Array 1 32631-27670 **** Predicted by CRISPRDetect 2.4 *** >NZ_WELI01000008.1 Rudanella paleaurantiibacter strain HX-22-17 Scaffold6_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 32630 37 100.0 36 ..................................... GCTCTGTTTCGTGCGAGTTCTCGATGAGCAATGAAG 32557 37 100.0 38 ..................................... ATTAGTTTAGTACGGCACCGGCCAACGCCTGCCGTCCC 32482 37 100.0 36 ..................................... CTGTCGGCCACGCAACTCCCCGGTTTGAGGGTGTAT 32409 37 100.0 37 ..................................... AAAATCACCGGTCTAAGCTGGCTCAGGAACGGGCCGA 32335 37 100.0 36 ..................................... AATAGAAAAAACCGCGCTCGTGACGCGGTTCGGGGG 32262 37 100.0 38 ..................................... CCGCCGTTTGGTGGTGGCCCGCTTCATAACCCCTAACA 32187 37 100.0 36 ..................................... TACCTGAATGGGTAGGTAGGTGAGAATGTCCACGCC 32114 37 100.0 36 ..................................... GGTAGCCAGAACGCTTACCAAATCATCCTCGCTCAG 32041 37 100.0 36 ..................................... GCTCACCTCTGGGGCAATATTCCCCTCTACCCGCCA 31968 37 100.0 38 ..................................... TATACTGTTAACTATTGTTTGTCTGTAAACAGTAGATT 31893 37 100.0 37 ..................................... GACTTGAATCAGCCCTCAACTTTGTTGGGCGAAGGGG 31819 37 100.0 37 ..................................... CTCCGGATGTGGGTGACCGGCGTACATTGTTTGGTTG 31745 37 100.0 37 ..................................... ATTCTATCCATAGTGAAAAATGATCCACAAAAAAGAA 31671 37 100.0 36 ..................................... ACAAGGCCACCGGCAGCAATCAGACCCGCACCGGCT 31598 37 100.0 36 ..................................... AGAGTCAGGCAAACAGTACGCCGTATGCCGTTACCG 31525 37 100.0 35 ..................................... GAGTAGTATATCAATTGGTAGATTACTCGCTTTGG 31453 37 100.0 37 ..................................... ACCCCTGAATCATGTTGACAGCAGCTATTGCCGAATT 31379 37 100.0 36 ..................................... ATGACGTTTGCACCCCCGTCGGCCTACGGTCAGCAT 31306 37 100.0 35 ..................................... GGACAACCTAAAGTCCTATCAGCTTAGGGCCGCTG 31234 37 100.0 35 ..................................... CTTTTAACCAGCTTGACAATGCGGCCCTCTCCCCC 31162 37 100.0 40 ..................................... TTTGCGGTTGTCATGGTTCAATGGTTGCAGATGGTTAGTT 31085 37 100.0 37 ..................................... TAGAAGATCGACCGGGGATGAAGCTAACTTGGTAGAA 31011 37 100.0 37 ..................................... TGGCAGGGGAGATACCTCCGCCGATCTGGTGGACGCA 30937 37 100.0 37 ..................................... GAGAAAATACCGTGGGTAGCAATAAGGTGGACATCTT 30863 37 100.0 37 ..................................... TTATCCACATCAGCAAACTCGGGCGATGGGAATCAAG 30789 37 100.0 36 ..................................... GTAATGGGTCGTTTGGGAATCGGTTCGAAGATGATT 30716 37 100.0 37 ..................................... CCACGGTCTGGTTTCCTCCCGTGCGCTTGATGTTGTC 30642 37 100.0 37 ..................................... GTTACCTGCCGACAGGCAGCGTGTGTGTTAGTTAAGT 30568 37 100.0 37 ..................................... TTCACCACAAGGAATTAGGGCAAGTTGCCCGCATTTC 30494 37 100.0 36 ..................................... ATCTACATTAAATTACCAGTATGCCCAAAATTTACT 30421 37 100.0 38 ..................................... TAAAGCCAGATGGTTGGCACTCTACCGAACAAACAATA 30346 37 100.0 35 ..................................... TCGGAGAAATACGATTTAGATGTCCGTTTCGCTGA 30274 37 100.0 37 ..................................... GTATCAAACATTCAAATTACAATCACATGAATTCTCT 30200 37 100.0 36 ..................................... GTGTTAACAAGTGATTAGAGTGATCAAGTTGTGTAT 30127 37 100.0 36 ..................................... TTGATGCGGATGAAATTGTAAACGCAATGCGTTCTG 30054 37 100.0 39 ..................................... TGCTATATATTTGAAGCAAGTTCACCGGCAATAGTGCCA 29978 37 100.0 36 ..................................... CGTGACTAAAAATGCTACAGAAATGAAGCGTATTTT 29905 37 100.0 38 ..................................... TATAACAAATCTGTCCGGTATTGTATACCGGACAGATT 29830 37 100.0 36 ..................................... GCATAAGTCATAAATCGCTTCAGTCTAACCAGCGTT 29757 37 100.0 35 ..................................... TGCAATGGTTGGATTCACTTCCGGCTGGCGCTCGA 29685 37 100.0 36 ..................................... GCAAGCGCCGAATGTTGAACGGCTTATCTATTCGGC 29612 37 100.0 36 ..................................... CCCCATAGCACCGTTACCCGGTTAGCGGATGGAGTG 29539 37 100.0 36 ..................................... TATTAATAAGAAAGCCATAAAATGAAAAAACTACAC 29466 37 100.0 35 ..................................... CCCATATCCGGACACTCATTAAAGAAGTTGCGACT 29394 37 100.0 35 ..................................... CATGGTATTCGCCGTAATTTGAGTTCGGCTGTACA 29322 37 100.0 35 ..................................... TCATCAGTTTCTCTCCAAATAATCGACCGGATGGT 29250 37 100.0 37 ..................................... GACCTGAACGGCTTTCGCTAGTACCCGTTGCTGGTTT 29176 37 100.0 36 ..................................... CGGAGAATGCCGTCTACGCCCTCACGGACTCGCCCA 29103 37 100.0 37 ..................................... CGACCCTGTACGGCGTGTCGAAAGACTCAGTGAAATT 29029 37 100.0 36 ..................................... CGGATGTAGAAGAAACTTGGAATACGGGAAGGAGGA 28956 37 100.0 36 ..................................... TCGTGAGGGTCTCGCTCAGGTAGGGGAGTATGAACT 28883 37 100.0 35 ..................................... TTGGTTACGTAGCCAAACCGGGCTTTGGTCTGAGC 28811 37 100.0 36 ..................................... ATCGCATTTCTCGCTCTACTGAGCATTGCCGCTACC 28738 37 100.0 38 ..................................... CTACCTGCCCGTCGGTTAGGCTATAATATTGCTTCATC 28663 37 100.0 36 ..................................... CAGCACCCGGAACGTCGGCAAACAAATAATCCTCAA 28590 37 100.0 37 ..................................... TTCCCCGGCTCACCCCATCCCAAAAACAGACACAATG 28516 37 100.0 37 ..................................... ACGTGTTCAACTGGGAGAGTGCCGAACGGTTCGGTAA 28442 37 100.0 36 ..................................... TACCCCATCTGATGGGCGGACTACTGATTGTGTATG 28369 37 100.0 36 ..................................... GTCTCATGCACGACAAACACACGTTTTGGGCCGCAA 28296 37 100.0 36 ..................................... TCGAGTTCGGCCTTTGGCACCATGTCAACTTGCTCG 28223 37 100.0 37 ..................................... CGCAGGATCTGAGTGGCAACCCCATTTTAGCGGGGCA 28149 37 100.0 38 ..................................... TCGAAGAAAAGGAGGCCATTAAAGGGTAGGGGCTCGTA 28074 37 100.0 37 ..................................... TTACATAGTATTATGTAAGATATCCCACAGCCCCACT 28000 37 100.0 35 ..................................... TGCCCTAGGAACCGGCTTACCTCGCTCACAAAGCA 27928 37 100.0 36 ..................................... TGTGCCGGGGTCGCGGTTGGTCTTGGTGGCTTGCAG 27855 37 100.0 37 ..................................... CGGAGGAAGGCAACGCCCAATAGCAGGACGAAGAACC 27781 37 94.6 38 ..........A..........C............... AGATTTTTGGTGTCGTCACCTAAGTGATTCAAAAACCA 27706 37 94.6 0 ...............T.............G....... | ========== ====== ====== ====== ===================================== ======================================== ================== 68 37 99.8 37 GTCACTGACCTACATCCACGATAAGAAGGATTGAAAC # Left flank : TCGACACGAACAGGCCACACTCGGTATATCGGACGACCTGCTCGACTACCGGTTCGAGACACGCTGGATGGCCCTCAATCAGGCCAACTACCGCGATTACCAACGCTACTCGGAAGCCGAACGGGAAGCCCAACTCAAACGCATTCTGACGAGTCAGCTGCTGGCTACGTTCCGGGAGTTTGGGGTGTGGCTGGAACCCACGGAGCGGGTGATGGTCCGGCTGCGAACGGAGGAACACACTACCCAATTCAAAAACCAGACTATGGTGGTGTTTTCGGGGGGCTTCACTACCAACGTGGTGCTGCCCGATGGGCTGGGGCTGGGCAAGGCCGTGTCGCGGGGGTTTGGGACAATTTTAAAGAGCGAAAGAGTGAAAGAGTGAAAGACCGGCTCACGTCGCTCCGGCACTCCAGCTTTGCTCTTTCACTCTTTCGCCTTTCACTCTTTAACCCATGCAACTCCACATCACTACCTACGGAACCTACCTGCACATTTCCTAA # Right flank : GGCGATAGTGAGAATCCACTCAACCGCAACGCAACCAAATTAGTCATTTGGCCAATGGACGTACGCGGACTCCGACGGGGCGTCACCAGCCTTGATTCCCCCGCGATTTAGCCGTATTTTTGTGCTACTGTCAGATAGAAACTGACCCAAGCAAGCATGATTCATCAACTGTCGCTCTCGCTCACGCCTGAGCAAGCCTTCACCGACGCGACCTTCCGCGCCGAGGCCCTTCGCCAGCTCCGGCTTCCCGATTCACCCGACATTACGGTCCGTAAAAAACGCCAGTCTATCGACGCCCGCGGCCGTCAGGTACGCGTACACGTTGATACCGAGGTGTTTGTAAAGGAGGCCCCTACTCCATTGCTTCAGCACGGGTTGCACTACCCCAATGTAGCCAACGCCCAACCGGCCATTATTGTCGGGGCGGGGCCAGCGGGTTTATTTGCCGCCCTGCGTCTGATTGAGCTGGGCATTAAACCGATTATTCTGGAACGGGGTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTGACCTACATCCACGATAAGAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //