Array 1 163701-164088 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_DS995301.1 Nitrosococcus oceani AFC27 scf_1104573000308, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    163701	    28	 100.0	    32	............................	TACCAAGTACATCAATATCTCTGGAGTTATTT	
    163761	    28	 100.0	    32	............................	TAGACAGCATTCTGAGCTGGGCGGTGGCGGTA	
    163821	    28	 100.0	    32	............................	AATTTAAAAAGAACAGAAGTCCCGTGTTATCG	
    163881	    28	 100.0	    32	............................	ACCTACTCACCAAAGATTGGGGTTTATCTATC	
    163941	    28	 100.0	    32	............................	ACCCTGGGGCTAGGCTTGGAAGTCAAGCGCGT	
    164001	    28	 100.0	    32	............................	GCTATAAAAGTTAATTAGTGAGAAAAGGGGAT	
    164061	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         7	    28	 100.0	    32	GTTCACCGCCGCACAGGCGGTTTAGAAA	                                	       

# Left flank :   GGGATGATTACAATCGAACCAATAGCAGCCGTGCCTTCTGATGCGAATGCAATTGCTTATCGGCGTGATCGTAGCGCAGAGAAAGATTTAGCAGGGTTTAGGCAACGGCAAATGCGCCGCCGAGTCCGGCGCGCCGAACATGCCCCAAACCAGCCGGAAACGAACTTGAGAATAGAGGCAAAGAGCAGGCTGCAAGATAACGAGAAAGCGGAACGGCCACCTTATTTACTATTAGAACGGGATGGCCGACGACTGCCTATTCATATTAGTACGGCAAGCTTTCAGATTAATACGAATATTTGTCAGTTCAGTAGCTATGGATTAGCCAGGAAGGTTGAAGATAAATATTCGGCCGTACCCATGTTCTGACCTTACTTTATTTTATAGAATAAAAAGGCCAGTAATAACAAATAATTAAATGAATTTAAAAAAAGTAAGGTTTTAGGCTAATGTTCGACGCAAGACTTTATGGTTGCTACAGTTTTTAGCTTTAATTTACT
# Right flank :  AGAAGCAAGTTCAGGACTTACGCAAAAGCGTATTTAAGGGTCCCCATGGTGTTGAAAGAGCAGTAGAGTTTAGGACATGAGCATATCGCTAACGTGCTTGGATGATTGCCGATATATCTAGCTGGTGGTGGACAAGCGCAGAATCCGGGAGATGCACCATCAGGCGGGGATACGTTATTTAGACTTTACGCCGGTGATGATGGTGGTCAACGCCTATTAAGATTTCAAAATATTCCGTTTTTAAGAGGCTTAATAATGTTCATTATTTCACAAGATTGACATGGATTAATCTACAGAGAGCGCCTTAATTCCAAGCTATCATCCTTAAGGTGAAGAAGGAGAAGAAACAAGAAAATAACTGCATTAAATCGGCTGATGAGAAATAGCTCATTAATGTGATAGGCCCAGGCAAAGGCAATAGCTCGGAGGAGGAGAAAAATGGCAAATACATATCTGGTGGAGAGGTTCTGTGCTGTCTTTGCGGCCTTGATTATGGTTGT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACCGCCGCACAGGCGGTTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-9.70,-9.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.51,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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