Array 1 83683-85137 **** Predicted by CRISPRDetect 2.4 *** >NC_015320.1 Archaeoglobus veneficus SNP6, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 83683 30 100.0 37 .............................. AACTGTGACCGAATCGAGAAACGAAAGAAAAGAAAGA 83750 30 100.0 45 .............................. CGTTTAGAAACGTCCCCGGCCATGTCGAGGGGGGCTATTTTGTTG 83825 30 100.0 38 .............................. CGAGAAATGGTCGAAGCGATAGGGCTGAAAGAAGGCGA 83893 30 100.0 38 .............................. TGCTCGGGGCGTTAAGTGTTGGGAAGATAGGAAAGGCA 83961 30 100.0 37 .............................. TCCCACGGTAGCATTCTGGTAGTAAATCCATCACCTG 84028 30 100.0 37 .............................. CCAGATAGCTTCATGAGGAGATAGATAACTGCACCTA 84095 30 100.0 37 .............................. GAGCAGGAGCGGGAGCACTTGGTGGAGCAATAGGCGG 84162 30 100.0 38 .............................. GTTCAGATCGAAGGACAGATCAGGTTGGAGATTAGAAA 84230 30 100.0 36 .............................. CAGATTGGCTGGCAGGCTGGCAAGGGGTTCTACGAC 84296 30 100.0 38 .............................. GAGGGAGACGGGCGGTGTGTAGCATGGCAGGGTATAGG 84364 30 100.0 36 .............................. GTATTTAGTGGTGGAATGTCTGTATCCTGTACTGGA 84430 30 100.0 38 .............................. CTGGTTCGTTCTTTCTCTCTGCGCGTACGACATCAAGT 84498 30 100.0 38 .............................. TTCCCGTTGACTGTTTCTTCGTCTGCAAATCTCTTCGG 84566 30 100.0 36 .............................. CCGTCAGGTGGTGGTGGAGGTATTGTAATCAAGTAA 84632 30 100.0 38 .............................. ATTGCTACACGTCCAGCACTGGCCGGACTCATTGTAGT 84700 30 100.0 39 .............................. AACAGGAAGATGGACAAGCCCAGCACGCCAGCGAAGATC 84769 30 100.0 38 .............................. TAATGGTTGCCGGGAAGGCGATTTTGTTAATGAAAGCG 84837 30 100.0 37 .............................. CATGTCGCATCTATACTGATGCGGTGTTTTAAAATGT 84904 30 100.0 38 .............................. TCTGCCGGGAATAAGGGGGAGGATATGATGGATACAAA 84972 30 100.0 38 .............................. GAGTGTCGATGAGGGCGGCGCATTCACGAAAATAAACG 85040 30 96.7 38 ...............A.............. AACGGGCACCGGGCCGTTGAGGATTTACTCTCTCAAGA 85108 30 93.3 0 ...............A.............T | ========== ====== ====== ====== ============================== ============================================= ================== 22 30 99.5 38 GTTGAAATCAGACTATTGTAGGATTGAAAG # Left flank : TACCATTGCACGTAGTTCATGAATTCCTTTGCCCTCTGAGTGAGTGTGCGTGTCGAAGCAATCCATGGGAAAATGTCTACTGGCAGCTTTTAATTTTTTGGTGTTTTTTTGGTCAGACCTGCGATCAGGCCCGTTAGTATTTTACCCCCACCCGAGTCTGAACCAATGTTAAACAGACTTCACAAGCGAATGAGATGGGCGACGCATAGAGCGTCCGTCGTCCACCTTTTAATCCACTTTAATTATTAGTTAAACTTTTGATTTATATCTCCCTCTCTCCCGATTCTGATTGCTGACATGGCTTTGCCTATCTGCTTTTCTTTTGCATTTTGATATATGTGAACCTGGTCTTCGATAAGTTAAGCTAAGCGGAAAAGGGAACTCTACAGCAGGTCGTCCACCTTTTTAAAGGTCGTGCACAATTGGTGGTGGATGATTTCACGTTTCGATAGCGACCTTCAGAAACTTTTAAATTGGTATTTCAGGGAGAATTACTGATA # Right flank : TGCAGCCCGGGCAGTAGTACACCATCCAAAACCCCGTTGAAATCAGAAGCAGGATTGAAAGACGTAGTTTTAATTAACACCCTCTCCATAATAACAAAATATGCTCATTGAAGACTACGGGTTTGGAAGGATTGTTGTCAAAGGCAGAACATACACGAGCGACGTTATTGTGTTCTGGGATGGAAGCGTTAAGGAATGGTGGAGGAAGAAAGGTCATTACGCGGACATCAACGACGTTAAGTCAGTTCTCGATGCAAAGCCTGAAGTCATAGTCTTCGGCACGGGTAAGTACGGAGCGATGAAAGTAGATGAAAATGCTGTCAAAGAGCTTGAGAAGATGGGCATCCACGTGGAAGTGGACATAACAGAAAGAGCAACAAAGATATTCAACGACCTTGTTGCGGCTGGAAAGAGGGCTGTGCTTGCTGCTCATCTGACGTGCTGACTGTGTGGCTGAACATTTTTATGCATTGATACCAACGAAGAACGATGAAGCTGAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGACTATTGTAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 2 665147-669771 **** Predicted by CRISPRDetect 2.4 *** >NC_015320.1 Archaeoglobus veneficus SNP6, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 665147 30 100.0 39 .............................. GAGATTTCCCCTTTCAATCCTCATCCTCATCTATCTCCC 665216 30 100.0 38 .............................. CTGCGACGTATCAAGAGTCTTTCCGTTAGCCGTTTCAT 665284 30 100.0 38 .............................. GCACAGAAAATTGAGTGCTGGAGAGGATGCAAAAAAAT 665352 30 100.0 37 .............................. ATCGGGGAGGGAGATTAGGATGGATATAGAGTGTCTA 665419 30 100.0 40 .............................. GAGTTCTTTGGCAGAGATAAGTTCAGTAAGGTTATCTCAA 665489 30 100.0 38 .............................. GCGCTATTCTTTTACTTCTCGCAATGCGGTAATCAATG 665557 30 100.0 38 .............................. AAGCGCTTGGCTGCTTACTGCGTGGCTCAGTACTGCGC 665625 30 100.0 38 .............................. GAGGTGGTTAGAGACATCTTGAATAAAATGATGGGCAA 665693 30 100.0 38 .............................. CTTATTGACTTCTTCAATTCTCCCTTTTAGATATAGAT 665761 30 100.0 37 .............................. GCATAACAGAGTGCGCCCTCCGTGCCTCCCGTTCCGT 665828 30 100.0 39 .............................. ATGGGGGAACTGGCTCGAACTCGCTGATTTCTTCGAAGA 665897 30 100.0 37 .............................. CAAATTAGCAAGGGCTACAACGATACCATCATACGGA 665964 30 100.0 38 .............................. ATCAACATCGGTCCGGGACAATATCAGTTCAAGGCGAG 666032 30 100.0 38 .............................. CTATGAGTACTGTAAAAGGAATTTAAATTTAAAATAGG 666100 30 100.0 38 .............................. TTCTAATGCCGTGAAGTATGCTCTTTTTGCTTCGGGAG 666168 30 100.0 38 .............................. GATTGTGGCGGTGATTTGGTGGACTTAGGCAACAATGA 666236 30 100.0 37 .............................. TACTTCAGACAATACAATATCCCAATCGAACAACACA 666303 30 100.0 39 .............................. ACGGTGAACGTTGATCATCCTTTGATTGTCTTGCTGGTT 666372 30 100.0 38 .............................. TGTCCATCAAAAGGCCTAACGGAGGATGAGGTTCAAGA 666440 30 100.0 38 .............................. TTCCCACTTGATGATACCCTGACCTTCATTCTTTTCGA 666508 30 100.0 39 .............................. TTGTGGTATAATTAATAGTTCTCATCTGCCATTTTTTAT 666577 30 100.0 36 .............................. GCTCGCAAGGAAATGCTGAACGGAAATAGGCACACC 666643 30 100.0 43 .............................. ACTCTTTCACCTCCTAACAGCTTTTTTCTATATACTGTCACTG 666716 30 100.0 39 .............................. TCTATACCACCTCAAAAAATGTTTAAGGAAGCAGAATCT 666785 30 100.0 38 .............................. TTTGGGGTAACTGGCTTGAGCTTGCAGACTTCTTAGAG 666853 30 100.0 39 .............................. GCGAGCATGAACGGGAACTGCACGAATCCGCGGGCTCCC 666922 30 100.0 39 .............................. ATAGCTGCAAAAATCTTTTGCATCCCTGCAAGTCCCCTT 666991 30 100.0 37 .............................. GCAAATAATCTATAAACTGTCTCGCTAAGTCGAAAGC 667058 30 100.0 39 .............................. CTCGAGTTCCCTGCTCATCCTGCTATATCTCTCAAAAAT 667127 30 100.0 40 .............................. AGGATTACAGCCGGAATCCTCAGCCAGCCGACGAAGTAGA 667197 30 100.0 37 .............................. AGATTGCCCCCCTCAGCATGGCGGGGGACATTCGCGA 667264 30 100.0 39 .............................. TATTGTCAACCTTTTAATTCGCTCTTTCAATGCCCTAAA 667333 30 100.0 38 .............................. TAGAGGAATGGGAAATTCTGGGGAAGGATGACGAAAAA 667401 30 100.0 39 .............................. CTAAGAAGGCTTATAGTTGAGCACAGACACTTGGATTTA 667470 30 100.0 39 .............................. TAGGGGGGAGGTAGATGAGGATTGAAAGAGGGAATCTCA 667539 30 100.0 38 .............................. GAGAAGAGCTGACGTTCACTGAAGAGGACGGAAACAAC 667607 30 100.0 39 .............................. CTGGGGTAACTTTCCGAAGTTCAAATGCAGGCATGAACT 667676 30 100.0 37 .............................. GATTCTAAGTTAAAATAGATGGGTTGAATAAAAAAAG 667743 30 100.0 41 .............................. GGACATGGGGCAATAAGCAGCCATTCAGCCCAGAGCCATCT 667814 30 100.0 39 .............................. ATAGAGTTCTATGTTGTAGTATGTTCCTGCAGAGAGATC 667883 30 100.0 38 .............................. CATGCTCTTGCTGAGCCATAGCCAAGCCCATGAAGCGG 667951 30 100.0 38 .............................. ACGTAGATTTGACATTCTCAGCGGGCGCAACGAGGCAG 668019 30 100.0 38 .............................. TTACATATATCTACAAAAGCTGCACAATCTGCAGCATC 668087 30 100.0 38 .............................. AATAAGAGCGGGCGAGTATGGCGACATGAGCGAGGCAA 668155 30 100.0 42 .............................. CTTCGAATGGGATAAGGGCTTAGAGGATTTGGCCGAATGGGA 668227 30 100.0 39 .............................. CATGCTGAAAACTACATTGTCTTCAAGGGCGTTTCTTAT 668296 30 100.0 38 .............................. AATCCTGTGACAGTGCAACGTATTACTTTACTATTCAT 668364 30 100.0 38 .............................. GACTCTGTGTGTGAGGTGGTGGTAGAGATGGAGCAAAA 668432 30 100.0 38 .............................. TTTTGAGAAAATAAGACGTATAAACCTTTGTAACAATG 668500 30 100.0 38 .............................. AAATTCCTCGGACGGGATAAGTTCAGCAAAGTTATCGC 668568 30 100.0 38 .............................. GTTTGATGTGCGAATGTGGATACTCGAAGAGGTATGTT 668636 30 100.0 38 .............................. TTGAACCATATCTCGTTCTGAGGGAAACTCATCTGAAC 668704 30 100.0 38 .............................. GTTCCAGCCTGTGATAATAAAAAGCACCACAGCACCGA 668772 30 100.0 38 .............................. ACATAAATCATTATCCTGTCGAAGTTTCAGATTATTTG 668840 30 100.0 39 .............................. GATATACCATCAACTGAATTACCTGAATTGCCATTAACA 668909 30 100.0 39 .............................. GTTGCGTATGCGCCCAGATATGGTACGAACTGTTCAAAA 668978 30 100.0 39 .............................. CGCTGGGACGATAATCAGACTTGTAAACGCTGATGCTAC 669047 30 100.0 38 .............................. CGCTGATACAGCTTCAGCGGAGTCATACGCTTAATCCT 669115 30 100.0 38 .............................. TTCTATTTCTCGTCCGATATCCCTACTGTAGTGTCTTA 669183 30 100.0 38 .............................. AATTTATTGGGCCGATGGCAACACGCCCAGCTGAGCTT 669251 30 100.0 38 .............................. TTTTGTCCCGCTGAGCACGTGCACGCTGCGAATGATTG 669319 30 100.0 38 .............................. TTCATTCTCTCTTTCAATCTCAGCAATCTTACTCATTA 669387 30 100.0 39 .............................. TACTTGCGGAGCTACTACGACAAATACGCCAAACTGCTC 669456 30 100.0 38 .............................. GTAGGGATTTCTTTAATCCAGGTTTCGTCAATTGCTGC 669524 30 100.0 46 .............................. ACATCTGAATCTTCGAATACCTCAATGCTGTATATGCTCGCTGTGC 669600 30 100.0 39 .............................. AGTACCCTTTCAAGCACAATCACGGCGATATCGTCTGCA 669669 30 100.0 42 .............................. CTTTGTACCTCAGCATAGCTCCCACAACACCGAGCAGCCCGG 669741 30 93.3 0 ....................A........A | G [669768] ========== ====== ====== ====== ============================== ============================================== ================== 68 30 99.9 39 GTTGAAATCAGACTAATGTAGGATTGAAAG # Left flank : TCTTTTTCGTCTCTTGAAAAGACCTCTCTGTGGATGAGCTTTCCAAGCTTAACAGCATCACTTTCTTGCTCCATCGTTACATTGTGGCTGAAAAGCCAAAGTTTCGTCTTGCAAATGAAATAATAGTTAACCTGCGTACCACGCACGTACATCTCGGAAACTTCCGAAATCACAAGTTTGATTTGTTTCTCTCACCGTATAACCTTTTCTCCATCCATCGTCCATCTTTTAATCTGCTGTTAATATTGATTAAACTTTTGATTTTTATTTGGTTCTTTTAGGCTACTGAGGATGGAATGGACGTTGTTTTGAATCATCCCCTTTGTATTTTGATTTTTATCGATTTACATTTGAATAATCTGGATTCTATGAGAAAGAGGTCGAATCCGTGGATCGTCCACCTTTTTAAAGAGTTTGCACAACTGAAGGTGGGCGATTCGGGATTGCCATAGCAGCCTTCAGAAACCTTTAAATTACCATTCAGGAGAAAATTACCGAGT # Right flank : ACGTACTGTAGTGGAGTTTAGAAGGATCAAAAAATTCTCATCATTATTAACAAAAATATCGCTATTCTTAATAAGTATTTGTTATCAAAAAATCAGCCAATGCCCAAAAGGGTCTCAACAGGAATTCCCGGATTCGATGAACTTTGCGGGGGTGGGCTGCCGCAAGGAGGTACGTATCTTGTTGTAGGAGCTGCAGAATCTGGAAAAACTGTTTTTTCTATGCAGTATCTGGTAAATGGGGCGAGGATGTTTGGGGAAGCAGGAATATTCATCACCACGGAGGAGAGCCCGCGGCATATAAGGGATCGCTTTTCCTCATGGCAGATTGAAGACCTCGAAGACGAGAACATGCTGGCAGTAATAGATGCACGCCTGTCCCTGGATATGGGGGAAGTTGCGGCAATTAAAGACGAGATTGGTGCGGAGAGAGCGGTTCTCGATTCTGCAAACCCGGTATGTTTTCCACATCCTTGGGCTTTGTTGAACGTTTCAGGTATAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGACTAATGTAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //