Array 1 52894-54250 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNDW01000007.1 Chryseobacterium taeanense strain DSM 17071, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 52894 46 89.4 30 T..A.-T................A....................... ATAAAACTCACTTTGCAGTAAATGATGCAG T,AT [52904,52906] 52973 47 100.0 30 ............................................... ACTAGATGGTTTAGTAATTAGAATCGGAGG 53050 47 100.0 30 ............................................... CTTACGTATATTATGGCCTTCCACTAAGTT 53127 47 100.0 30 ............................................... ACATTAATGTCTGCATAAGAATGATATTCT 53204 47 100.0 30 ............................................... AAAACTTAGGTATAGGAACTCTTTCCCTTT 53281 47 100.0 29 ............................................... TCTACTGCAGCCGCTGATCAAGTATTGAT 53357 47 100.0 30 ............................................... ACTACATTATAACCCTTAGTTACGGTTACT 53434 47 100.0 30 ............................................... AAAAAACTAATCAAATCCGCAACAGAACTA 53511 47 100.0 30 ............................................... ATATCCTTTCTTTTTAATTATACCGGTGTT 53588 47 100.0 30 ............................................... GGAAATGCTAGAAAGGTGCTACTAGAGTTC 53665 47 100.0 30 ............................................... ACTAGTAATATAGTAATATTAAATGGGGAT 53742 47 100.0 30 ............................................... ACTACATTATAACCCTTAGTTACGGTTACT 53819 47 100.0 30 ............................................... TTATTTTCGCTTCGAATTCCGGATTTACTT 53896 47 100.0 30 ............................................... TCGTCAACAAAAAAGGAATCAGGAGAAATA 53973 47 100.0 30 ............................................... GGAAGGCGAAACAAGCGGCGTGATGATTTA 54050 47 100.0 30 ............................................... TTTTGACTGAATTTATTACGACGATACCAA 54127 47 100.0 30 ............................................... AATAATGAATTATTTCCGGTCGCTGAATAA 54204 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 18 47 99.4 30 GTTGTGAATTGCTTTCATTTATCCGTATCTTTGGGATACACAACAAC # Left flank : CAAATTGTCGGCTACCCCGTTCTGGATCTTGAGAATTTCTTCACAGACATTCATAAATACATGAGAAACCTGGAGGAAGTCATCATCAGAACCATCGCCGAATACGGCCTTCAAGGAGAACGTTCGCCAGGTGAAACCGGAGTATGGCTGGATGTGGGAAAACCGTATGCCCGAAAAATCTGTGCGATGGGCGTAAAAGCTTCCCGTTGGGTAACATTGCATGGTTTTGCTCTCAATGTGAACACCGATATGCGGTATTTTGAATATATCATCCCCTGCGGCATCAAGGATAAGCAGGTAACTTCCCTGAAAAGAGAACTGGAAAGAGAACTGACTCCTGAAGAAATGGAAGATATCAAGGCGAAGATCAGAAAACATTTTGAGGACGTCTTTGAGGCGGAATTGAATTTGGTTAAGTCCTAAATCTTTTCAAAAAGTATATTGACATCTTGCTAGAAGAATTAAAATCCAAGCGTAATTTGAACTTTACGCTTGGATTT # Right flank : CCTCAAAATTTAACCCACTGACTCACAGTGGGTTTATTTATTATTTAGAATTTAAAAAATCAGAATAATTCAAGTTGCTGAAAGGTCGGTGGCGGTTCTTCTTTATTCCTGGCAAAAAAGATTTCAATATCTCCAAACTGCTTATCTGTGATACACATAATGGCCACTTTACCAGCTTTTGGCAGCATAAACTTCACTCTTTTAATATGAACTTCCGCATTTTCACGGCTTGGGCAATGACGCACATACATCGAAAACTGGAACAGCATGAATCCGTCATCGATAAGAGCTTTGCGAAAGCGGTTGGCATCTCTCATATTGGCTTTGGTCTCGGTCGGGAGATCATATAATACTAACACCCACATAATTCGGTATGCATTAAACCTTTCGGCATTCATAGCAGCTCAGGATAAGAGATCAACCGTTTTTCACCTGTGTAACACTTATATAGTGAAGATGCTGTAATTTTAACTGCAACTAATAAGGGTCTGGTTTTATCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTATCCGTATCTTTGGGATACACAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //