Array 1 52314-50498 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOXN01000005.1 Lacticaseibacillus chiayiensis strain BCRC 18859 contig00005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 52313 36 100.0 30 .................................... GCCCTTACCAGAAAACTAATGAAGATTTTG 52247 36 100.0 30 .................................... CCAATAGTATGTCTGTATAGTTTTCTTCAA 52181 36 100.0 30 .................................... AAGCGCAGCGCACATTTCGTCTAAGGTATC 52115 36 100.0 30 .................................... TTGGAAACGAAGAAGTTTGTCCGATAACTT 52049 36 100.0 30 .................................... TTCATCTGTCCATTGCATCTACTCGCCTCC 51983 36 100.0 30 .................................... AACGTACATGGTTCCGGGCGATAAAGCACA 51917 36 100.0 30 .................................... TTCATCTGTCCATTGCATCTACTCGCCTCC 51851 36 100.0 30 .................................... GAAAGTTTCTCGTATTCAAGTTCATTTAGA 51785 36 100.0 30 .................................... GATTGTCAAAACAATGCGTCAGCGCGCCGC 51719 36 100.0 30 .................................... CGTGACCATGGCTATACTATATAACCTTGT 51653 36 100.0 30 .................................... GAAAGTTTCTCGTATTCAAGTTCATTTAGA 51587 36 100.0 30 .................................... CGGCGACTACGTGAATACGGCATTTTTAGA 51521 36 100.0 30 .................................... TACCTAGCTTGTTTTTACCAAACGCAACGC 51455 36 100.0 30 .................................... ATGATGGATAAGAGCTATGTACGTCCATGT 51389 36 100.0 30 .................................... ACGGTTAACCTTAATCCTGACAGCATCGTT 51323 36 100.0 30 .................................... TGCCGCGGCCGTTGGTCATGTAAAGCTTGC 51257 36 100.0 30 .................................... AACTTTTCGCGGATGCCGAAAGATGAAAAG 51191 36 100.0 30 .................................... GAGGAGGTGGCGGAATGAGACCAGTAGAAG 51125 36 100.0 29 .................................... AGCCCAATTGAGAGTATCACCAGCCTGTG 51060 36 100.0 30 .................................... AGATCAGTCGTATTCCCCAATATACACCAA 50994 36 100.0 30 .................................... GAATGGATTAATACGTCGGAAAGTGACAAA 50928 36 100.0 30 .................................... GCTGGTATGGTCAAGAAGCACCGGAGGCGG 50862 36 100.0 30 .................................... CCTTTTCGCATGCCGCTCATCGCCATCAAG 50796 36 100.0 29 .................................... AGCCCAATTGAGAGTATCACCAGCCTGTG 50731 36 100.0 30 .................................... CAGACGATTAACACGCTTAGGTTTTGGGGT 50665 36 100.0 30 .................................... AAGATCGGAAACGATTTTCCCAACTCTTTC 50599 36 100.0 30 .................................... AATTCAACCGCTGTGGCGGCCAAATATGCG 50533 36 88.9 0 ..T...........................G.A..T | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.6 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAACTAGATTTGGACAAGTTGTTACAACGTTGGATTTACAAAAAGATTGCACAAATGATTGACGATCAGCGGCTTGTTGAGTTAATTGACCAATCGCAACATATGGCCATGGAATTGCTGAAAGATCCTCTTTTGAACGACCTTCCTCTCACAGTTGAGCCCGGTGGGAAGCTGGAACAAATCATGAAGTATTGTAACCTCCATTTCGATGAAGGGGTAATTGTAGAACCAGTTTCTAAAATTGAAGCAGTGATTCAAACCTTAACAAAGCTTGAGGAAAAACGCCTTGTAATATTGGCTAATGTCAGTCATTATTTAGGTGCTAAGGAGTGGAAATGTTTGGTGGATCAAGTTAGTGGCACCACACTGGAGATACTTCTCATTGAATTTTCAGATGTCGAACGAAAGAGTTTCTTTGAAGACTGCCAGTATGTGTACATTGACAACGACTTTATGGATAGTCGAGAGCTGATTGATTAAGAGACCGTGTGAAAACACCG # Right flank : TTTCAAATTGGTGTTAGTGGCCAAGCTTATTAGATAAAGAGCACTGATGAGGTTGGTCGTAAGAGTAATACGAATTTAACAAGATTGTATTTTGTCAAAGGCTGCTAATGAAATTTGCGGCTTTTGTTTGGCTAGACAAAAGAAATCTGCAAGTTGATTGTTAACCACTGTAATGCTAGGGCCTGTCTTAAAACTATTTCAACCATACCAGAATAGCCGAGATATAAACGGTTTCCAAGAAAACGGGGCCAATTTATTATATCGTGTTGCTAAGCGAATGCAATTCTTCACCTGATTGAAAAGGCTTTCAATCAGGTGGCGATCCCAGTAGACATGATAATCACAATCCCATTTTTCTTTTATGCTGGCTTTAGGTGTAATGGTATAGGAACCATGCTCGGTATCGATATAATCACGCAGATGCTTGGCATCATAAGCTTTATCGGCAATCACATTGACGCCAGCAAGTTCAAGTTGTACCAGCAATGGTTGCGCTGCTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //