Array 1 2117212-2113461 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065982.1 Corynebacterium urealyticum strain FDAARGOS_996 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2117211 28 100.0 33 ............................ CTCATTGCGCAGATGGGTTGCCTTCCGGGCAGC 2117150 28 100.0 33 ............................ GTCCGCGACGGCGTTCCATGCCCTACGGATGCC 2117089 28 96.4 33 ...........A................ CCGGCGGGGGCTTCTCCGAGTAGCCACAGAAAA 2117028 28 100.0 33 ............................ GCTATCGACAGTGAGGACACATCATTTGTACGC 2116967 28 100.0 33 ............................ CTGCTCATTTAGTTGTTATTCAGTTGTGTCCCG 2116906 28 100.0 33 ............................ CGCGTCCAGGTATGCGGTAGCCAGTTCCGTGGA 2116845 28 100.0 33 ............................ CGTCTGGGACAGCACCGACAAGGTGGACATCCA 2116784 28 100.0 33 ............................ CCCACCCACACAATCGGCGTACTCCTCGACCCA 2116723 28 100.0 33 ............................ CGGCACCGCCGAGGATACTAACCTTAAGTTGTG 2116662 28 100.0 33 ............................ GGAAGTGAGGACATCTGCGATGGCTACTTCCCA 2116601 28 100.0 33 ............................ GCGTCTGAAGGGGCCGCGGACCTTAAACCCGTA 2116540 28 100.0 33 ............................ CCATCAGCCCCCGGAAGCTAACCGCCAGGAAAG 2116479 28 100.0 33 ............................ CAACTCACCACCTACCACAAGAACCCACGCCAA 2116418 28 100.0 33 ............................ CGGGATCAGGTACGCGTGTCCGAGCACGCCGGG 2116357 28 100.0 33 ............................ GGGCGATGTTGTCGCCAAGGTGCAGGAGGTCTT 2116296 28 100.0 33 ............................ CCAGGTCACGCGGCTGGATAAGGACACCGCCAA 2116235 28 100.0 33 ............................ GACCTCGCCAGGGCGCAGGAGGAAACGGAGAAG 2116174 28 100.0 34 ............................ GCGCACCACCCCCCACCGGCAAGGTGCGGTGGGT 2116112 28 100.0 33 ............................ TCACGCCCCGTTGCCTGCGCCAGCTTCACCCGC 2116051 28 100.0 33 ............................ CAGGCTCCACAGGTGCGAGTGTTCCCTGCGCAG 2115990 28 100.0 33 ............................ TTTCCTGCATGATATGGAGGAGTTGCGCCATAT 2115929 28 100.0 33 ............................ CTATCAAGGCGCGCCTGTCGTCGCGCTCCCGAT 2115868 28 100.0 33 ............................ CCTGGTGGACGAGACCCGCGCCGCACTCGAGTT 2115807 28 100.0 33 ............................ CCTTTGATCCACCCACACGTGAAGGGTGAGGCG 2115746 28 100.0 33 ............................ GGGGGGTGGCTAAATAGTGAAACCTGATTTCGA 2115685 28 100.0 33 ............................ GGGGGTGGATATTTCCCAGGGCGAGCTGGCATA 2115624 28 100.0 33 ............................ GCCAGGTCATTCACCAGAGCCCGCCCAAAGCTC 2115563 28 100.0 33 ............................ CGCGCGGCGCGCTGCCAAGCGCGAAAAATAGTT 2115502 28 100.0 33 ............................ TCACGCCCCGTTGCCTGCGCCAGCTTCACCCGC 2115441 28 100.0 33 ............................ CAGGCTCCACAGGTGCGAGTGTTCCCTGCGCAG 2115380 28 100.0 33 ............................ TTTCCTGCATGATATGGAGGAGTTGCGCCATAT 2115319 28 100.0 33 ............................ CCTGGTGGACGAGACCCGCGCCGCACTCGAGTT 2115258 28 100.0 33 ............................ CCTTTGATCCACCCACACGTGAAGGGTGAGGCG 2115197 28 100.0 33 ............................ GGGGGGTGGCTAAATAGTGAAACCTGATTTCGA 2115136 28 100.0 33 ............................ CACCCGGTCGAACGGCTCCGTCGTCTTCCAATG 2115075 28 100.0 33 ............................ CAGCGTGAGTTCCTCCTTGGTCATCTGTGCGCC 2115014 28 100.0 33 ............................ TTGGATCGAGTCCCGCTCCATCCCGCGAGCGAC 2114953 28 100.0 33 ............................ TCTCCCCGCCCCTAGTGGCCGCCCACGCCCGCC 2114892 28 100.0 33 ............................ CGTGCTCATGAGGTACGTGCCGTCGGGCAAGTG 2114831 28 100.0 33 ............................ TTCGGGACCGGGGTATCCTCTCCAGCCGGGCCA 2114770 28 100.0 33 ............................ GCGCACCTCACCCCAGTAGAACTGACCTGGCTC 2114709 28 100.0 33 ............................ CGGGTGATATCTGCCAGGGCCGCGGACATTTCC 2114648 28 100.0 33 ............................ GTGTACGGCGGGTCGGCGGTCGCGCGGTTCACG 2114587 28 100.0 33 ............................ GGACCGGCCGGAGCCGGTCGAAGTTGAGATTAC 2114526 28 92.9 33 ............TC.............. GTATGCGCAGGAATCGTGGCCGGGTATGAGGTT 2114465 28 92.9 33 ............TC.............. TCGTGCGCGGTCGAGTGCGCAGGCGCAGGGTAA 2114404 28 100.0 33 ............................ CCCACTAGCCACCACAAAGCAGCTCGACACCCT 2114343 28 92.9 33 ............TC.............. CCCGACATGCACCGCCTCCGGGTCCACCGACAG 2114282 28 92.9 33 ............TC.............. CCTGCCACACCGCGTGGATTACACCATTAATAA 2114221 28 92.9 33 ............TC.............. CAGTCCGAAATATCTAGATACCCGGCGGCGGCG 2114160 28 92.9 33 ............TC.............. CAATGGCACCGAACAGCCCGTTTAATCGAACAG 2114099 28 92.9 33 ............TC.............. CGAACATTTGCTTTTGGAGGGCCGTAACGCCGC 2114038 28 92.9 33 ............TC.............. GGTGTGGTTGGACGAGAAGTTCGACCACCAGCA 2113977 28 92.9 33 ............TC.............. CACGGGCAGATCATACGAACAGGGCTGGCTGGT 2113916 28 92.9 33 ............TC.............. CCGGTGCCGCAGCTGGTGAGGAGTAACCCCCGT 2113855 28 100.0 33 ............................ GTTCGTGGACTTCTCCGGCACGCCAGCGACTGC 2113794 28 100.0 33 ............................ CCACTTCGAGCAGCTGTGTGAGCAGGTACTCAA 2113733 28 100.0 34 ............................ GAGGTGTGTCCGGTTTAGGCCCTTTAGGGGCCTG 2113671 28 96.4 33 ................T........... CCGCCTCTCAAGCGGTGAGGAATCGCGCGACGG 2113610 28 100.0 33 ............................ CCGCCAGGCAGAAACGCTGGAAAAGGCAGTCAC 2113549 28 100.0 33 ............................ TAGTGCAAGAGGTGTGTGCGGTTTGAGCGCGTT 2113488 28 75.0 0 ...................A.CGTG.AA | ========== ====== ====== ====== ============================ ================================== ================== 62 28 98.3 33 GTGCTCCCCGCGCTAGCGGGGATGAGCC # Left flank : GCGACATTGAGCTCATGTTGTGGAGCGAGCTGGAGCTGACGTCCGCGGGCATTAATTGGGGGAAGGAAGGAGCGGAGCAGTGATGGTGCTGATCGTCACTGCCTGTCCAGCGGGACTGCGAGGGGACCTAACGAAGTGGGTTAATGGAACTCGCACCGGGGACGTTTGTTGGTAGGCCTTCGGCGCGGATTCGTGAGCTTCTATGGGATCGAACGGTGGAGTTGTGCAAGGACGGCCGTGCGCTGCTGGTCTACAGCAGCAATAACGAGCAAGGTATGGAGTTCCGCACGCATCGGCATGACTGGGAACCCACCGATTTTGACGGTCTTAAGCTCATGATGCGCAAAAGCGATATTGAGAAAACACGACGCAGAACGGGTTGGAGTAGGGCTCGTCAATTGAGACGGAAGTACGAGGGCCGGTAATTCGGCACTGGGGGTGGCTTCGTACAGTTGAAGCTAGAATGAGGCTTGGGCTCGAATATCCGCTGATCATACAGT # Right flank : TCTCACCGGGGGTGTTTGGAGCGGGGAAAAGTCGCTTTTATACAGGTTGCAGTGCCTTGAAGGAGTTAAATTCTGTAACTTTGAATGTTACGATACTGAAGTGAGCGGAAATGCTAAGGCTGGAAGAATGGTTCGAGCTGCTCGCGAGCAGCTCGGTATGTCGCAGAGTGAACTTGGTGCGGCACTCGGCAGAACGCGCCAGTGGGTCTGGCGACTTGAAACGGGGAATGACCCCAGGGCTCGTTGGCCTGTTGGTCTCACTCCGCTCCTGGCGGCGGTGCTGCAGATCAGTCCACGGGATCTCTTGATCGCAGCGGGGGTCCCAGAGGAGAATTGGCCAAACCTTGCGAGCGTGAGCTCTAACGGCACAAATCTCGTGGTGATCGAAGCTACTGGCCTAACTGAACGGCAAATTAACCTGCTGCGCAGCATTGCCGAGGAGTTTAGGAGCAGGGATCTTGACCATGAGGGGTTCTATGACGCCGACTAGCGTTGCGCCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCTAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCTCGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //