Array 1 67193-66371 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNPZ01000008.1 Escherichia coli 2-177-06_S4_C3 e217706S4C3.contig.7_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 67192 29 96.6 32 ............................A GGAACTGGCGCTGCTGGAGCAAAACCCGGTAT 67131 29 100.0 32 ............................. AAAAGGGCCGCATTGACGGCCCTGTGTTATCG 67070 29 100.0 32 ............................. TTAGCTGTTAGCCAAACATGTCGACCTGTTTG 67009 29 100.0 32 ............................. GGGTGGCGGTGGTGCTGTAATTCACACCGGTA 66948 29 100.0 32 ............................. TATTCCCCCAGTCCCCCCCGCCACCAAAATCA 66887 29 100.0 32 ............................. ATTTTTCAGACTCATCAAAATAATCCTTTAAT 66826 29 100.0 32 ............................. CATTGCCTTTGCAGCGTCTTTCCGATCATTCA 66765 29 100.0 32 ............................. AACGTGAGATACGCCTCCCAGCGGCGCTCGGT 66704 29 100.0 32 ............................. CCGTCAAACAGTATCACCGCGTTAACGCCCGC 66643 29 100.0 32 ............................. CCACACACGTCGAGCTGGTGGGGGTTAATGCT 66582 29 100.0 32 ............................. ACACCTCTACTGACGTTCCTGAACAAGAAGAT 66521 29 100.0 32 ............................. AAACCGGACGAGGGCGCGCTAAAACGTGATTA 66460 29 100.0 32 ............................. CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 66399 29 93.1 0 ..........T.................A | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.3 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATATTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATGTTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //