.0 30 .................................... TACTATTCACTGCATCCCTACTGCAATACT 110838 36 100.0 30 .................................... TTGCAAAGAGACAAAAAGCCTACAACCATG 110772 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.5 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAGCGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGTGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAATGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //