Array 1 10545-12673 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHJE010000002.1 Aeromonas caviae strain CN17A0110 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 10545 28 100.0 32 ............................ CCCTGCGTGGGTGACTCACTCAAGGGCCAGCT 10605 28 100.0 32 ............................ TTTGACGCCAACGTGCGGCGGCCTGAGTGGCT 10665 28 100.0 32 ............................ TTCGAGCCAGGGGTTTCAGCCGTCTGGGTGGA 10725 28 100.0 32 ............................ ATAGGGGTTGATAAGGCCAGGCAAGAACCCGC 10785 28 100.0 33 ............................ GACCACCTGGTCGCCGAGTACAACATCGCCCGC 10846 28 100.0 32 ............................ CTGTCGTTGGCGACCAGCTTCATGGCCCAGTC 10906 28 100.0 32 ............................ TAACAGGGAAGCATGTTCATATCGTGGGTTTC 10966 28 100.0 32 ............................ GCGCTGGGCCATCGCCACCGGGATCCGCTCAA 11026 28 100.0 32 ............................ AGACCGAAGCGGCCGAACTGCTGGGGATGAAT 11086 28 100.0 32 ............................ CAGCTGGTACCGGCGGCGCGCTCTGAAACCCC 11146 28 100.0 32 ............................ GACTACAGCTCCACCGGTGATGGCGTCAAAGG 11206 28 100.0 32 ............................ TGATGCGGGACAACAACCAGAAGCTAAGCTTT 11266 28 100.0 32 ............................ AAGGCGCAGATCAACGGCGAGGGTGGTGGTTT 11326 28 100.0 32 ............................ AATGACACCCGGGCGCTGCTGGCCCTGATCCC 11386 28 100.0 32 ............................ AAGGGCAGTGCCACCGGTTATATCGCCAAGTA 11446 28 100.0 32 ............................ AGCTTGCCCAAGCCCAGGCGGCCAAAGAGGTT 11506 28 100.0 32 ............................ TATCAGTCATGGGACTTTACCAAGGAGCAACG 11566 28 92.9 32 ..........A....A............ AACCCCAAGACGGCCCTGCGCGAGACGGTGGT 11626 28 100.0 32 ............................ TTGTTCAGGTCGAGGCGAGCCGAGATCTCATC 11686 28 96.4 32 ..........A................. ACAAACCAGTTTCCCCCGACAAGGAAACAGAC 11746 28 100.0 32 ............................ TGGATTATGCCGCGCTGGAATTGGAGTTGTAC 11806 28 100.0 32 ............................ AGGAACGTCCCGGGCCGATGGCCATGTCATCG 11866 28 100.0 32 ............................ GGCTCCCTGTTCTGGGTGCTGACCGAAATCAC 11926 28 100.0 32 ............................ AGGGAGAGACGTGGCCACGGGCTGCGCCTCGA 11986 28 100.0 32 ............................ ACCAGGCGTGGATCGTGCGCCAGATCATTCCG 12046 28 100.0 32 ............................ AACTGGCCCGAACCGCTTCACCAGTTAAATCC 12106 28 100.0 32 ............................ TCAACTCGGCGACCCGCAAGCTGGGGGCCAAC 12166 28 96.4 32 ....................T....... TTGAGCCAGGAGCGGTAGTAATCGAGGATCAC 12226 28 100.0 32 ............................ GCGGAATACTCCGGCGCCGGCGCTCGGCTCCA 12286 28 100.0 32 ............................ ATGTCGTTTTGCTGGCTATATGCCGCGTCCGC 12346 28 100.0 32 ............................ ACATGACAGAGCTGCAAATGTTCCACGTTGCA 12406 28 100.0 32 ............................ ATGAGCAGTAGTGAGCGATGAAATCGGCCTCG 12466 28 100.0 32 ............................ TTGGATTTGTTCGGGGTGCCAGCGACGTACAG 12526 28 100.0 32 ............................ TTCAACGTCTGGCATCAGTGGTTGGATGCGGT 12586 28 100.0 32 ............................ AAGACCAGGTTTGGCCGATCGAACGGGAACGG 12646 28 82.1 0 ..................TCA....TT. | ========== ====== ====== ====== ============================ ================================= ================== 36 28 99.1 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : TGGCCGAACTGCTTAACCTTACCGAGGTGAACTGGTTGCAGGGGATGCGGGACTATATCCAGATCGGCGAACCAGAACCCGTTCCTCAGGGAGCCAGCTTTCGTGTGGTAAGGCGGGTGCAGGCCAAGAGCGCTCACAACAAGCGTCGCCGCTCGGTGGCCAAAGGCTGGTTGAGCGAAGAGGAGGCGCAGGTTCGCATCCCCGATGCTCAGCAGAAGGCGATGTCTCTGCCTTATGCCGAAATGCACAGCCTCTCGACCCAAAGCCGGATGCGCCTCTATATCGAACACGGCCCTCTGCTCGATAAGCCTGTCGCCGGGATGTTTAACGCCTATGGGCTAAGCACCACAGCCACCATCCCCTGGTTCTGACCCTCTTTTTCAGGGCGTAGCTAACTCATTGATTTTTCAATGTCTGTTACGCCCTGATAAAAATAGGGTTCAGTGACGGATTTGGGGTAAGTTCTTTAACAATCAATTAGATAGCACTAATATGTAACA # Right flank : ACTGGTTGCAGCTAAACCGGAAGGGCCGCTGACTGCAGGTTCATTCCACTCCAAGATCAGTGCAATGCTGGTTATTGAGCTACTGGGTCAACAGCTATTGGAAAATAGGCCAGAGCTGGCGGGAGCTATCTCGGATAGTGCCAAGGCTACGTTGCCTTGGTTGATACAATCGCTAGCGAGGGGAGCATCATCAATACTTGGACACCAGACTGGATCGATGTCCAATGTAATCCATCCGGGTAGTATGTCAGCCAACATCAAATGGCACACTGAGTGGCATACCACAAAAATATAAAAAATTAAAAACCCAACCTAATCAATAGGTTGGGTTTGGTATGTGGCGGAGAGACAGGGATTCGAACCCTGGGTGGCATTGCTGCCACAATTGATTTCGAGTCAATCCCGTTCGGCCACTCCGGCATCTCTCCACGGGCACTCATATTGACCCAACCCTAGCCGGGAAATCAATGTAAATCTCGTTGCAGATCAGACGACTGGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //