Array 1 84353-83294 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BIJH01000013.1 Klebsiella pneumoniae strain TUM14080 sequence13, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     84352	    29	  93.1	    32	............TG...............	ATCAGCCTGCGGGGTTCGGAGCTGCGTGTCTC	
     84291	    29	  93.1	    32	............TG...............	TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
     84230	    29	 100.0	    32	.............................	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
     84169	    29	 100.0	    32	.............................	TTACCAATGGGGAAAAATCTTCATTTGTAAAT	
     84108	    29	 100.0	    25	.............................	AACATCAGTGGAAATCCACTGCGGC       	Deletion [84055]
     84054	    29	  96.6	    32	......T......................	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
     83993	    29	  93.1	    32	............TG...............	CCGAGATTGATTAAAGCAAAGTAACGGCGGTG	
     83932	    29	 100.0	    32	.............................	CAGGTTATACTGGCAAAACGTCGATGGCTCTC	
     83871	    28	  93.1	    32	..........-..T...............	TAAATCAGCAAATATTGTTGTCTACCGTGTCG	
     83811	    29	  93.1	    32	............TC...............	AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG	
     83750	    29	  93.1	    32	............TG...............	TTAATGTTTTGTTAATTTATGAGTGTGGTGAT	
     83689	    29	  93.1	    32	............AC...............	AGCAAATCGAAAATCCGGCTGTTTGAAAAATG	C [83684]
     83627	    29	  89.7	    32	.............T.A............C	CATGAGCCTGCGCACTCTGACGCGCACCTGCT	CC [83620]
     83564	    29	 100.0	    32	.............................	CCGACCCGGTGCCCAGGAGAACTGGCTGAATA	
     83503	    29	  93.1	    31	.............G.A.............	TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 	
     83443	    29	  93.1	    32	...C......................T..	CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC	
     83382	    29	  96.6	    32	.............T...............	GGCATGAGCGAGAACCACTGCGAGAGTGTGGT	
     83321	    28	  86.2	     0	........T.A............-....A	|                               	
==========	======	======	======	=============================	================================	==================
        18	    29	  94.8	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGATAGCGTTAAAGAAACATTTAGCCGCGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTACTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACAAACAGTTTTAAACAGAACCAAAGCAGACTGGCAAGGTTACAGCGCCAGCTTGCCCGTAAAGTGAAATTCAGTGCGAACTGGAAGAAGCAGAAAGCAAGAAC

# Questionable array : NO	 Score: 5.39
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGTGTGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [22-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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